Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 SAR1AP4-201ENST00000429225 591 ntBASIC2.71□□□□□ -1.98
RFX3P48380 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.71□□□□□ -1.98
RFX3P48380 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.71□□□□□ -1.98
RFX3P48380 AC092573.2-201ENST00000434546 243 ntBASIC2.71□□□□□ -1.98
RFX3P48380 RPL23AP74-201ENST00000437246 471 ntBASIC2.71□□□□□ -1.98
RFX3P48380 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.71□□□□□ -1.98
RFX3P48380 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.71□□□□□ -1.98
RFX3P48380 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
RFX3P48380 AL353691.1-201ENST00000451332 387 ntBASIC2.71□□□□□ -1.98
RFX3P48380 AC079203.1-201ENST00000487972 404 ntBASIC2.71□□□□□ -1.98
RFX3P48380 SUMO2P5-201ENST00000506790 245 ntBASIC2.71□□□□□ -1.98
RFX3P48380 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.71□□□□□ -1.98
RFX3P48380 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.71□□□□□ -1.98
RFX3P48380 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.71□□□□□ -1.98
RFX3P48380 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.71□□□□□ -1.98
RFX3P48380 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.71□□□□□ -1.98
RFX3P48380 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.71□□□□□ -1.98
RFX3P48380 AP000867.2-201ENST00000532468 320 ntBASIC2.71□□□□□ -1.98
RFX3P48380 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.71□□□□□ -1.98
RFX3P48380 AC125611.1-201ENST00000549563 229 ntBASIC2.71□□□□□ -1.98
RFX3P48380 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.71□□□□□ -1.98
RFX3P48380 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.71□□□□□ -1.98
RFX3P48380 AC083760.1-201ENST00000589621 670 ntBASIC2.71□□□□□ -1.98
RFX3P48380 AC078899.3-201ENST00000599065 212 ntBASIC2.71□□□□□ -1.98
RFX3P48380 AC135507.2-201ENST00000612443 309 ntBASIC2.71□□□□□ -1.98
RFX3P48380 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
RFX3P48380 AC004009.2-201ENST00000623016 728 ntBASIC2.71□□□□□ -1.98
RFX3P48380 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
RFX3P48380 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
RFX3P48380 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
RFX3P48380 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
RFX3P48380 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
RFX3P48380 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RFX3P48380 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.7□□□□□ -1.98
RFX3P48380 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RFX3P48380 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
RFX3P48380 SNORA9.2-201ENST00000365361 133 ntBASIC2.7□□□□□ -1.98
RFX3P48380 RNU6-224P-201ENST00000384055 107 ntBASIC2.7□□□□□ -1.98
RFX3P48380 SNORA48.5-201ENST00000391143 135 ntBASIC2.7□□□□□ -1.98
RFX3P48380 SNRPEP2-201ENST00000397592 279 ntBASIC2.7□□□□□ -1.98
RFX3P48380 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.7□□□□□ -1.98
RFX3P48380 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.7□□□□□ -1.98
RFX3P48380 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.7□□□□□ -1.98
RFX3P48380 AL645937.1-202ENST00000421799 937 ntBASIC2.7□□□□□ -1.98
RFX3P48380 BEND7P1-201ENST00000422058 457 ntBASIC2.7□□□□□ -1.98
RFX3P48380 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.7□□□□□ -1.98
RFX3P48380 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.7□□□□□ -1.98
RFX3P48380 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.7□□□□□ -1.98
RFX3P48380 RPS20P5-201ENST00000434808 360 ntBASIC2.7□□□□□ -1.98
RFX3P48380 RPS29P6-201ENST00000438196 145 ntBASIC2.7□□□□□ -1.98
RFX3P48380 RPL23AP11-201ENST00000475260 469 ntBASIC2.7□□□□□ -1.98
RFX3P48380 RN7SL499P-201ENST00000481141 276 ntBASIC2.7□□□□□ -1.98
RFX3P48380 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RFX3P48380 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.7□□□□□ -1.98
RFX3P48380 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.7□□□□□ -1.98
RFX3P48380 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.7□□□□□ -1.98
RFX3P48380 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.7□□□□□ -1.98
RFX3P48380 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.7□□□□□ -1.98
RFX3P48380 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.7□□□□□ -1.98
RFX3P48380 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.7□□□□□ -1.98
RFX3P48380 AC011260.1-201ENST00000578420 472 ntBASIC2.7□□□□□ -1.98
RFX3P48380 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.7□□□□□ -1.98
RFX3P48380 AC112220.2-201ENST00000605513 533 ntBASIC2.7□□□□□ -1.98
RFX3P48380 AC024060.1-201ENST00000607052 494 ntBASIC2.7□□□□□ -1.98
RFX3P48380 AP000254.1-201ENST00000609934 520 ntBASIC2.7□□□□□ -1.98
RFX3P48380 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.7□□□□□ -1.98
RFX3P48380 MIR6733-201ENST00000635723 61 ntBASIC2.7□□□□□ -1.98
RFX3P48380 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RFX3P48380 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.69□□□□□ -1.98
RFX3P48380 AP005901.5-201ENST00000545779 1796 ntBASIC2.69□□□□□ -1.98
RFX3P48380 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RFX3P48380 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.69□□□□□ -1.98
RFX3P48380 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.69□□□□□ -1.98
RFX3P48380 RPL9P7-201ENST00000330965 580 ntBASIC2.69□□□□□ -1.98
RFX3P48380 Y_RNA.111-201ENST00000363248 100 ntBASIC2.69□□□□□ -1.98
RFX3P48380 RNU6-216P-201ENST00000363282 104 ntBASIC2.69□□□□□ -1.98
RFX3P48380 RNU4-51P-201ENST00000364206 140 ntBASIC2.69□□□□□ -1.98
RFX3P48380 MIR128-1-201ENST00000384921 82 ntBASIC2.69□□□□□ -1.98
RFX3P48380 AL590004.2-201ENST00000404787 371 ntBASIC2.69□□□□□ -1.98
RFX3P48380 AL450338.1-201ENST00000407987 512 ntBASIC2.69□□□□□ -1.98
RFX3P48380 Z75741.2-201ENST00000417272 1167 ntBASIC2.69□□□□□ -1.98
RFX3P48380 AC007435.1-201ENST00000421086 415 ntBASIC2.69□□□□□ -1.98
RFX3P48380 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.69□□□□□ -1.98
RFX3P48380 HMGN2P30-201ENST00000423237 256 ntBASIC2.69□□□□□ -1.98
RFX3P48380 AL590233.1-201ENST00000430017 456 ntBASIC2.69□□□□□ -1.98
RFX3P48380 MTND2P5-201ENST00000432656 1006 ntBASIC2.69□□□□□ -1.98
RFX3P48380 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
RFX3P48380 RPL21P2-201ENST00000440049 481 ntBASIC2.69□□□□□ -1.98
RFX3P48380 AC104164.3-201ENST00000467363 1258 ntBASIC2.69□□□□□ -1.98
RFX3P48380 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.69□□□□□ -1.98
RFX3P48380 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
RFX3P48380 AC023424.2-201ENST00000493479 777 ntBASIC2.69□□□□□ -1.98
RFX3P48380 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.69□□□□□ -1.98
RFX3P48380 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.69□□□□□ -1.98
RFX3P48380 AC113420.1-201ENST00000507903 571 ntBASIC2.69□□□□□ -1.98
RFX3P48380 MTCYBP16-201ENST00000509187 1129 ntBASIC2.69□□□□□ -1.98
RFX3P48380 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.69□□□□□ -1.98
RFX3P48380 RAC1P5-201ENST00000512182 576 ntBASIC2.69□□□□□ -1.98
RFX3P48380 SCARNA13-201ENST00000516672 275 ntBASIC2.69□□□□□ -1.98
RFX3P48380 AC087808.1-201ENST00000520501 361 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms