Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 OR5BM1P-201ENST00000512021 366 ntBASIC3.45□□□□□ -1.86
HNF4AP41235 SAP18P1-201ENST00000512058 390 ntBASIC3.45□□□□□ -1.86
HNF4AP41235 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
HNF4AP41235 SNORA70.18-201ENST00000516696 98 ntBASIC3.45□□□□□ -1.86
HNF4AP41235 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.45□□□□□ -1.86
HNF4AP41235 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
HNF4AP41235 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.45□□□□□ -1.86
HNF4AP41235 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HNF4AP41235 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.45□□□□□ -1.86
HNF4AP41235 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.45□□□□□ -1.86
HNF4AP41235 AC005951.1-201ENST00000576706 485 ntBASIC3.45□□□□□ -1.86
HNF4AP41235 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.45□□□□□ -1.86
HNF4AP41235 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.45□□□□□ -1.86
HNF4AP41235 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
HNF4AP41235 AC091931.1-201ENST00000623488 728 ntBASIC3.45□□□□□ -1.86
HNF4AP41235 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.45□□□□□ -1.86
HNF4AP41235 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.45□□□□□ -1.86
HNF4AP41235 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HNF4AP41235 AC068647.1-201ENST00000489539 2265 ntBASIC3.45□□□□□ -1.86
HNF4AP41235 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.45□□□□□ -1.86
HNF4AP41235 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HNF4AP41235 AC233263.6-201ENST00000631132 1963 ntBASIC3.44□□□□□ -1.86
HNF4AP41235 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
HNF4AP41235 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
HNF4AP41235 SNORD9-201ENST00000362566 104 ntBASIC3.44□□□□□ -1.86
HNF4AP41235 AL021407.1-201ENST00000404531 386 ntBASIC3.44□□□□□ -1.86
HNF4AP41235 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HNF4AP41235 PIGPP2-201ENST00000411569 458 ntBASIC3.44□□□□□ -1.86
HNF4AP41235 ATP5A1P2-201ENST00000412323 255 ntBASIC3.44□□□□□ -1.86
HNF4AP41235 TPMTP2-201ENST00000414372 726 ntBASIC3.44□□□□□ -1.86
HNF4AP41235 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.44□□□□□ -1.86
HNF4AP41235 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.44□□□□□ -1.86
HNF4AP41235 AL022400.1-201ENST00000423946 935 ntBASIC3.44□□□□□ -1.86
HNF4AP41235 RPL7P46-201ENST00000425129 740 ntBASIC3.44□□□□□ -1.86
HNF4AP41235 AC018644.1-201ENST00000429934 551 ntBASIC3.44□□□□□ -1.86
HNF4AP41235 MTCYBP45-201ENST00000435243 565 ntBASIC3.44□□□□□ -1.86
HNF4AP41235 RPS25P9-201ENST00000435591 252 ntBASIC3.44□□□□□ -1.86
HNF4AP41235 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HNF4AP41235 AC097262.1-201ENST00000452559 548 ntBASIC3.44□□□□□ -1.86
HNF4AP41235 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.44□□□□□ -1.86
HNF4AP41235 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.44□□□□□ -1.86
HNF4AP41235 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.44□□□□□ -1.86
HNF4AP41235 RN7SL594P-201ENST00000470590 287 ntBASIC3.44□□□□□ -1.86
HNF4AP41235 AC084357.1-201ENST00000473404 255 ntBASIC3.44□□□□□ -1.86
HNF4AP41235 AC112198.1-201ENST00000505369 1220 ntBASIC3.44□□□□□ -1.86
HNF4AP41235 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.44□□□□□ -1.86
HNF4AP41235 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.44□□□□□ -1.86
HNF4AP41235 AC006499.2-201ENST00000513470 337 ntBASIC3.44□□□□□ -1.86
HNF4AP41235 AC017037.2-201ENST00000513850 890 ntBASIC3.44□□□□□ -1.86
HNF4AP41235 RNU1-95P-201ENST00000516357 160 ntBASIC3.44□□□□□ -1.86
HNF4AP41235 RNU1-128P-201ENST00000516704 160 ntBASIC3.44□□□□□ -1.86
HNF4AP41235 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.44□□□□□ -1.86
HNF4AP41235 AP006245.1-201ENST00000522549 120 ntBASIC3.44□□□□□ -1.86
HNF4AP41235 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.44□□□□□ -1.86
HNF4AP41235 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.44□□□□□ -1.86
HNF4AP41235 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.44□□□□□ -1.86
HNF4AP41235 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.44□□□□□ -1.86
HNF4AP41235 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HNF4AP41235 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.44□□□□□ -1.86
HNF4AP41235 MIR3915-201ENST00000578518 97 ntBASIC3.44□□□□□ -1.86
HNF4AP41235 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.44□□□□□ -1.86
HNF4AP41235 AC010591.1-201ENST00000603941 649 ntBASIC3.44□□□□□ -1.86
HNF4AP41235 AC018714.1-201ENST00000605028 208 ntBASIC3.44□□□□□ -1.86
HNF4AP41235 AC105129.3-201ENST00000605455 485 ntBASIC3.44□□□□□ -1.86
HNF4AP41235 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.44□□□□□ -1.86
HNF4AP41235 AC139792.2-201ENST00000624218 587 ntBASIC3.44□□□□□ -1.86
HNF4AP41235 AC091965.5-201ENST00000624785 342 ntBASIC3.44□□□□□ -1.86
HNF4AP41235 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.44□□□□□ -1.86
HNF4AP41235 AL034408.1-202ENST00000636088 415 ntBASIC3.44□□□□□ -1.86
HNF4AP41235 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HNF4AP41235 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
HNF4AP41235 AC087359.1-201ENST00000508335 1740 ntBASIC3.44□□□□□ -1.86
HNF4AP41235 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
HNF4AP41235 ELL2P3-201ENST00000457883 1602 ntBASIC3.44□□□□□ -1.86
HNF4AP41235 MTCO1P9-201ENST00000505577 1534 ntBASIC3.44□□□□□ -1.86
HNF4AP41235 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HNF4AP41235 MFSD8-233ENST00000641482 4860 ntBASIC3.43□□□□□ -1.86
HNF4AP41235 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HNF4AP41235 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.43□□□□□ -1.86
HNF4AP41235 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HNF4AP41235 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
HNF4AP41235 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HNF4AP41235 SNORA5A-201ENST00000384111 134 ntBASIC3.43□□□□□ -1.86
HNF4AP41235 Y_RNA.560-201ENST00000384689 102 ntBASIC3.43□□□□□ -1.86
HNF4AP41235 RNU6-1197P-201ENST00000391183 107 ntBASIC3.43□□□□□ -1.86
HNF4AP41235 AL136116.1-201ENST00000403591 381 ntBASIC3.43□□□□□ -1.86
HNF4AP41235 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.43□□□□□ -1.86
HNF4AP41235 AC068533.1-201ENST00000418542 415 ntBASIC3.43□□□□□ -1.86
HNF4AP41235 DBIP2-201ENST00000419076 262 ntBASIC3.43□□□□□ -1.86
HNF4AP41235 TIMM9P2-201ENST00000419324 266 ntBASIC3.43□□□□□ -1.86
HNF4AP41235 SEPT2P1-201ENST00000419651 180 ntBASIC3.43□□□□□ -1.86
HNF4AP41235 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.43□□□□□ -1.86
HNF4AP41235 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.43□□□□□ -1.86
HNF4AP41235 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.43□□□□□ -1.86
HNF4AP41235 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.43□□□□□ -1.86
HNF4AP41235 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.43□□□□□ -1.86
HNF4AP41235 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.43□□□□□ -1.86
HNF4AP41235 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HNF4AP41235 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.43□□□□□ -1.86
HNF4AP41235 SNORD105B-201ENST00000458770 79 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms