Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AC080013.6-201ENST00000606185 215 ntBASIC2.99□□□□□ -1.93
CDX4O14627 AC103710.3-201ENST00000608157 948 ntBASIC2.99□□□□□ -1.93
CDX4O14627 AC243773.3-201ENST00000613270 256 ntBASIC2.99□□□□□ -1.93
CDX4O14627 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CDX4O14627 AC007490.1-201ENST00000624321 703 ntBASIC2.99□□□□□ -1.93
CDX4O14627 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.99□□□□□ -1.93
CDX4O14627 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CDX4O14627 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.99□□□□□ -1.93
CDX4O14627 NUP58P1-201ENST00000502546 1738 ntBASIC2.99□□□□□ -1.93
CDX4O14627 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CDX4O14627 MTCO1P23-201ENST00000415223 1526 ntBASIC2.98□□□□□ -1.93
CDX4O14627 AL513185.3-201ENST00000433335 1300 ntBASIC2.98□□□□□ -1.93
CDX4O14627 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.98□□□□□ -1.93
CDX4O14627 AL079343.1-201ENST00000572358 1771 ntBASIC2.98□□□□□ -1.93
CDX4O14627 SNRPEP3-201ENST00000338402 276 ntBASIC2.98□□□□□ -1.93
CDX4O14627 RNU6-335P-201ENST00000364563 113 ntBASIC2.98□□□□□ -1.93
CDX4O14627 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.98□□□□□ -1.93
CDX4O14627 RNU6-821P-201ENST00000390995 107 ntBASIC2.98□□□□□ -1.93
CDX4O14627 AC016769.3-201ENST00000396562 315 ntBASIC2.98□□□□□ -1.93
CDX4O14627 AL356131.1-201ENST00000405826 414 ntBASIC2.98□□□□□ -1.93
CDX4O14627 Z98941.1-201ENST00000407764 100 ntBASIC2.98□□□□□ -1.93
CDX4O14627 USP9YP26-201ENST00000421008 661 ntBASIC2.98□□□□□ -1.93
CDX4O14627 AL513174.1-201ENST00000423182 629 ntBASIC2.98□□□□□ -1.93
CDX4O14627 AL049610.1-201ENST00000423374 372 ntBASIC2.98□□□□□ -1.93
CDX4O14627 RPL21P40-201ENST00000428586 483 ntBASIC2.98□□□□□ -1.93
CDX4O14627 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.98□□□□□ -1.93
CDX4O14627 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.98□□□□□ -1.93
CDX4O14627 FTH1P1-201ENST00000437933 532 ntBASIC2.98□□□□□ -1.93
CDX4O14627 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.98□□□□□ -1.93
CDX4O14627 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.98□□□□□ -1.93
CDX4O14627 snoU13.3-201ENST00000459441 104 ntBASIC2.98□□□□□ -1.93
CDX4O14627 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.98□□□□□ -1.93
CDX4O14627 AC126389.1-201ENST00000477436 290 ntBASIC2.98□□□□□ -1.93
CDX4O14627 RPS4XP22-201ENST00000480755 780 ntBASIC2.98□□□□□ -1.93
CDX4O14627 RPL31P13-201ENST00000484151 370 ntBASIC2.98□□□□□ -1.93
CDX4O14627 FCF1P3-201ENST00000496394 590 ntBASIC2.98□□□□□ -1.93
CDX4O14627 AC083906.5-201ENST00000503722 328 ntBASIC2.98□□□□□ -1.93
CDX4O14627 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.98□□□□□ -1.93
CDX4O14627 YWHAEP4-201ENST00000505390 198 ntBASIC2.98□□□□□ -1.93
CDX4O14627 HMGB3P15-201ENST00000507326 574 ntBASIC2.98□□□□□ -1.93
CDX4O14627 AC021146.8-201ENST00000507455 733 ntBASIC2.98□□□□□ -1.93
CDX4O14627 AC010625.1-201ENST00000511296 403 ntBASIC2.98□□□□□ -1.93
CDX4O14627 RNU6-583P-201ENST00000516012 92 ntBASIC2.98□□□□□ -1.93
CDX4O14627 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.98□□□□□ -1.93
CDX4O14627 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC2.98□□□□□ -1.93
CDX4O14627 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.98□□□□□ -1.93
CDX4O14627 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.98□□□□□ -1.93
CDX4O14627 HSPE1P3-201ENST00000559254 309 ntBASIC2.98□□□□□ -1.93
CDX4O14627 AC087465.1-201ENST00000560574 245 ntBASIC2.98□□□□□ -1.93
CDX4O14627 AL360157.1-201ENST00000565962 87 ntBASIC2.98□□□□□ -1.93
CDX4O14627 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.98□□□□□ -1.93
CDX4O14627 VN1R82P-201ENST00000601481 356 ntBASIC2.98□□□□□ -1.93
CDX4O14627 AC104763.2-201ENST00000604179 382 ntBASIC2.98□□□□□ -1.93
CDX4O14627 AL022161.1-201ENST00000604390 213 ntBASIC2.98□□□□□ -1.93
CDX4O14627 AL451064.1-201ENST00000607718 471 ntBASIC2.98□□□□□ -1.93
CDX4O14627 AC131235.4-201ENST00000609288 620 ntBASIC2.98□□□□□ -1.93
CDX4O14627 AL450489.1-201ENST00000612071 468 ntBASIC2.98□□□□□ -1.93
CDX4O14627 AC092650.2-201ENST00000619984 902 ntBASIC2.98□□□□□ -1.93
CDX4O14627 AC116618.1-201ENST00000634617 774 ntBASIC2.98□□□□□ -1.93
CDX4O14627 MIR3974-201ENST00000637126 96 ntBASIC2.98□□□□□ -1.93
CDX4O14627 U6.101-201ENST00000637707 76 ntBASIC2.98□□□□□ -1.93
CDX4O14627 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
CDX4O14627 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
CDX4O14627 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CDX4O14627 RNU6-157P-201ENST00000383957 107 ntBASIC2.97□□□□□ -1.93
CDX4O14627 SNORA18.3-201ENST00000384122 132 ntBASIC2.97□□□□□ -1.93
CDX4O14627 RNU1-89P-201ENST00000384592 164 ntBASIC2.97□□□□□ -1.93
CDX4O14627 AL031679.1-201ENST00000400616 525 ntBASIC2.97□□□□□ -1.93
CDX4O14627 RSL24D1P4-201ENST00000400938 484 ntBASIC2.97□□□□□ -1.93
CDX4O14627 RPL7P25-201ENST00000404151 721 ntBASIC2.97□□□□□ -1.93
CDX4O14627 AL138880.1-201ENST00000405824 642 ntBASIC2.97□□□□□ -1.93
CDX4O14627 AL450338.1-201ENST00000407987 512 ntBASIC2.97□□□□□ -1.93
CDX4O14627 AC068533.2-201ENST00000411872 306 ntBASIC2.97□□□□□ -1.93
CDX4O14627 TOMM22P1-201ENST00000418578 312 ntBASIC2.97□□□□□ -1.93
CDX4O14627 AIMP1P1-201ENST00000418670 937 ntBASIC2.97□□□□□ -1.93
CDX4O14627 AC006960.1-201ENST00000419980 153 ntBASIC2.97□□□□□ -1.93
CDX4O14627 AC006548.1-201ENST00000427470 102 ntBASIC2.97□□□□□ -1.93
CDX4O14627 RPL23AP82-202ENST00000427528 469 ntBASIC2.97□□□□□ -1.93
CDX4O14627 AL365396.1-201ENST00000430854 671 ntBASIC2.97□□□□□ -1.93
CDX4O14627 MTND1P32-201ENST00000433043 938 ntBASIC2.97□□□□□ -1.93
CDX4O14627 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.97□□□□□ -1.93
CDX4O14627 CST9LP2-201ENST00000437612 320 ntBASIC2.97□□□□□ -1.93
CDX4O14627 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.97□□□□□ -1.93
CDX4O14627 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.97□□□□□ -1.93
CDX4O14627 MTND2P19-201ENST00000449129 1012 ntBASIC2.97□□□□□ -1.93
CDX4O14627 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.97□□□□□ -1.93
CDX4O14627 RPL12P26-201ENST00000452430 487 ntBASIC2.97□□□□□ -1.93
CDX4O14627 CFTRP1-201ENST00000456646 183 ntBASIC2.97□□□□□ -1.93
CDX4O14627 AC026410.2-201ENST00000460281 156 ntBASIC2.97□□□□□ -1.93
CDX4O14627 AC010468.1-201ENST00000461022 817 ntBASIC2.97□□□□□ -1.93
CDX4O14627 CENPBD1P1-201ENST00000464061 469 ntBASIC2.97□□□□□ -1.93
CDX4O14627 RPS15AP17-201ENST00000470598 390 ntBASIC2.97□□□□□ -1.93
CDX4O14627 TRBV12-1-201ENST00000479785 344 ntBASIC2.97□□□□□ -1.93
CDX4O14627 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CDX4O14627 AC010587.2-201ENST00000511727 448 ntBASIC2.97□□□□□ -1.93
CDX4O14627 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.97□□□□□ -1.93
CDX4O14627 AC114781.4-201ENST00000513707 639 ntBASIC2.97□□□□□ -1.93
CDX4O14627 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.97□□□□□ -1.93
CDX4O14627 MTCO1P47-201ENST00000523889 1271 ntBASIC2.97□□□□□ -1.93
CDX4O14627 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms