Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC1.67□□□□□ -2.14
BRCA2P51587 RPL30P3-201ENST00000424262 333 ntBASIC1.67□□□□□ -2.14
BRCA2P51587 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.67□□□□□ -2.14
BRCA2P51587 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC1.67□□□□□ -2.14
BRCA2P51587 AC007687.1-201ENST00000602704 304 ntBASIC1.67□□□□□ -2.14
BRCA2P51587 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.67□□□□□ -2.14
BRCA2P51587 RPL31P2-201ENST00000413849 377 ntBASIC1.67□□□□□ -2.14
BRCA2P51587 snoU13.3-201ENST00000459441 104 ntBASIC1.67□□□□□ -2.14
BRCA2P51587 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
BRCA2P51587 FABP5P5-201ENST00000515537 406 ntBASIC1.67□□□□□ -2.14
BRCA2P51587 AC087373.1-201ENST00000524920 491 ntBASIC1.67□□□□□ -2.14
BRCA2P51587 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.67□□□□□ -2.14
BRCA2P51587 AL845331.3-202ENST00000562856 261 ntBASIC1.67□□□□□ -2.14
BRCA2P51587 MIR5000-201ENST00000577717 103 ntBASIC1.67□□□□□ -2.14
BRCA2P51587 Y_RNA.115-201ENST00000363272 98 ntBASIC1.66□□□□□ -2.14
BRCA2P51587 AC084851.1-201ENST00000529105 249 ntBASIC1.66□□□□□ -2.14
BRCA2P51587 AC023825.1-201ENST00000566704 1030 ntBASIC1.66□□□□□ -2.14
BRCA2P51587 MIR4419B-201ENST00000577260 68 ntBASIC1.66□□□□□ -2.14
BRCA2P51587 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
BRCA2P51587 STMN1P1-201ENST00000617809 440 ntBASIC1.66□□□□□ -2.14
BRCA2P51587 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC1.66□□□□□ -2.14
BRCA2P51587 AC021087.2-201ENST00000504656 1203 ntBASIC1.66□□□□□ -2.14
BRCA2P51587 RNU6-405P-201ENST00000516637 110 ntBASIC1.66□□□□□ -2.14
BRCA2P51587 RNU6-467P-201ENST00000517027 110 ntBASIC1.66□□□□□ -2.14
BRCA2P51587 SNORA31.24-201ENST00000517232 57 ntBASIC1.66□□□□□ -2.14
BRCA2P51587 SULT1C2P1-202ENST00000562418 459 ntBASIC1.66□□□□□ -2.14
BRCA2P51587 AC112191.3-201ENST00000604371 277 ntBASIC1.66□□□□□ -2.14
BRCA2P51587 AL627230.5-201ENST00000619807 58 ntBASIC1.66□□□□□ -2.14
BRCA2P51587 RNA5SP296-201ENST00000410523 111 ntBASIC1.66□□□□□ -2.14
BRCA2P51587 CKS1BP5-201ENST00000434172 273 ntBASIC1.66□□□□□ -2.14
BRCA2P51587 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.66□□□□□ -2.14
BRCA2P51587 AL592494.3-201ENST00000609485 464 ntBASIC1.66□□□□□ -2.14
BRCA2P51587 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
BRCA2P51587 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC1.65□□□□□ -2.14
BRCA2P51587 MTCO3P44-201ENST00000510977 541 ntBASIC1.65□□□□□ -2.14
BRCA2P51587 BNIP3P4-201ENST00000604946 565 ntBASIC1.65□□□□□ -2.14
BRCA2P51587 AC034102.8-201ENST00000615146 484 ntBASIC1.65□□□□□ -2.14
BRCA2P51587 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
BRCA2P51587 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
BRCA2P51587 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
BRCA2P51587 HIGD1AP11-201ENST00000438361 280 ntBASIC1.65□□□□□ -2.15
BRCA2P51587 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC1.65□□□□□ -2.15
BRCA2P51587 PWAR6-201ENST00000552334 4618 ntBASIC1.65□□□□□ -2.15
BRCA2P51587 AC090774.1-201ENST00000435925 246 ntBASIC1.65□□□□□ -2.15
BRCA2P51587 RPL23AP44-201ENST00000482216 473 ntBASIC1.65□□□□□ -2.15
BRCA2P51587 AC021382.1-201ENST00000483523 359 ntBASIC1.65□□□□□ -2.15
BRCA2P51587 RNA5SP395-201ENST00000516567 118 ntBASIC1.65□□□□□ -2.15
BRCA2P51587 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC1.65□□□□□ -2.15
BRCA2P51587 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.15
BRCA2P51587 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
BRCA2P51587 MTCO3P31-201ENST00000405526 789 ntBASIC1.64□□□□□ -2.15
BRCA2P51587 AF274854.1-201ENST00000413236 615 ntBASIC1.64□□□□□ -2.15
BRCA2P51587 AC079776.3-201ENST00000450665 370 ntBASIC1.64□□□□□ -2.15
BRCA2P51587 RFC5P1-201ENST00000454419 874 ntBASIC1.64□□□□□ -2.15
BRCA2P51587 SEPT7P3-201ENST00000455017 621 ntBASIC1.64□□□□□ -2.15
BRCA2P51587 SNORA31.11-201ENST00000516528 139 ntBASIC1.64□□□□□ -2.15
BRCA2P51587 MIR3660-201ENST00000584845 100 ntBASIC1.64□□□□□ -2.15
BRCA2P51587 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.64□□□□□ -2.15
BRCA2P51587 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
BRCA2P51587 SNORA70.7-201ENST00000384159 133 ntBASIC1.64□□□□□ -2.15
BRCA2P51587 AL513185.2-201ENST00000425543 193 ntBASIC1.64□□□□□ -2.15
BRCA2P51587 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.64□□□□□ -2.15
BRCA2P51587 MIR3186-201ENST00000577404 85 ntBASIC1.64□□□□□ -2.15
BRCA2P51587 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.64□□□□□ -2.15
BRCA2P51587 AC022513.1-201ENST00000624512 117 ntBASIC1.64□□□□□ -2.15
BRCA2P51587 AC097634.1-201ENST00000604491 2467 ntBASIC1.64□□□□□ -2.15
BRCA2P51587 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.64□□□□□ -2.15
BRCA2P51587 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
BRCA2P51587 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.63□□□□□ -2.15
BRCA2P51587 THAP5P1-201ENST00000439089 262 ntBASIC1.63□□□□□ -2.15
BRCA2P51587 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
BRCA2P51587 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
BRCA2P51587 AC021146.7-201ENST00000509604 775 ntBASIC1.63□□□□□ -2.15
BRCA2P51587 USP9YP5-201ENST00000511770 630 ntBASIC1.63□□□□□ -2.15
BRCA2P51587 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC1.63□□□□□ -2.15
BRCA2P51587 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
BRCA2P51587 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.63□□□□□ -2.15
BRCA2P51587 AC096772.1-201ENST00000609146 564 ntBASIC1.63□□□□□ -2.15
BRCA2P51587 AC099654.11-201ENST00000638857 294 ntBASIC1.63□□□□□ -2.15
BRCA2P51587 FAM35CP-201ENST00000554755 2470 ntBASIC1.63□□□□□ -2.15
BRCA2P51587 ZNF542P-204ENST00000482727 1305 ntBASIC1.63□□□□□ -2.15
BRCA2P51587 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.63□□□□□ -2.15
BRCA2P51587 AL596028.1-201ENST00000326971 197 ntBASIC1.63□□□□□ -2.15
BRCA2P51587 RNA5SP138-201ENST00000365098 114 ntBASIC1.63□□□□□ -2.15
BRCA2P51587 FNDC3CP-201ENST00000420795 1155 ntBASIC1.63□□□□□ -2.15
BRCA2P51587 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
BRCA2P51587 AC004223.1-201ENST00000479840 271 ntBASIC1.63□□□□□ -2.15
BRCA2P51587 AC023813.2-201ENST00000564321 469 ntBASIC1.63□□□□□ -2.15
BRCA2P51587 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.63□□□□□ -2.15
BRCA2P51587 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.62□□□□□ -2.15
BRCA2P51587 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
BRCA2P51587 RPS3AP44-201ENST00000425466 790 ntBASIC1.62□□□□□ -2.15
BRCA2P51587 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.62□□□□□ -2.15
BRCA2P51587 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
BRCA2P51587 RPL39P40-201ENST00000445481 146 ntBASIC1.62□□□□□ -2.15
BRCA2P51587 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.62□□□□□ -2.15
BRCA2P51587 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
BRCA2P51587 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
BRCA2P51587 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
BRCA2P51587 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms