Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.54□□□□□ -1.84
LIMK1P53667 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.54□□□□□ -1.84
LIMK1P53667 Y_RNA.717-201ENST00000517106 92 ntBASIC3.54□□□□□ -1.84
LIMK1P53667 COX6CP8-201ENST00000522620 226 ntBASIC3.54□□□□□ -1.84
LIMK1P53667 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
LIMK1P53667 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.54□□□□□ -1.84
LIMK1P53667 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.54□□□□□ -1.84
LIMK1P53667 AC005951.1-201ENST00000576706 485 ntBASIC3.54□□□□□ -1.84
LIMK1P53667 MIR5680-201ENST00000577577 84 ntBASIC3.54□□□□□ -1.84
LIMK1P53667 FAM60BP-201ENST00000578364 658 ntBASIC3.54□□□□□ -1.84
LIMK1P53667 MIR4738-201ENST00000579134 87 ntBASIC3.54□□□□□ -1.84
LIMK1P53667 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.54□□□□□ -1.84
LIMK1P53667 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.54□□□□□ -1.84
LIMK1P53667 AC106028.5-201ENST00000610332 395 ntBASIC3.54□□□□□ -1.84
LIMK1P53667 AL590099.1-201ENST00000615276 138 ntBASIC3.54□□□□□ -1.84
LIMK1P53667 AC009464.1-201ENST00000615731 469 ntBASIC3.54□□□□□ -1.84
LIMK1P53667 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LIMK1P53667 MIR6076-201ENST00000617521 113 ntBASIC3.54□□□□□ -1.84
LIMK1P53667 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.54□□□□□ -1.84
LIMK1P53667 AC009039.2-201ENST00000624524 529 ntBASIC3.54□□□□□ -1.84
LIMK1P53667 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.54□□□□□ -1.84
LIMK1P53667 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.54□□□□□ -1.84
LIMK1P53667 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.54□□□□□ -1.84
LIMK1P53667 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LIMK1P53667 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LIMK1P53667 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LIMK1P53667 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LIMK1P53667 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LIMK1P53667 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
LIMK1P53667 RNA5SP374-201ENST00000362939 125 ntBASIC3.53□□□□□ -1.84
LIMK1P53667 RNU6-97P-201ENST00000363387 104 ntBASIC3.53□□□□□ -1.84
LIMK1P53667 SNORA80A-201ENST00000363922 136 ntBASIC3.53□□□□□ -1.84
LIMK1P53667 RNU6-173P-201ENST00000364215 104 ntBASIC3.53□□□□□ -1.84
LIMK1P53667 FAT1P1-201ENST00000406588 507 ntBASIC3.53□□□□□ -1.84
LIMK1P53667 HSPE1P8-201ENST00000406997 288 ntBASIC3.53□□□□□ -1.84
LIMK1P53667 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LIMK1P53667 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.53□□□□□ -1.84
LIMK1P53667 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.53□□□□□ -1.84
LIMK1P53667 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.53□□□□□ -1.84
LIMK1P53667 YWHAZP7-201ENST00000436906 631 ntBASIC3.53□□□□□ -1.84
LIMK1P53667 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.53□□□□□ -1.84
LIMK1P53667 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.53□□□□□ -1.84
LIMK1P53667 AL671855.1-201ENST00000446875 1203 ntBASIC3.53□□□□□ -1.84
LIMK1P53667 MTND1P31-201ENST00000449206 961 ntBASIC3.53□□□□□ -1.84
LIMK1P53667 AC093663.1-201ENST00000497190 394 ntBASIC3.53□□□□□ -1.84
LIMK1P53667 AC093677.1-201ENST00000514414 678 ntBASIC3.53□□□□□ -1.84
LIMK1P53667 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LIMK1P53667 AP000926.4-201ENST00000527351 454 ntBASIC3.53□□□□□ -1.84
LIMK1P53667 ZNF321P-202ENST00000550843 495 ntBASIC3.53□□□□□ -1.84
LIMK1P53667 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.53□□□□□ -1.84
LIMK1P53667 AC034105.3-201ENST00000565294 442 ntBASIC3.53□□□□□ -1.84
LIMK1P53667 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.53□□□□□ -1.84
LIMK1P53667 OR4K8P-201ENST00000578842 1048 ntBASIC3.53□□□□□ -1.84
LIMK1P53667 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.53□□□□□ -1.84
LIMK1P53667 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.53□□□□□ -1.84
LIMK1P53667 AL606834.2-201ENST00000602954 668 ntBASIC3.53□□□□□ -1.84
LIMK1P53667 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.53□□□□□ -1.84
LIMK1P53667 AL365503.1-201ENST00000605247 905 ntBASIC3.53□□□□□ -1.84
LIMK1P53667 BRDTP1-201ENST00000605735 677 ntBASIC3.53□□□□□ -1.84
LIMK1P53667 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.53□□□□□ -1.84
LIMK1P53667 AC091304.6-201ENST00000619761 202 ntBASIC3.53□□□□□ -1.84
LIMK1P53667 AC006386.2-201ENST00000624491 75 ntBASIC3.53□□□□□ -1.84
LIMK1P53667 AC012005.1-201ENST00000624575 75 ntBASIC3.53□□□□□ -1.84
LIMK1P53667 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.53□□□□□ -1.84
LIMK1P53667 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LIMK1P53667 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LIMK1P53667 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
LIMK1P53667 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LIMK1P53667 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.52□□□□□ -1.85
LIMK1P53667 CEP170P1-201ENST00000502249 4587 ntBASIC3.52□□□□□ -1.85
LIMK1P53667 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LIMK1P53667 RPL21P132-201ENST00000331267 462 ntBASIC3.52□□□□□ -1.85
LIMK1P53667 Y_RNA.18-201ENST00000362461 102 ntBASIC3.52□□□□□ -1.85
LIMK1P53667 RNU6-723P-201ENST00000383973 107 ntBASIC3.52□□□□□ -1.85
LIMK1P53667 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.52□□□□□ -1.85
LIMK1P53667 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LIMK1P53667 AL356421.1-201ENST00000403255 413 ntBASIC3.52□□□□□ -1.85
LIMK1P53667 RN7SKP111-201ENST00000410349 271 ntBASIC3.52□□□□□ -1.85
LIMK1P53667 RPS15AP38-201ENST00000413110 372 ntBASIC3.52□□□□□ -1.85
LIMK1P53667 MRPL50P2-201ENST00000416821 482 ntBASIC3.52□□□□□ -1.85
LIMK1P53667 AC098592.1-201ENST00000419352 333 ntBASIC3.52□□□□□ -1.85
LIMK1P53667 AC005005.2-201ENST00000420779 380 ntBASIC3.52□□□□□ -1.85
LIMK1P53667 BEND7P1-201ENST00000422058 457 ntBASIC3.52□□□□□ -1.85
LIMK1P53667 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.52□□□□□ -1.85
LIMK1P53667 TXNL1P1-201ENST00000429528 554 ntBASIC3.52□□□□□ -1.85
LIMK1P53667 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.52□□□□□ -1.85
LIMK1P53667 AC006028.1-201ENST00000438379 402 ntBASIC3.52□□□□□ -1.85
LIMK1P53667 RNA5SP310-201ENST00000459084 116 ntBASIC3.52□□□□□ -1.85
LIMK1P53667 AC096576.1-201ENST00000489014 359 ntBASIC3.52□□□□□ -1.85
LIMK1P53667 AC111000.2-201ENST00000507775 550 ntBASIC3.52□□□□□ -1.85
LIMK1P53667 RAC1P2-201ENST00000511164 579 ntBASIC3.52□□□□□ -1.85
LIMK1P53667 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.52□□□□□ -1.85
LIMK1P53667 AC118465.1-201ENST00000513820 1271 ntBASIC3.52□□□□□ -1.85
LIMK1P53667 AC103783.1-201ENST00000520506 373 ntBASIC3.52□□□□□ -1.85
LIMK1P53667 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.52□□□□□ -1.85
LIMK1P53667 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.52□□□□□ -1.85
LIMK1P53667 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.52□□□□□ -1.85
LIMK1P53667 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.52□□□□□ -1.85
LIMK1P53667 MIR4276-201ENST00000584832 70 ntBASIC3.52□□□□□ -1.85
LIMK1P53667 AL451007.1-201ENST00000595491 289 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms