Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.78□□□□□ -1.64
CNGA1P29973 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.78□□□□□ -1.64
CNGA1P29973 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.78□□□□□ -1.64
CNGA1P29973 SLC25A36P1-201ENST00000590111 465 ntBASIC4.78□□□□□ -1.64
CNGA1P29973 AC008277.2-201ENST00000605196 797 ntBASIC4.78□□□□□ -1.64
CNGA1P29973 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.78□□□□□ -1.64
CNGA1P29973 AC103710.2-201ENST00000609912 942 ntBASIC4.78□□□□□ -1.64
CNGA1P29973 AC092794.1-201ENST00000612734 582 ntBASIC4.78□□□□□ -1.64
CNGA1P29973 RMST_9.1-201ENST00000619945 193 ntBASIC4.78□□□□□ -1.64
CNGA1P29973 MIR6500-201ENST00000622700 86 ntBASIC4.78□□□□□ -1.64
CNGA1P29973 AC124864.2-201ENST00000624736 186 ntBASIC4.78□□□□□ -1.64
CNGA1P29973 AC138649.5-201ENST00000637456 137 ntBASIC4.78□□□□□ -1.64
CNGA1P29973 OR5H6-203ENST00000642105 978 ntBASIC4.78□□□□□ -1.64
CNGA1P29973 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CNGA1P29973 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.78□□□□□ -1.64
CNGA1P29973 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CNGA1P29973 TAB3P1-202ENST00000452645 1634 ntBASIC4.78□□□□□ -1.64
CNGA1P29973 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
CNGA1P29973 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.78□□□□□ -1.64
CNGA1P29973 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CNGA1P29973 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.78□□□□□ -1.64
CNGA1P29973 DDX10P1-201ENST00000448545 1933 ntBASIC4.78□□□□□ -1.64
CNGA1P29973 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CNGA1P29973 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CNGA1P29973 Z82217.1-201ENST00000625157 8149 ntBASIC4.77□□□□□ -1.65
CNGA1P29973 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.77□□□□□ -1.65
CNGA1P29973 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CNGA1P29973 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CNGA1P29973 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.77□□□□□ -1.65
CNGA1P29973 RNU6-282P-201ENST00000365357 103 ntBASIC4.77□□□□□ -1.65
CNGA1P29973 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CNGA1P29973 AC004552.1-201ENST00000419089 348 ntBASIC4.77□□□□□ -1.65
CNGA1P29973 ELOCP4-201ENST00000420090 333 ntBASIC4.77□□□□□ -1.65
CNGA1P29973 PPP1R11P2-201ENST00000423543 382 ntBASIC4.77□□□□□ -1.65
CNGA1P29973 MTCO1P39-201ENST00000426148 480 ntBASIC4.77□□□□□ -1.65
CNGA1P29973 MTCO2P11-201ENST00000431069 680 ntBASIC4.77□□□□□ -1.65
CNGA1P29973 AL451074.3-201ENST00000437709 472 ntBASIC4.77□□□□□ -1.65
CNGA1P29973 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.77□□□□□ -1.65
CNGA1P29973 AL133547.1-201ENST00000448546 220 ntBASIC4.77□□□□□ -1.65
CNGA1P29973 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.77□□□□□ -1.65
CNGA1P29973 AC132479.1-201ENST00000449160 144 ntBASIC4.77□□□□□ -1.65
CNGA1P29973 AL162389.1-201ENST00000449233 177 ntBASIC4.77□□□□□ -1.65
CNGA1P29973 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.77□□□□□ -1.65
CNGA1P29973 FABP3P2-201ENST00000453169 399 ntBASIC4.77□□□□□ -1.65
CNGA1P29973 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.77□□□□□ -1.65
CNGA1P29973 RPS26P3-201ENST00000470205 348 ntBASIC4.77□□□□□ -1.65
CNGA1P29973 RPL7P49-201ENST00000471402 708 ntBASIC4.77□□□□□ -1.65
CNGA1P29973 AC126182.1-201ENST00000478134 357 ntBASIC4.77□□□□□ -1.65
CNGA1P29973 AC090543.2-201ENST00000483963 348 ntBASIC4.77□□□□□ -1.65
CNGA1P29973 AC004057.1-201ENST00000485827 348 ntBASIC4.77□□□□□ -1.65
CNGA1P29973 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.77□□□□□ -1.65
CNGA1P29973 RNU6-64P-201ENST00000517119 105 ntBASIC4.77□□□□□ -1.65
CNGA1P29973 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.77□□□□□ -1.65
CNGA1P29973 OR5G4P-201ENST00000525251 760 ntBASIC4.77□□□□□ -1.65
CNGA1P29973 AC109635.4-202ENST00000531666 412 ntBASIC4.77□□□□□ -1.65
CNGA1P29973 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.77□□□□□ -1.65
CNGA1P29973 AL352979.3-201ENST00000553515 247 ntBASIC4.77□□□□□ -1.65
CNGA1P29973 AP000860.1-201ENST00000605250 559 ntBASIC4.77□□□□□ -1.65
CNGA1P29973 TUG1_2.1-201ENST00000614234 87 ntBASIC4.77□□□□□ -1.65
CNGA1P29973 AL158209.2-201ENST00000619266 216 ntBASIC4.77□□□□□ -1.65
CNGA1P29973 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CNGA1P29973 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.77□□□□□ -1.65
CNGA1P29973 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CNGA1P29973 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CNGA1P29973 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CNGA1P29973 AC016588.2-201ENST00000632484 3021 ntBASIC4.77□□□□□ -1.65
CNGA1P29973 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CNGA1P29973 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CNGA1P29973 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CNGA1P29973 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.77□□□□□ -1.65
CNGA1P29973 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CNGA1P29973 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.76□□□□□ -1.65
CNGA1P29973 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.76□□□□□ -1.65
CNGA1P29973 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CNGA1P29973 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
CNGA1P29973 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
CNGA1P29973 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CNGA1P29973 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CNGA1P29973 RNU6-181P-201ENST00000363225 107 ntBASIC4.76□□□□□ -1.65
CNGA1P29973 RNU6-169P-201ENST00000365336 107 ntBASIC4.76□□□□□ -1.65
CNGA1P29973 RNU6-1181P-201ENST00000384191 106 ntBASIC4.76□□□□□ -1.65
CNGA1P29973 MIR93-201ENST00000385024 80 ntBASIC4.76□□□□□ -1.65
CNGA1P29973 RPL7AP73-201ENST00000413490 353 ntBASIC4.76□□□□□ -1.65
CNGA1P29973 DUTP6-201ENST00000425573 462 ntBASIC4.76□□□□□ -1.65
CNGA1P29973 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.76□□□□□ -1.65
CNGA1P29973 AC016696.1-201ENST00000446949 318 ntBASIC4.76□□□□□ -1.65
CNGA1P29973 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.76□□□□□ -1.65
CNGA1P29973 RPS26P28-201ENST00000470806 348 ntBASIC4.76□□□□□ -1.65
CNGA1P29973 RPS29P19-201ENST00000479709 171 ntBASIC4.76□□□□□ -1.65
CNGA1P29973 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.76□□□□□ -1.65
CNGA1P29973 RPS15AP36-201ENST00000492022 382 ntBASIC4.76□□□□□ -1.65
CNGA1P29973 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.76□□□□□ -1.65
CNGA1P29973 RNU6-445P-201ENST00000516949 107 ntBASIC4.76□□□□□ -1.65
CNGA1P29973 TRMT10BP1-201ENST00000519377 943 ntBASIC4.76□□□□□ -1.65
CNGA1P29973 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CNGA1P29973 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.76□□□□□ -1.65
CNGA1P29973 AC124947.2-202ENST00000552735 133 ntBASIC4.76□□□□□ -1.65
CNGA1P29973 ZNF519P2-201ENST00000557032 169 ntBASIC4.76□□□□□ -1.65
CNGA1P29973 AC136619.2-201ENST00000563361 631 ntBASIC4.76□□□□□ -1.65
CNGA1P29973 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms