Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN2P57739 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CLDN2P57739 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN2P57739 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.66□□□□□ -1.82
CLDN2P57739 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.66□□□□□ -1.82
CLDN2P57739 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN2P57739 RNA5SP235-201ENST00000365411 114 ntBASIC3.66□□□□□ -1.82
CLDN2P57739 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN2P57739 RNU6-629P-201ENST00000384061 103 ntBASIC3.66□□□□□ -1.82
CLDN2P57739 RNU6-1181P-201ENST00000384191 106 ntBASIC3.66□□□□□ -1.82
CLDN2P57739 MIR135A2-201ENST00000384854 100 ntBASIC3.66□□□□□ -1.82
CLDN2P57739 MIR183-201ENST00000384958 110 ntBASIC3.66□□□□□ -1.82
CLDN2P57739 MIR218-2-201ENST00000385006 110 ntBASIC3.66□□□□□ -1.82
CLDN2P57739 RNA5SP424-201ENST00000390988 115 ntBASIC3.66□□□□□ -1.82
CLDN2P57739 MRPL42P2-201ENST00000403169 426 ntBASIC3.66□□□□□ -1.82
CLDN2P57739 AL121834.1-202ENST00000404494 277 ntBASIC3.66□□□□□ -1.82
CLDN2P57739 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.66□□□□□ -1.82
CLDN2P57739 AC073614.1-201ENST00000438690 650 ntBASIC3.66□□□□□ -1.82
CLDN2P57739 AL031667.1-201ENST00000440222 725 ntBASIC3.66□□□□□ -1.82
CLDN2P57739 RAC1P7-201ENST00000445367 377 ntBASIC3.66□□□□□ -1.82
CLDN2P57739 PRDX3P3-201ENST00000447765 522 ntBASIC3.66□□□□□ -1.82
CLDN2P57739 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.66□□□□□ -1.82
CLDN2P57739 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.66□□□□□ -1.82
CLDN2P57739 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN2P57739 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN2P57739 NDUFB4P2-201ENST00000509515 391 ntBASIC3.66□□□□□ -1.82
CLDN2P57739 AC023141.12-201ENST00000512399 199 ntBASIC3.66□□□□□ -1.82
CLDN2P57739 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN2P57739 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN2P57739 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN2P57739 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
CLDN2P57739 Y_RNA.672-201ENST00000516289 104 ntBASIC3.66□□□□□ -1.82
CLDN2P57739 SNORA31.20-201ENST00000517111 133 ntBASIC3.66□□□□□ -1.82
CLDN2P57739 AP003122.4-201ENST00000530980 758 ntBASIC3.66□□□□□ -1.82
CLDN2P57739 OR5B10P-201ENST00000532869 642 ntBASIC3.66□□□□□ -1.82
CLDN2P57739 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN2P57739 AC123904.2-201ENST00000548059 300 ntBASIC3.66□□□□□ -1.82
CLDN2P57739 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN2P57739 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.66□□□□□ -1.82
CLDN2P57739 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN2P57739 OR4K8P-201ENST00000578842 1048 ntBASIC3.66□□□□□ -1.82
CLDN2P57739 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.66□□□□□ -1.82
CLDN2P57739 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN2P57739 NRBF2P1-201ENST00000587407 859 ntBASIC3.66□□□□□ -1.82
CLDN2P57739 HMGN1P30-201ENST00000589286 268 ntBASIC3.66□□□□□ -1.82
CLDN2P57739 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.66□□□□□ -1.82
CLDN2P57739 AP001429.1-201ENST00000602568 530 ntBASIC3.66□□□□□ -1.82
CLDN2P57739 AC015871.2-201ENST00000603605 948 ntBASIC3.66□□□□□ -1.82
CLDN2P57739 AC010591.1-201ENST00000603941 649 ntBASIC3.66□□□□□ -1.82
CLDN2P57739 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.66□□□□□ -1.82
CLDN2P57739 AC015540.1-201ENST00000615828 501 ntBASIC3.66□□□□□ -1.82
CLDN2P57739 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.66□□□□□ -1.82
CLDN2P57739 AL138713.1-201ENST00000624026 2130 ntBASIC3.66□□□□□ -1.82
CLDN2P57739 U6.105-201ENST00000637379 88 ntBASIC3.66□□□□□ -1.82
CLDN2P57739 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CLDN2P57739 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.66□□□□□ -1.82
CLDN2P57739 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN2P57739 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
CLDN2P57739 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN2P57739 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.65□□□□□ -1.82
CLDN2P57739 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CLDN2P57739 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.82
CLDN2P57739 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
CLDN2P57739 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.65□□□□□ -1.82
CLDN2P57739 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.65□□□□□ -1.82
CLDN2P57739 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CLDN2P57739 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN2P57739 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN2P57739 SNORD9-201ENST00000362566 104 ntBASIC3.65□□□□□ -1.83
CLDN2P57739 RNU6-637P-201ENST00000384050 107 ntBASIC3.65□□□□□ -1.83
CLDN2P57739 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN2P57739 CCNG1P1-201ENST00000406783 885 ntBASIC3.65□□□□□ -1.83
CLDN2P57739 RNU6-516P-201ENST00000411381 104 ntBASIC3.65□□□□□ -1.83
CLDN2P57739 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.65□□□□□ -1.83
CLDN2P57739 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.65□□□□□ -1.83
CLDN2P57739 AC073063.1-201ENST00000434352 607 ntBASIC3.65□□□□□ -1.83
CLDN2P57739 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.65□□□□□ -1.83
CLDN2P57739 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN2P57739 MTND1P34-201ENST00000438556 671 ntBASIC3.65□□□□□ -1.83
CLDN2P57739 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.65□□□□□ -1.83
CLDN2P57739 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.65□□□□□ -1.83
CLDN2P57739 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.65□□□□□ -1.83
CLDN2P57739 TPT1P7-201ENST00000458300 517 ntBASIC3.65□□□□□ -1.83
CLDN2P57739 KLF3P2-201ENST00000465138 268 ntBASIC3.65□□□□□ -1.83
CLDN2P57739 TRBV12-2-201ENST00000489763 344 ntBASIC3.65□□□□□ -1.83
CLDN2P57739 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN2P57739 AC022483.1-201ENST00000514020 567 ntBASIC3.65□□□□□ -1.83
CLDN2P57739 RN7SKP13-201ENST00000515933 244 ntBASIC3.65□□□□□ -1.83
CLDN2P57739 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.65□□□□□ -1.83
CLDN2P57739 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.65□□□□□ -1.83
CLDN2P57739 COX6CP3-201ENST00000580869 223 ntBASIC3.65□□□□□ -1.83
CLDN2P57739 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
CLDN2P57739 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.65□□□□□ -1.83
CLDN2P57739 AC146944.4-201ENST00000602697 718 ntBASIC3.65□□□□□ -1.83
CLDN2P57739 AC091805.2-201ENST00000603848 235 ntBASIC3.65□□□□□ -1.83
CLDN2P57739 Z99129.1-201ENST00000612510 255 ntBASIC3.65□□□□□ -1.83
CLDN2P57739 AL359740.1-201ENST00000624340 592 ntBASIC3.65□□□□□ -1.83
CLDN2P57739 PISRT1-201ENST00000626175 531 ntBASIC3.65□□□□□ -1.83
CLDN2P57739 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN2P57739 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms