Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RPL21P39-201ENST00000463605 483 ntBASIC2.65□□□□□ -1.99
TOP2AP11388 RN7SL274P-201ENST00000492268 272 ntBASIC2.65□□□□□ -1.99
TOP2AP11388 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.65□□□□□ -1.99
TOP2AP11388 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.65□□□□□ -1.99
TOP2AP11388 AC113368.1-201ENST00000603736 382 ntBASIC2.65□□□□□ -1.99
TOP2AP11388 AC090617.7-201ENST00000623952 126 ntBASIC2.65□□□□□ -1.99
TOP2AP11388 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
TOP2AP11388 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.99
TOP2AP11388 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.64□□□□□ -1.99
TOP2AP11388 Y_RNA.224-201ENST00000364308 111 ntBASIC2.64□□□□□ -1.99
TOP2AP11388 RNA5SP167-201ENST00000365461 116 ntBASIC2.64□□□□□ -1.99
TOP2AP11388 HSPE1P26-201ENST00000405341 275 ntBASIC2.64□□□□□ -1.99
TOP2AP11388 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.64□□□□□ -1.99
TOP2AP11388 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.64□□□□□ -1.99
TOP2AP11388 AC008687.2-201ENST00000597865 520 ntBASIC2.64□□□□□ -1.99
TOP2AP11388 AC012493.3-201ENST00000604494 112 ntBASIC2.64□□□□□ -1.99
TOP2AP11388 AL159169.2-201ENST00000610061 1269 ntBASIC2.64□□□□□ -1.99
TOP2AP11388 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.64□□□□□ -1.99
TOP2AP11388 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.63□□□□□ -1.99
TOP2AP11388 RNA5SP295-201ENST00000362655 121 ntBASIC2.63□□□□□ -1.99
TOP2AP11388 Y_RNA.122-201ENST00000363331 96 ntBASIC2.63□□□□□ -1.99
TOP2AP11388 RPL21P75-201ENST00000396599 483 ntBASIC2.63□□□□□ -1.99
TOP2AP11388 RPL23AP29-201ENST00000397284 453 ntBASIC2.63□□□□□ -1.99
TOP2AP11388 RPL21P28-201ENST00000401418 483 ntBASIC2.63□□□□□ -1.99
TOP2AP11388 AL592114.1-201ENST00000403842 483 ntBASIC2.63□□□□□ -1.99
TOP2AP11388 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.63□□□□□ -1.99
TOP2AP11388 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.63□□□□□ -1.99
TOP2AP11388 AC011979.1-201ENST00000472300 483 ntBASIC2.63□□□□□ -1.99
TOP2AP11388 RPL21P93-201ENST00000480465 489 ntBASIC2.63□□□□□ -1.99
TOP2AP11388 AC233702.1-201ENST00000482905 502 ntBASIC2.63□□□□□ -1.99
TOP2AP11388 AC093591.1-201ENST00000491435 481 ntBASIC2.63□□□□□ -1.99
TOP2AP11388 RPL21P16-201ENST00000495531 483 ntBASIC2.63□□□□□ -1.99
TOP2AP11388 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.63□□□□□ -1.99
TOP2AP11388 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.63□□□□□ -1.99
TOP2AP11388 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.63□□□□□ -1.99
TOP2AP11388 SEPT7P9-203ENST00000604116 343 ntBASIC2.63□□□□□ -1.99
TOP2AP11388 MIR6504-201ENST00000613520 61 ntBASIC2.63□□□□□ -1.99
TOP2AP11388 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC2.63□□□□□ -1.99
TOP2AP11388 RNU6-56P-201ENST00000516986 93 ntBASIC2.63□□□□□ -1.99
TOP2AP11388 HSPE1P20-201ENST00000538133 289 ntBASIC2.63□□□□□ -1.99
TOP2AP11388 AL354695.1-201ENST00000427935 228 ntBASIC2.62□□□□□ -1.99
TOP2AP11388 FO393414.1-201ENST00000428697 1184 ntBASIC2.62□□□□□ -1.99
TOP2AP11388 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.62□□□□□ -1.99
TOP2AP11388 DNAJC19P4-201ENST00000440115 345 ntBASIC2.62□□□□□ -1.99
TOP2AP11388 AL163153.1-201ENST00000554223 283 ntBASIC2.62□□□□□ -1.99
TOP2AP11388 MIR3660-201ENST00000584845 100 ntBASIC2.62□□□□□ -1.99
TOP2AP11388 AC011468.4-201ENST00000603942 409 ntBASIC2.62□□□□□ -1.99
TOP2AP11388 MIR6895-201ENST00000613497 78 ntBASIC2.62□□□□□ -1.99
TOP2AP11388 MIR4278-201ENST00000636094 69 ntBASIC2.62□□□□□ -1.99
TOP2AP11388 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
TOP2AP11388 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
TOP2AP11388 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
TOP2AP11388 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.61□□□□□ -1.99
TOP2AP11388 AC239860.2-201ENST00000525886 270 ntBASIC2.61□□□□□ -1.99
TOP2AP11388 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.61□□□□□ -1.99
TOP2AP11388 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.61□□□□□ -1.99
TOP2AP11388 CD24P2-201ENST00000565486 219 ntBASIC2.61□□□□□ -1.99
TOP2AP11388 AC068944.2-201ENST00000610373 403 ntBASIC2.61□□□□□ -1.99
TOP2AP11388 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.61□□□□□ -1.99
TOP2AP11388 AC027514.1-201ENST00000588561 1603 ntBASIC2.6□□□□□ -1.99
TOP2AP11388 ZNF209P-201ENST00000593450 2304 ntBASIC2.6□□□□□ -1.99
TOP2AP11388 NUP58P1-201ENST00000502546 1738 ntBASIC2.6□□□□□ -1.99
TOP2AP11388 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
TOP2AP11388 RNU6-356P-201ENST00000384140 107 ntBASIC2.6□□□□□ -1.99
TOP2AP11388 MIR7-2-201ENST00000384970 110 ntBASIC2.6□□□□□ -1.99
TOP2AP11388 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.6□□□□□ -1.99
TOP2AP11388 AC005912.1-201ENST00000495392 255 ntBASIC2.6□□□□□ -1.99
TOP2AP11388 RNA5SP102-201ENST00000516865 106 ntBASIC2.6□□□□□ -1.99
TOP2AP11388 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
TOP2AP11388 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.6□□□□□ -1.99
TOP2AP11388 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
TOP2AP11388 SSXP9-201ENST00000417503 292 ntBASIC2.59□□□□□ -1.99
TOP2AP11388 HMGN2P19-201ENST00000425149 265 ntBASIC2.59□□□□□ -1.99
TOP2AP11388 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.59□□□□□ -1.99
TOP2AP11388 AIG1P1-201ENST00000503376 148 ntBASIC2.59□□□□□ -1.99
TOP2AP11388 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.59□□□□□ -1.99
TOP2AP11388 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.59□□□□□ -1.99
TOP2AP11388 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
TOP2AP11388 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
TOP2AP11388 AL158801.5-201ENST00000623123 465 ntBASIC2.59□□□□□ -1.99
TOP2AP11388 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
TOP2AP11388 AC103710.2-202ENST00000641454 2853 ntBASIC2.59□□□□□ -1.99
TOP2AP11388 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.59□□□□□ -2
TOP2AP11388 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.58□□□□□ -2
TOP2AP11388 AP000873.1-201ENST00000463987 400 ntBASIC2.58□□□□□ -2
TOP2AP11388 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.58□□□□□ -2
TOP2AP11388 AC068781.1-201ENST00000488231 618 ntBASIC2.58□□□□□ -2
TOP2AP11388 MTCO1P30-201ENST00000515244 580 ntBASIC2.58□□□□□ -2
TOP2AP11388 AL157834.3-201ENST00000615543 103 ntBASIC2.58□□□□□ -2
TOP2AP11388 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.58□□□□□ -2
TOP2AP11388 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.58□□□□□ -2
TOP2AP11388 AC073264.1-201ENST00000411508 416 ntBASIC2.58□□□□□ -2
TOP2AP11388 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.58□□□□□ -2
TOP2AP11388 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC2.58□□□□□ -2
TOP2AP11388 RPL7P31-201ENST00000450192 724 ntBASIC2.58□□□□□ -2
TOP2AP11388 AC080013.2-201ENST00000460866 323 ntBASIC2.58□□□□□ -2
TOP2AP11388 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.58□□□□□ -2
TOP2AP11388 RN7SKP40-201ENST00000517211 242 ntBASIC2.58□□□□□ -2
TOP2AP11388 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.58□□□□□ -2
TOP2AP11388 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms