Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.57□□□□□ -2
TPM4P67936 AC114322.1-201ENST00000506771 926 ntBASIC2.57□□□□□ -2
TPM4P67936 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.57□□□□□ -2
TPM4P67936 AC113155.1-201ENST00000511141 769 ntBASIC2.57□□□□□ -2
TPM4P67936 AC021269.2-201ENST00000532318 330 ntBASIC2.57□□□□□ -2
TPM4P67936 GLYCAM1-201ENST00000546596 285 ntBASIC2.57□□□□□ -2
TPM4P67936 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.57□□□□□ -2
TPM4P67936 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.57□□□□□ -2
TPM4P67936 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.57□□□□□ -2
TPM4P67936 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
TPM4P67936 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
TPM4P67936 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TPM4P67936 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.57□□□□□ -2
TPM4P67936 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.56□□□□□ -2
TPM4P67936 AC073346.2-201ENST00000624724 2058 ntBASIC2.56□□□□□ -2
TPM4P67936 RNU6-77P-201ENST00000410554 91 ntBASIC2.56□□□□□ -2
TPM4P67936 RNU2-52P-201ENST00000410680 190 ntBASIC2.56□□□□□ -2
TPM4P67936 AC063976.3-201ENST00000426849 329 ntBASIC2.56□□□□□ -2
TPM4P67936 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.56□□□□□ -2
TPM4P67936 ZNF965P-201ENST00000432501 817 ntBASIC2.56□□□□□ -2
TPM4P67936 RPS15AP28-201ENST00000435088 386 ntBASIC2.56□□□□□ -2
TPM4P67936 HGF-207ENST00000453018 721 ntTSL 3 BASIC2.56□□□□□ -2
TPM4P67936 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.56□□□□□ -2
TPM4P67936 AC104435.1-201ENST00000483483 166 ntBASIC2.56□□□□□ -2
TPM4P67936 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.56□□□□□ -2
TPM4P67936 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.56□□□□□ -2
TPM4P67936 HMGB3P3-201ENST00000510526 400 ntBASIC2.56□□□□□ -2
TPM4P67936 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.56□□□□□ -2
TPM4P67936 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.56□□□□□ -2
TPM4P67936 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.56□□□□□ -2
TPM4P67936 AC087808.1-201ENST00000520501 361 ntBASIC2.56□□□□□ -2
TPM4P67936 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.56□□□□□ -2
TPM4P67936 AL451007.1-201ENST00000595491 289 ntBASIC2.56□□□□□ -2
TPM4P67936 BNIP3P4-201ENST00000604946 565 ntBASIC2.56□□□□□ -2
TPM4P67936 AC096577.2-201ENST00000611455 153 ntBASIC2.56□□□□□ -2
TPM4P67936 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.56□□□□□ -2
TPM4P67936 MIR6766-201ENST00000622641 72 ntBASIC2.56□□□□□ -2
TPM4P67936 AC091925.2-201ENST00000625059 256 ntBASIC2.56□□□□□ -2
TPM4P67936 MTCO1P6-201ENST00000481192 1384 ntBASIC2.56□□□□□ -2
TPM4P67936 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
TPM4P67936 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.56□□□□□ -2
TPM4P67936 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.56□□□□□ -2
TPM4P67936 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TPM4P67936 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.55□□□□□ -2
TPM4P67936 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TPM4P67936 RNU6-1155P-201ENST00000363554 107 ntBASIC2.55□□□□□ -2
TPM4P67936 MIR518C-201ENST00000384822 101 ntBASIC2.55□□□□□ -2
TPM4P67936 MIR196B-201ENST00000384852 84 ntBASIC2.55□□□□□ -2
TPM4P67936 AL589655.1-201ENST00000405398 482 ntBASIC2.55□□□□□ -2
TPM4P67936 RN7SKP140-201ENST00000411196 284 ntBASIC2.55□□□□□ -2
TPM4P67936 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.55□□□□□ -2
TPM4P67936 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.55□□□□□ -2
TPM4P67936 RPL23AP23-201ENST00000452590 471 ntBASIC2.55□□□□□ -2
TPM4P67936 AC087588.1-201ENST00000462203 316 ntBASIC2.55□□□□□ -2
TPM4P67936 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC2.55□□□□□ -2
TPM4P67936 AC109486.1-201ENST00000486833 374 ntBASIC2.55□□□□□ -2
TPM4P67936 AC090255.1-201ENST00000495779 349 ntBASIC2.55□□□□□ -2
TPM4P67936 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.55□□□□□ -2
TPM4P67936 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.55□□□□□ -2
TPM4P67936 ZNF705CP-201ENST00000530515 889 ntBASIC2.55□□□□□ -2
TPM4P67936 AC068339.2-201ENST00000534395 618 ntBASIC2.55□□□□□ -2
TPM4P67936 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.55□□□□□ -2
TPM4P67936 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.55□□□□□ -2
TPM4P67936 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.55□□□□□ -2
TPM4P67936 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.55□□□□□ -2
TPM4P67936 MIR4658-201ENST00000584344 65 ntBASIC2.55□□□□□ -2
TPM4P67936 AC007621.1-201ENST00000604544 437 ntBASIC2.55□□□□□ -2
TPM4P67936 AC007179.3-201ENST00000604976 235 ntBASIC2.55□□□□□ -2
TPM4P67936 OR2AS2P-201ENST00000606902 342 ntBASIC2.55□□□□□ -2
TPM4P67936 Z82209.1-201ENST00000422141 2135 ntBASIC2.54□□□□□ -2
TPM4P67936 SNORA68.1-201ENST00000364537 132 ntBASIC2.54□□□□□ -2
TPM4P67936 HMGB3P2-201ENST00000411913 584 ntBASIC2.54□□□□□ -2
TPM4P67936 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.54□□□□□ -2
TPM4P67936 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.54□□□□□ -2
TPM4P67936 AC090774.1-201ENST00000435925 246 ntBASIC2.54□□□□□ -2
TPM4P67936 UBE2V1P13-201ENST00000436983 439 ntBASIC2.54□□□□□ -2
TPM4P67936 AC107083.1-201ENST00000439643 279 ntBASIC2.54□□□□□ -2
TPM4P67936 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.54□□□□□ -2
TPM4P67936 RPL21P133-201ENST00000443666 476 ntBASIC2.54□□□□□ -2
TPM4P67936 snoU13.22-201ENST00000459428 104 ntBASIC2.54□□□□□ -2
TPM4P67936 AC079804.2-201ENST00000490376 200 ntBASIC2.54□□□□□ -2
TPM4P67936 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.54□□□□□ -2
TPM4P67936 RPL30P5-201ENST00000494923 336 ntBASIC2.54□□□□□ -2
TPM4P67936 AC093767.1-201ENST00000504523 156 ntBASIC2.54□□□□□ -2
TPM4P67936 AC002456.2-201ENST00000509356 380 ntBASIC2.54□□□□□ -2
TPM4P67936 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.54□□□□□ -2
TPM4P67936 RN7SKP132-201ENST00000516001 208 ntBASIC2.54□□□□□ -2
TPM4P67936 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.54□□□□□ -2
TPM4P67936 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.54□□□□□ -2
TPM4P67936 TRAV28-201ENST00000557548 323 ntBASIC2.54□□□□□ -2
TPM4P67936 AMZ2P1-203ENST00000565833 850 ntBASIC2.54□□□□□ -2
TPM4P67936 SNORD39.3-201ENST00000584451 71 ntBASIC2.54□□□□□ -2
TPM4P67936 VN1R90P-201ENST00000595717 726 ntBASIC2.54□□□□□ -2
TPM4P67936 AC005229.3-201ENST00000603438 323 ntBASIC2.54□□□□□ -2
TPM4P67936 AC006023.1-201ENST00000603944 259 ntBASIC2.54□□□□□ -2
TPM4P67936 AC103810.6-201ENST00000606708 136 ntBASIC2.54□□□□□ -2
TPM4P67936 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.54□□□□□ -2
TPM4P67936 AC004852.3-201ENST00000614131 326 ntBASIC2.54□□□□□ -2
TPM4P67936 AC073569.3-201ENST00000619055 682 ntBASIC2.54□□□□□ -2
TPM4P67936 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms