Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.2□□□□□ -1.74
TRIM38O00635 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.2□□□□□ -1.74
TRIM38O00635 KLF3P2-201ENST00000465138 268 ntBASIC4.2□□□□□ -1.74
TRIM38O00635 RN7SL542P-201ENST00000467147 294 ntBASIC4.2□□□□□ -1.74
TRIM38O00635 RN7SL585P-201ENST00000470538 280 ntBASIC4.2□□□□□ -1.74
TRIM38O00635 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.2□□□□□ -1.74
TRIM38O00635 AC112204.1-201ENST00000502591 103 ntBASIC4.2□□□□□ -1.74
TRIM38O00635 HMGB1P22-201ENST00000505315 124 ntBASIC4.2□□□□□ -1.74
TRIM38O00635 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.2□□□□□ -1.74
TRIM38O00635 AC025554.1-201ENST00000505641 188 ntBASIC4.2□□□□□ -1.74
TRIM38O00635 AC005921.1-201ENST00000510589 286 ntBASIC4.2□□□□□ -1.74
TRIM38O00635 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.2□□□□□ -1.74
TRIM38O00635 AC103783.1-201ENST00000520506 373 ntBASIC4.2□□□□□ -1.74
TRIM38O00635 CENPUP1-201ENST00000526649 1202 ntBASIC4.2□□□□□ -1.74
TRIM38O00635 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.2□□□□□ -1.74
TRIM38O00635 AC126177.3-201ENST00000551839 688 ntBASIC4.2□□□□□ -1.74
TRIM38O00635 AC006270.2-201ENST00000578523 652 ntBASIC4.2□□□□□ -1.74
TRIM38O00635 BNIP3P22-201ENST00000593399 556 ntBASIC4.2□□□□□ -1.74
TRIM38O00635 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.2□□□□□ -1.74
TRIM38O00635 XIAPP1-201ENST00000603162 600 ntBASIC4.2□□□□□ -1.74
TRIM38O00635 AC104458.1-201ENST00000608243 463 ntBASIC4.2□□□□□ -1.74
TRIM38O00635 AC011460.1-201ENST00000636268 1834 ntBASIC4.2□□□□□ -1.74
TRIM38O00635 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM38O00635 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.2□□□□□ -1.74
TRIM38O00635 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.2□□□□□ -1.74
TRIM38O00635 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM38O00635 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM38O00635 TEX21P-201ENST00000447107 1476 ntBASIC4.19□□□□□ -1.74
TRIM38O00635 AC006026.1-201ENST00000444025 1803 ntBASIC4.19□□□□□ -1.74
TRIM38O00635 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
TRIM38O00635 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
TRIM38O00635 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.19□□□□□ -1.74
TRIM38O00635 XIAPP3-201ENST00000312918 795 ntBASIC4.19□□□□□ -1.74
TRIM38O00635 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM38O00635 RNU5E-5P-201ENST00000365379 116 ntBASIC4.19□□□□□ -1.74
TRIM38O00635 RNA5SP167-201ENST00000365461 116 ntBASIC4.19□□□□□ -1.74
TRIM38O00635 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.19□□□□□ -1.74
TRIM38O00635 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.19□□□□□ -1.74
TRIM38O00635 RNU6-1181P-201ENST00000384191 106 ntBASIC4.19□□□□□ -1.74
TRIM38O00635 SNORD115.1-201ENST00000391109 76 ntBASIC4.19□□□□□ -1.74
TRIM38O00635 AL356057.2-201ENST00000403318 432 ntBASIC4.19□□□□□ -1.74
TRIM38O00635 CIR1P3-201ENST00000405137 479 ntBASIC4.19□□□□□ -1.74
TRIM38O00635 AL359704.1-201ENST00000411586 781 ntBASIC4.19□□□□□ -1.74
TRIM38O00635 AL139413.1-201ENST00000421309 217 ntBASIC4.19□□□□□ -1.74
TRIM38O00635 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.19□□□□□ -1.74
TRIM38O00635 AC073614.1-201ENST00000438690 650 ntBASIC4.19□□□□□ -1.74
TRIM38O00635 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM38O00635 RPL21P89-201ENST00000444021 467 ntBASIC4.19□□□□□ -1.74
TRIM38O00635 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM38O00635 AC010655.1-201ENST00000449336 292 ntBASIC4.19□□□□□ -1.74
TRIM38O00635 DNAJC19P1-201ENST00000455312 319 ntBASIC4.19□□□□□ -1.74
TRIM38O00635 RPS20P32-201ENST00000456044 356 ntBASIC4.19□□□□□ -1.74
TRIM38O00635 RN7SL132P-201ENST00000478131 296 ntBASIC4.19□□□□□ -1.74
TRIM38O00635 RPL7P23-201ENST00000493874 747 ntBASIC4.19□□□□□ -1.74
TRIM38O00635 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.19□□□□□ -1.74
TRIM38O00635 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM38O00635 AC099522.1-202ENST00000514718 367 ntBASIC4.19□□□□□ -1.74
TRIM38O00635 SNORA67.7-201ENST00000516664 135 ntBASIC4.19□□□□□ -1.74
TRIM38O00635 SNORA31.20-201ENST00000517111 133 ntBASIC4.19□□□□□ -1.74
TRIM38O00635 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.19□□□□□ -1.74
TRIM38O00635 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.19□□□□□ -1.74
TRIM38O00635 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM38O00635 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.19□□□□□ -1.74
TRIM38O00635 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.19□□□□□ -1.74
TRIM38O00635 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM38O00635 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM38O00635 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.19□□□□□ -1.74
TRIM38O00635 AC006504.3-201ENST00000586818 523 ntBASIC4.19□□□□□ -1.74
TRIM38O00635 AC068790.5-201ENST00000602741 355 ntBASIC4.19□□□□□ -1.74
TRIM38O00635 AL022154.1-201ENST00000604698 785 ntBASIC4.19□□□□□ -1.74
TRIM38O00635 FAM27D1-201ENST00000612308 341 ntBASIC4.19□□□□□ -1.74
TRIM38O00635 MIR6875-201ENST00000617506 72 ntBASIC4.19□□□□□ -1.74
TRIM38O00635 AC018555.1-201ENST00000567548 1980 ntBASIC4.19□□□□□ -1.74
TRIM38O00635 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.19□□□□□ -1.74
TRIM38O00635 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.19□□□□□ -1.74
TRIM38O00635 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
TRIM38O00635 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM38O00635 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM38O00635 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM38O00635 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM38O00635 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM38O00635 RNA5SP189-201ENST00000364920 115 ntBASIC4.18□□□□□ -1.74
TRIM38O00635 RNU6-629P-201ENST00000384061 103 ntBASIC4.18□□□□□ -1.74
TRIM38O00635 RNU6-692P-201ENST00000384496 107 ntBASIC4.18□□□□□ -1.74
TRIM38O00635 MIR607-201ENST00000385241 96 ntBASIC4.18□□□□□ -1.74
TRIM38O00635 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
TRIM38O00635 MTCYBP36-201ENST00000404146 440 ntBASIC4.18□□□□□ -1.74
TRIM38O00635 RN7SKP202-201ENST00000410439 330 ntBASIC4.18□□□□□ -1.74
TRIM38O00635 EEF1A1P40-201ENST00000412883 573 ntBASIC4.18□□□□□ -1.74
TRIM38O00635 RAC1P3-201ENST00000416129 580 ntBASIC4.18□□□□□ -1.74
TRIM38O00635 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM38O00635 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM38O00635 MTATP6P30-201ENST00000443540 664 ntBASIC4.18□□□□□ -1.74
TRIM38O00635 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM38O00635 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM38O00635 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM38O00635 AP000926.1-201ENST00000479573 241 ntBASIC4.18□□□□□ -1.74
TRIM38O00635 RPL31P13-201ENST00000484151 370 ntBASIC4.18□□□□□ -1.74
TRIM38O00635 RPL23AP41-201ENST00000484754 458 ntBASIC4.18□□□□□ -1.74
TRIM38O00635 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms