Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 RPS7P7-201ENST00000463499 571 ntBASIC4.68□□□□□ -1.66
HMGB1P09429 AC116337.2-201ENST00000477662 156 ntBASIC4.68□□□□□ -1.66
HMGB1P09429 MTCYBP35-201ENST00000503630 1137 ntBASIC4.68□□□□□ -1.66
HMGB1P09429 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
HMGB1P09429 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.68□□□□□ -1.66
HMGB1P09429 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
HMGB1P09429 AC026726.1-201ENST00000512859 601 ntBASIC4.68□□□□□ -1.66
HMGB1P09429 RNU6-1129P-201ENST00000515964 104 ntBASIC4.68□□□□□ -1.66
HMGB1P09429 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC4.68□□□□□ -1.66
HMGB1P09429 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.68□□□□□ -1.66
HMGB1P09429 AC123904.2-201ENST00000548059 300 ntBASIC4.68□□□□□ -1.66
HMGB1P09429 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.68□□□□□ -1.66
HMGB1P09429 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.68□□□□□ -1.66
HMGB1P09429 AP000403.1-201ENST00000603349 851 ntBASIC4.68□□□□□ -1.66
HMGB1P09429 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.68□□□□□ -1.66
HMGB1P09429 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HMGB1P09429 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.68□□□□□ -1.66
HMGB1P09429 AC006927.3-201ENST00000638789 384 ntBASIC4.68□□□□□ -1.66
HMGB1P09429 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.68□□□□□ -1.66
HMGB1P09429 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMGB1P09429 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMGB1P09429 ZNF826P-207ENST00000622273 1910 ntBASIC4.68□□□□□ -1.66
HMGB1P09429 GABRG2-229ENST00000641017 3628 ntBASIC4.67□□□□□ -1.66
HMGB1P09429 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.67□□□□□ -1.66
HMGB1P09429 AP003122.5-201ENST00000527668 3766 ntBASIC4.67□□□□□ -1.66
HMGB1P09429 AL079305.1-201ENST00000623159 3008 ntBASIC4.67□□□□□ -1.66
HMGB1P09429 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMGB1P09429 RNU1-105P-201ENST00000363470 161 ntBASIC4.67□□□□□ -1.66
HMGB1P09429 SNORA62-201ENST00000365493 153 ntBASIC4.67□□□□□ -1.66
HMGB1P09429 MIR141-201ENST00000384975 95 ntBASIC4.67□□□□□ -1.66
HMGB1P09429 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HMGB1P09429 MTCYBP36-201ENST00000404146 440 ntBASIC4.67□□□□□ -1.66
HMGB1P09429 Z98941.1-201ENST00000407764 100 ntBASIC4.67□□□□□ -1.66
HMGB1P09429 ELOCP17-201ENST00000414751 326 ntBASIC4.67□□□□□ -1.66
HMGB1P09429 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.67□□□□□ -1.66
HMGB1P09429 AL365396.1-201ENST00000430854 671 ntBASIC4.67□□□□□ -1.66
HMGB1P09429 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.67□□□□□ -1.66
HMGB1P09429 FCF1P1-201ENST00000432690 571 ntBASIC4.67□□□□□ -1.66
HMGB1P09429 AC010153.1-201ENST00000432862 727 ntBASIC4.67□□□□□ -1.66
HMGB1P09429 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.67□□□□□ -1.66
HMGB1P09429 AC009220.1-201ENST00000451614 275 ntBASIC4.67□□□□□ -1.66
HMGB1P09429 ZNF114P1-201ENST00000453500 292 ntBASIC4.67□□□□□ -1.66
HMGB1P09429 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.67□□□□□ -1.66
HMGB1P09429 RNU7-125P-201ENST00000458760 62 ntBASIC4.67□□□□□ -1.66
HMGB1P09429 RPL7P5-201ENST00000471472 736 ntBASIC4.67□□□□□ -1.66
HMGB1P09429 RPS3AP6-201ENST00000484430 795 ntBASIC4.67□□□□□ -1.66
HMGB1P09429 AC093663.1-201ENST00000497190 394 ntBASIC4.67□□□□□ -1.66
HMGB1P09429 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.67□□□□□ -1.66
HMGB1P09429 FTH1P21-201ENST00000512179 511 ntBASIC4.67□□□□□ -1.66
HMGB1P09429 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.67□□□□□ -1.66
HMGB1P09429 YPEL5P3-201ENST00000547227 352 ntBASIC4.67□□□□□ -1.66
HMGB1P09429 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.67□□□□□ -1.66
HMGB1P09429 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.67□□□□□ -1.66
HMGB1P09429 AC006504.3-201ENST00000586818 523 ntBASIC4.67□□□□□ -1.66
HMGB1P09429 AC008739.2-201ENST00000597006 317 ntBASIC4.67□□□□□ -1.66
HMGB1P09429 KC877982.1-201ENST00000602313 470 ntBASIC4.67□□□□□ -1.66
HMGB1P09429 AC136601.2-201ENST00000604356 474 ntBASIC4.67□□□□□ -1.66
HMGB1P09429 MTND4LP5-201ENST00000605152 292 ntBASIC4.67□□□□□ -1.66
HMGB1P09429 AC008277.2-201ENST00000605196 797 ntBASIC4.67□□□□□ -1.66
HMGB1P09429 AC004832.5-201ENST00000608677 401 ntBASIC4.67□□□□□ -1.66
HMGB1P09429 MIR6748-201ENST00000610433 71 ntBASIC4.67□□□□□ -1.66
HMGB1P09429 AC068880.5-201ENST00000624331 290 ntBASIC4.67□□□□□ -1.66
HMGB1P09429 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.67□□□□□ -1.66
HMGB1P09429 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.67□□□□□ -1.66
HMGB1P09429 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.67□□□□□ -1.66
HMGB1P09429 AC018555.1-201ENST00000567548 1980 ntBASIC4.67□□□□□ -1.66
HMGB1P09429 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
HMGB1P09429 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
HMGB1P09429 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
HMGB1P09429 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.66□□□□□ -1.66
HMGB1P09429 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HMGB1P09429 MIR767-201ENST00000390228 109 ntBASIC4.66□□□□□ -1.66
HMGB1P09429 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.66□□□□□ -1.66
HMGB1P09429 ATG3P1-201ENST00000419507 911 ntBASIC4.66□□□□□ -1.66
HMGB1P09429 AC005005.2-201ENST00000420779 380 ntBASIC4.66□□□□□ -1.66
HMGB1P09429 AL389915.1-201ENST00000422463 466 ntBASIC4.66□□□□□ -1.66
HMGB1P09429 AL691449.1-201ENST00000426570 421 ntBASIC4.66□□□□□ -1.66
HMGB1P09429 AL365184.2-201ENST00000431139 435 ntBASIC4.66□□□□□ -1.66
HMGB1P09429 SKP1P1-201ENST00000438081 489 ntBASIC4.66□□□□□ -1.66
HMGB1P09429 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.66□□□□□ -1.66
HMGB1P09429 RNU7-23P-201ENST00000459465 62 ntBASIC4.66□□□□□ -1.66
HMGB1P09429 RPL21P11-201ENST00000461458 483 ntBASIC4.66□□□□□ -1.66
HMGB1P09429 AC091179.1-201ENST00000461606 579 ntBASIC4.66□□□□□ -1.66
HMGB1P09429 AP002884.2-201ENST00000471647 395 ntBASIC4.66□□□□□ -1.66
HMGB1P09429 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.66□□□□□ -1.66
HMGB1P09429 AC069499.1-201ENST00000489433 509 ntBASIC4.66□□□□□ -1.66
HMGB1P09429 RPS27P26-201ENST00000494583 239 ntBASIC4.66□□□□□ -1.66
HMGB1P09429 RNU6-927P-201ENST00000516199 100 ntBASIC4.66□□□□□ -1.66
HMGB1P09429 RNU6-1003P-201ENST00000517099 105 ntBASIC4.66□□□□□ -1.66
HMGB1P09429 RNA5SP179-201ENST00000517284 121 ntBASIC4.66□□□□□ -1.66
HMGB1P09429 RANP9-201ENST00000519957 271 ntBASIC4.66□□□□□ -1.66
HMGB1P09429 AC087369.1-201ENST00000520775 996 ntBASIC4.66□□□□□ -1.66
HMGB1P09429 AC100870.1-201ENST00000522035 505 ntBASIC4.66□□□□□ -1.66
HMGB1P09429 AC008015.1-201ENST00000555505 465 ntBASIC4.66□□□□□ -1.66
HMGB1P09429 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.66□□□□□ -1.66
HMGB1P09429 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.66□□□□□ -1.66
HMGB1P09429 MIR4293-201ENST00000584305 78 ntBASIC4.66□□□□□ -1.66
HMGB1P09429 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.66□□□□□ -1.66
HMGB1P09429 AC091167.4-201ENST00000605079 184 ntBASIC4.66□□□□□ -1.66
HMGB1P09429 AL136363.1-201ENST00000605349 337 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms