Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.71□□□□□ -1.82
PCNAP12004 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.7□□□□□ -1.82
PCNAP12004 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PCNAP12004 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCNAP12004 AC011460.1-201ENST00000636268 1834 ntBASIC3.7□□□□□ -1.82
PCNAP12004 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PCNAP12004 AL079305.1-201ENST00000623159 3008 ntBASIC3.7□□□□□ -1.82
PCNAP12004 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCNAP12004 RNU6-1155P-201ENST00000363554 107 ntBASIC3.7□□□□□ -1.82
PCNAP12004 SNORA70.2-201ENST00000364506 135 ntBASIC3.7□□□□□ -1.82
PCNAP12004 RNU6-335P-201ENST00000364563 113 ntBASIC3.7□□□□□ -1.82
PCNAP12004 RNA5SP235-201ENST00000365411 114 ntBASIC3.7□□□□□ -1.82
PCNAP12004 RNA5SP283-201ENST00000365604 119 ntBASIC3.7□□□□□ -1.82
PCNAP12004 SNORD115.1-201ENST00000391109 76 ntBASIC3.7□□□□□ -1.82
PCNAP12004 HLFP1-201ENST00000402375 499 ntBASIC3.7□□□□□ -1.82
PCNAP12004 FCF1P10-201ENST00000407590 479 ntBASIC3.7□□□□□ -1.82
PCNAP12004 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.7□□□□□ -1.82
PCNAP12004 SPA17P1-201ENST00000416656 452 ntBASIC3.7□□□□□ -1.82
PCNAP12004 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.7□□□□□ -1.82
PCNAP12004 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.7□□□□□ -1.82
PCNAP12004 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.7□□□□□ -1.82
PCNAP12004 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.7□□□□□ -1.82
PCNAP12004 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.7□□□□□ -1.82
PCNAP12004 UBE2V1P13-201ENST00000436983 439 ntBASIC3.7□□□□□ -1.82
PCNAP12004 AL049734.2-201ENST00000441066 616 ntBASIC3.7□□□□□ -1.82
PCNAP12004 RAC1P7-201ENST00000445367 377 ntBASIC3.7□□□□□ -1.82
PCNAP12004 TPT1P14-201ENST00000448018 505 ntBASIC3.7□□□□□ -1.82
PCNAP12004 HMGB3P8-201ENST00000449709 577 ntBASIC3.7□□□□□ -1.82
PCNAP12004 AC098824.1-201ENST00000453565 980 ntBASIC3.7□□□□□ -1.82
PCNAP12004 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.7□□□□□ -1.82
PCNAP12004 AC099563.1-201ENST00000456086 418 ntBASIC3.7□□□□□ -1.82
PCNAP12004 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.7□□□□□ -1.82
PCNAP12004 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.7□□□□□ -1.82
PCNAP12004 KLF3P2-201ENST00000465138 268 ntBASIC3.7□□□□□ -1.82
PCNAP12004 RN7SL385P-201ENST00000468873 276 ntBASIC3.7□□□□□ -1.82
PCNAP12004 TRBV12-2-201ENST00000489763 344 ntBASIC3.7□□□□□ -1.82
PCNAP12004 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.7□□□□□ -1.82
PCNAP12004 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.7□□□□□ -1.82
PCNAP12004 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.7□□□□□ -1.82
PCNAP12004 NPM1P41-201ENST00000512920 831 ntBASIC3.7□□□□□ -1.82
PCNAP12004 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.7□□□□□ -1.82
PCNAP12004 AL133271.1-201ENST00000538229 291 ntBASIC3.7□□□□□ -1.82
PCNAP12004 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.7□□□□□ -1.82
PCNAP12004 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.7□□□□□ -1.82
PCNAP12004 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.7□□□□□ -1.82
PCNAP12004 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.7□□□□□ -1.82
PCNAP12004 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.7□□□□□ -1.82
PCNAP12004 AC090877.1-201ENST00000561418 344 ntBASIC3.7□□□□□ -1.82
PCNAP12004 AC137800.2-201ENST00000574375 120 ntBASIC3.7□□□□□ -1.82
PCNAP12004 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.7□□□□□ -1.82
PCNAP12004 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.7□□□□□ -1.82
PCNAP12004 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.7□□□□□ -1.82
PCNAP12004 Z99129.1-201ENST00000612510 255 ntBASIC3.7□□□□□ -1.82
PCNAP12004 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
PCNAP12004 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.7□□□□□ -1.82
PCNAP12004 AC084035.1-201ENST00000634543 607 ntBASIC3.7□□□□□ -1.82
PCNAP12004 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCNAP12004 AC009902.3-201ENST00000606235 2172 ntBASIC3.7□□□□□ -1.82
PCNAP12004 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
PCNAP12004 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PCNAP12004 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCNAP12004 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCNAP12004 AL645937.1-201ENST00000641739 1652 ntBASIC3.69□□□□□ -1.82
PCNAP12004 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCNAP12004 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCNAP12004 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.69□□□□□ -1.82
PCNAP12004 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
PCNAP12004 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCNAP12004 RNY4P24-201ENST00000362735 96 ntBASIC3.69□□□□□ -1.82
PCNAP12004 RNY4P34-201ENST00000364779 95 ntBASIC3.69□□□□□ -1.82
PCNAP12004 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
PCNAP12004 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
PCNAP12004 HSPE1P8-201ENST00000406997 288 ntBASIC3.69□□□□□ -1.82
PCNAP12004 RNU2-16P-201ENST00000410712 136 ntBASIC3.69□□□□□ -1.82
PCNAP12004 OR1AA1P-201ENST00000419597 916 ntBASIC3.69□□□□□ -1.82
PCNAP12004 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.69□□□□□ -1.82
PCNAP12004 AL589872.1-201ENST00000426602 288 ntBASIC3.69□□□□□ -1.82
PCNAP12004 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.69□□□□□ -1.82
PCNAP12004 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.69□□□□□ -1.82
PCNAP12004 MTND6P13-201ENST00000443510 523 ntBASIC3.69□□□□□ -1.82
PCNAP12004 HSFY6P-201ENST00000445573 403 ntBASIC3.69□□□□□ -1.82
PCNAP12004 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.69□□□□□ -1.82
PCNAP12004 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.69□□□□□ -1.82
PCNAP12004 RPL7P15-201ENST00000461190 712 ntBASIC3.69□□□□□ -1.82
PCNAP12004 LARP1BP2-201ENST00000486594 519 ntBASIC3.69□□□□□ -1.82
PCNAP12004 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.69□□□□□ -1.82
PCNAP12004 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
PCNAP12004 RNU6-201P-201ENST00000517100 61 ntBASIC3.69□□□□□ -1.82
PCNAP12004 SNORA31.20-201ENST00000517111 133 ntBASIC3.69□□□□□ -1.82
PCNAP12004 AP003467.2-201ENST00000520175 319 ntBASIC3.69□□□□□ -1.82
PCNAP12004 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.69□□□□□ -1.82
PCNAP12004 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.69□□□□□ -1.82
PCNAP12004 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.69□□□□□ -1.82
PCNAP12004 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.69□□□□□ -1.82
PCNAP12004 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.69□□□□□ -1.82
PCNAP12004 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.69□□□□□ -1.82
PCNAP12004 AL356432.3-201ENST00000568952 465 ntBASIC3.69□□□□□ -1.82
PCNAP12004 AC012557.2-201ENST00000605919 418 ntBASIC3.69□□□□□ -1.82
PCNAP12004 AL158211.4-201ENST00000606988 584 ntBASIC3.69□□□□□ -1.82
PCNAP12004 AL589743.7-201ENST00000612637 233 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms