Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
UBA52P62987 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
UBA52P62987 RNA5SP160-201ENST00000364866 120 ntBASIC1.81□□□□□ -2.12
UBA52P62987 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
UBA52P62987 RPL17P12-201ENST00000413391 526 ntBASIC1.81□□□□□ -2.12
UBA52P62987 RPS15AP40-201ENST00000419621 391 ntBASIC1.81□□□□□ -2.12
UBA52P62987 Z98742.2-201ENST00000431564 187 ntBASIC1.81□□□□□ -2.12
UBA52P62987 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.81□□□□□ -2.12
UBA52P62987 AL031663.1-201ENST00000437445 219 ntBASIC1.81□□□□□ -2.12
UBA52P62987 AL603825.1-201ENST00000438481 80 ntBASIC1.81□□□□□ -2.12
UBA52P62987 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.81□□□□□ -2.12
UBA52P62987 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.81□□□□□ -2.12
UBA52P62987 AC010285.1-201ENST00000470580 392 ntBASIC1.81□□□□□ -2.12
UBA52P62987 RN7SL274P-201ENST00000492268 272 ntBASIC1.81□□□□□ -2.12
UBA52P62987 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
UBA52P62987 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
UBA52P62987 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.81□□□□□ -2.12
UBA52P62987 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.81□□□□□ -2.12
UBA52P62987 AC025423.2-201ENST00000537570 439 ntBASIC1.81□□□□□ -2.12
UBA52P62987 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.81□□□□□ -2.12
UBA52P62987 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.81□□□□□ -2.12
UBA52P62987 RPS3AP23-202ENST00000574601 686 ntBASIC1.81□□□□□ -2.12
UBA52P62987 AC115085.1-201ENST00000588924 229 ntBASIC1.81□□□□□ -2.12
UBA52P62987 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.81□□□□□ -2.12
UBA52P62987 AC025811.1-201ENST00000604312 472 ntBASIC1.81□□□□□ -2.12
UBA52P62987 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.81□□□□□ -2.12
UBA52P62987 AL353997.5-201ENST00000618886 171 ntBASIC1.81□□□□□ -2.12
UBA52P62987 AL031601.2-202ENST00000622650 282 ntBASIC1.81□□□□□ -2.12
UBA52P62987 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
UBA52P62987 MTCO1P9-201ENST00000505577 1534 ntBASIC1.81□□□□□ -2.12
UBA52P62987 KPNA2P1-201ENST00000458289 1591 ntBASIC1.81□□□□□ -2.12
UBA52P62987 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.8□□□□□ -2.12
UBA52P62987 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
UBA52P62987 SNORA64-201ENST00000384674 134 ntBASIC1.8□□□□□ -2.12
UBA52P62987 MIR221-201ENST00000385135 110 ntBASIC1.8□□□□□ -2.12
UBA52P62987 GSTA9P-201ENST00000406231 611 ntBASIC1.8□□□□□ -2.12
UBA52P62987 SNORA11.4-201ENST00000408823 129 ntBASIC1.8□□□□□ -2.12
UBA52P62987 RNU2-21P-201ENST00000410368 188 ntBASIC1.8□□□□□ -2.12
UBA52P62987 MTCYBP24-201ENST00000420387 1106 ntBASIC1.8□□□□□ -2.12
UBA52P62987 MTCO3P30-201ENST00000426425 670 ntBASIC1.8□□□□□ -2.12
UBA52P62987 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.8□□□□□ -2.12
UBA52P62987 AL451074.3-201ENST00000437709 472 ntBASIC1.8□□□□□ -2.12
UBA52P62987 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.8□□□□□ -2.12
UBA52P62987 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.8□□□□□ -2.12
UBA52P62987 AL139109.1-201ENST00000455491 297 ntBASIC1.8□□□□□ -2.12
UBA52P62987 SETP11-201ENST00000473027 690 ntBASIC1.8□□□□□ -2.12
UBA52P62987 MTCO2P9-201ENST00000503214 694 ntBASIC1.8□□□□□ -2.12
UBA52P62987 AC116337.1-201ENST00000509680 687 ntBASIC1.8□□□□□ -2.12
UBA52P62987 AP003717.3-201ENST00000544832 1180 ntBASIC1.8□□□□□ -2.12
UBA52P62987 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.8□□□□□ -2.12
UBA52P62987 AL356280.1-201ENST00000603614 379 ntBASIC1.8□□□□□ -2.12
UBA52P62987 AC009570.1-201ENST00000609599 745 ntBASIC1.8□□□□□ -2.12
UBA52P62987 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
UBA52P62987 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
UBA52P62987 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
UBA52P62987 AC097714.1-201ENST00000511272 1647 ntBASIC1.8□□□□□ -2.12
UBA52P62987 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC1.8□□□□□ -2.12
UBA52P62987 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
UBA52P62987 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.8□□□□□ -2.12
UBA52P62987 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.79□□□□□ -2.12
UBA52P62987 HMGB1P5-201ENST00000255320 642 ntBASIC1.79□□□□□ -2.12
UBA52P62987 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
UBA52P62987 RNU6-76P-201ENST00000384060 104 ntBASIC1.79□□□□□ -2.12
UBA52P62987 SUMO2P12-201ENST00000405924 140 ntBASIC1.79□□□□□ -2.12
UBA52P62987 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.79□□□□□ -2.12
UBA52P62987 AL030996.1-201ENST00000411430 235 ntBASIC1.79□□□□□ -2.12
UBA52P62987 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.79□□□□□ -2.12
UBA52P62987 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.79□□□□□ -2.12
UBA52P62987 AC005005.2-201ENST00000420779 380 ntBASIC1.79□□□□□ -2.12
UBA52P62987 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.79□□□□□ -2.12
UBA52P62987 AC010881.1-201ENST00000433830 235 ntBASIC1.79□□□□□ -2.12
UBA52P62987 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.79□□□□□ -2.12
UBA52P62987 AC078857.1-201ENST00000469870 667 ntBASIC1.79□□□□□ -2.12
UBA52P62987 AL135752.1-201ENST00000479477 471 ntBASIC1.79□□□□□ -2.12
UBA52P62987 OR5AQ1P-201ENST00000527596 927 ntBASIC1.79□□□□□ -2.12
UBA52P62987 AC018630.1-201ENST00000541376 925 ntBASIC1.79□□□□□ -2.12
UBA52P62987 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.79□□□□□ -2.12
UBA52P62987 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.79□□□□□ -2.12
UBA52P62987 MIR5002-201ENST00000584713 97 ntBASIC1.79□□□□□ -2.12
UBA52P62987 AC009977.1-201ENST00000586015 570 ntBASIC1.79□□□□□ -2.12
UBA52P62987 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.79□□□□□ -2.12
UBA52P62987 U73479.1-201ENST00000618062 168 ntBASIC1.79□□□□□ -2.12
UBA52P62987 MIR219B-201ENST00000637023 88 ntBASIC1.79□□□□□ -2.12
UBA52P62987 AC008432.1-201ENST00000615912 1320 ntBASIC1.79□□□□□ -2.12
UBA52P62987 AC011460.1-201ENST00000636268 1834 ntBASIC1.79□□□□□ -2.12
UBA52P62987 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
UBA52P62987 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
UBA52P62987 AC009902.3-201ENST00000606235 2172 ntBASIC1.78□□□□□ -2.12
UBA52P62987 ZNF37BP-203ENST00000452306 1352 ntBASIC1.78□□□□□ -2.12
UBA52P62987 AL356379.1-201ENST00000414105 126 ntBASIC1.78□□□□□ -2.12
UBA52P62987 RPL21P32-201ENST00000419877 477 ntBASIC1.78□□□□□ -2.12
UBA52P62987 AL121882.1-201ENST00000422893 417 ntBASIC1.78□□□□□ -2.12
UBA52P62987 UBE2FP3-201ENST00000436366 524 ntBASIC1.78□□□□□ -2.12
UBA52P62987 MTCO3P11-201ENST00000455103 774 ntBASIC1.78□□□□□ -2.12
UBA52P62987 RNA5SP310-201ENST00000459084 116 ntBASIC1.78□□□□□ -2.12
UBA52P62987 NFU1-207ENST00000462320 558 ntTSL 4 BASIC1.78□□□□□ -2.12
UBA52P62987 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.78□□□□□ -2.12
UBA52P62987 SYPL1P1-201ENST00000473622 768 ntBASIC1.78□□□□□ -2.12
UBA52P62987 RPL30P14-201ENST00000482744 348 ntBASIC1.78□□□□□ -2.12
UBA52P62987 FAM172BP-201ENST00000487497 1089 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms