Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 USP9YP27-201ENST00000418455 438 ntBASIC1.23□□□□□ -2.21
PRKDCP78527 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.23□□□□□ -2.21
PRKDCP78527 AC009961.3-201ENST00000449832 765 ntBASIC1.23□□□□□ -2.21
PRKDCP78527 RPS29P29-201ENST00000456396 171 ntBASIC1.23□□□□□ -2.21
PRKDCP78527 AC019176.1-201ENST00000518519 225 ntBASIC1.23□□□□□ -2.21
PRKDCP78527 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.23□□□□□ -2.21
PRKDCP78527 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC1.23□□□□□ -2.21
PRKDCP78527 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC1.23□□□□□ -2.21
PRKDCP78527 AC091895.1-201ENST00000624494 256 ntBASIC1.23□□□□□ -2.21
PRKDCP78527 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
PRKDCP78527 RNY1P4-201ENST00000384595 115 ntBASIC1.22□□□□□ -2.21
PRKDCP78527 UBE2V1P6-201ENST00000430840 422 ntBASIC1.22□□□□□ -2.21
PRKDCP78527 XKRY2-201ENST00000442362 1093 ntBASIC1.22□□□□□ -2.21
PRKDCP78527 RPS27P5-201ENST00000444247 244 ntBASIC1.22□□□□□ -2.21
PRKDCP78527 AC034222.1-201ENST00000494052 532 ntBASIC1.22□□□□□ -2.21
PRKDCP78527 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
PRKDCP78527 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
PRKDCP78527 AL359273.1-201ENST00000510918 627 ntBASIC1.22□□□□□ -2.21
PRKDCP78527 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.22□□□□□ -2.21
PRKDCP78527 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.22□□□□□ -2.21
PRKDCP78527 AC107294.3-201ENST00000609211 526 ntBASIC1.22□□□□□ -2.21
PRKDCP78527 AC006023.2-201ENST00000609916 167 ntBASIC1.22□□□□□ -2.21
PRKDCP78527 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.22□□□□□ -2.21
PRKDCP78527 AL592437.2-201ENST00000421655 2434 ntBASIC1.22□□□□□ -2.21
PRKDCP78527 Z82195.2-201ENST00000612348 18351 ntBASIC1.22□□□□□ -2.21
PRKDCP78527 MFF-206ENST00000392059 1710 ntTSL 5 BASIC1.22□□□□□ -2.21
PRKDCP78527 NUP58P1-201ENST00000502546 1738 ntBASIC1.22□□□□□ -2.21
PRKDCP78527 MIR365B-201ENST00000362317 111 ntBASIC1.22□□□□□ -2.21
PRKDCP78527 RNU6-60P-201ENST00000364792 103 ntBASIC1.22□□□□□ -2.21
PRKDCP78527 RNA5SP338-201ENST00000410495 85 ntBASIC1.22□□□□□ -2.21
PRKDCP78527 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
PRKDCP78527 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.22□□□□□ -2.21
PRKDCP78527 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.22□□□□□ -2.21
PRKDCP78527 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.22□□□□□ -2.21
PRKDCP78527 AC114801.2-201ENST00000503825 781 ntBASIC1.22□□□□□ -2.21
PRKDCP78527 AC109464.2-201ENST00000510242 943 ntBASIC1.22□□□□□ -2.21
PRKDCP78527 SNORA31.11-201ENST00000516528 139 ntBASIC1.22□□□□□ -2.21
PRKDCP78527 MIR4716-201ENST00000579628 84 ntBASIC1.22□□□□□ -2.21
PRKDCP78527 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
PRKDCP78527 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC1.22□□□□□ -2.21
PRKDCP78527 ZNF720P1-201ENST00000562403 1939 ntBASIC1.22□□□□□ -2.21
PRKDCP78527 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.22□□□□□ -2.21
PRKDCP78527 AL590664.1-201ENST00000448065 339 ntBASIC1.22□□□□□ -2.21
PRKDCP78527 CFTRP1-201ENST00000456646 183 ntBASIC1.22□□□□□ -2.21
PRKDCP78527 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC1.22□□□□□ -2.21
PRKDCP78527 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC1.22□□□□□ -2.21
PRKDCP78527 Y_RNA.681-201ENST00000516445 113 ntBASIC1.22□□□□□ -2.21
PRKDCP78527 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.22□□□□□ -2.21
PRKDCP78527 AC024614.2-201ENST00000577584 372 ntBASIC1.22□□□□□ -2.21
PRKDCP78527 MTATP6P3-201ENST00000581686 676 ntBASIC1.22□□□□□ -2.21
PRKDCP78527 MIR3670-2-201ENST00000582974 65 ntBASIC1.22□□□□□ -2.21
PRKDCP78527 MIR3670-1-201ENST00000584160 65 ntBASIC1.22□□□□□ -2.21
PRKDCP78527 MIR3670-3-201ENST00000584855 65 ntBASIC1.22□□□□□ -2.21
PRKDCP78527 AC007687.1-201ENST00000602704 304 ntBASIC1.22□□□□□ -2.21
PRKDCP78527 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC1.22□□□□□ -2.21
PRKDCP78527 MIR3670-4-201ENST00000612260 65 ntBASIC1.22□□□□□ -2.21
PRKDCP78527 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
PRKDCP78527 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
PRKDCP78527 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC1.21□□□□□ -2.21
PRKDCP78527 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.21□□□□□ -2.21
PRKDCP78527 RPL23AP62-201ENST00000463396 453 ntBASIC1.21□□□□□ -2.21
PRKDCP78527 AC011712.1-201ENST00000588959 234 ntBASIC1.21□□□□□ -2.21
PRKDCP78527 MIR6788-201ENST00000618842 66 ntBASIC1.21□□□□□ -2.21
PRKDCP78527 SNORA26.7-201ENST00000391288 122 ntBASIC1.21□□□□□ -2.22
PRKDCP78527 RPL23AP20-201ENST00000447965 421 ntBASIC1.21□□□□□ -2.22
PRKDCP78527 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.21□□□□□ -2.22
PRKDCP78527 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
PRKDCP78527 EIF1AXP1-201ENST00000419267 435 ntBASIC1.21□□□□□ -2.22
PRKDCP78527 AC027673.1-201ENST00000456245 405 ntBASIC1.21□□□□□ -2.22
PRKDCP78527 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.21□□□□□ -2.22
PRKDCP78527 ATG10-AS1-201ENST00000504846 648 ntBASIC1.21□□□□□ -2.22
PRKDCP78527 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC1.21□□□□□ -2.22
PRKDCP78527 AL121821.2-201ENST00000556081 394 ntBASIC1.21□□□□□ -2.22
PRKDCP78527 RPS3AP23-202ENST00000574601 686 ntBASIC1.21□□□□□ -2.22
PRKDCP78527 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC1.21□□□□□ -2.22
PRKDCP78527 AC243773.3-201ENST00000613270 256 ntBASIC1.21□□□□□ -2.22
PRKDCP78527 U73479.1-201ENST00000618062 168 ntBASIC1.21□□□□□ -2.22
PRKDCP78527 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
PRKDCP78527 AC098679.5-201ENST00000624394 571 ntBASIC1.21□□□□□ -2.22
PRKDCP78527 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
PRKDCP78527 MIR520E-201ENST00000384867 87 ntBASIC1.21□□□□□ -2.22
PRKDCP78527 RNU6-882P-201ENST00000391025 103 ntBASIC1.21□□□□□ -2.22
PRKDCP78527 CALM1P1-201ENST00000442082 433 ntBASIC1.21□□□□□ -2.22
PRKDCP78527 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC1.21□□□□□ -2.22
PRKDCP78527 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC1.21□□□□□ -2.22
PRKDCP78527 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.21□□□□□ -2.22
PRKDCP78527 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.21□□□□□ -2.22
PRKDCP78527 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC1.21□□□□□ -2.22
PRKDCP78527 RNU4-41P-201ENST00000364426 143 ntBASIC1.2□□□□□ -2.22
PRKDCP78527 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.2□□□□□ -2.22
PRKDCP78527 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.2□□□□□ -2.22
PRKDCP78527 AC025033.1-201ENST00000463883 194 ntBASIC1.2□□□□□ -2.22
PRKDCP78527 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.2□□□□□ -2.22
PRKDCP78527 RNA5SP402-201ENST00000517148 110 ntBASIC1.2□□□□□ -2.22
PRKDCP78527 AC093331.1-201ENST00000521474 169 ntBASIC1.2□□□□□ -2.22
PRKDCP78527 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC1.2□□□□□ -2.22
PRKDCP78527 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
PRKDCP78527 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC1.2□□□□□ -2.22
PRKDCP78527 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC1.2□□□□□ -2.22
PRKDCP78527 AL031274.2-201ENST00000599419 203 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms