Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 VDAC1P3-201ENST00000434069 851 ntBASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL590103.1-201ENST00000434488 307 ntBASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 SETP8-201ENST00000435341 628 ntBASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC020699.1-201ENST00000505161 445 ntBASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC113347.3-201ENST00000509113 148 ntBASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 MTCYBP16-201ENST00000509187 1129 ntBASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC008837.2-201ENST00000513076 418 ntBASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 RN7SKP277-201ENST00000516895 283 ntBASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC079600.2-201ENST00000550076 130 ntBASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 MIR3945-201ENST00000581853 98 ntBASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC090616.5-202ENST00000582111 297 ntBASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 VN1R90P-201ENST00000595717 726 ntBASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 FAM157B-203ENST00000639350 358 ntBASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 HMGB1P5-201ENST00000255320 642 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 RPL9P7-201ENST00000330965 580 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 RNU4-82P-201ENST00000362443 140 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 RNU6-859P-201ENST00000362728 107 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 RNU6-115P-201ENST00000364310 107 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 RNU4-68P-201ENST00000364314 141 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 RNU6-1226P-201ENST00000384317 107 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL133264.1-201ENST00000407157 562 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 RNA5SP508-201ENST00000411327 119 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL161449.1-201ENST00000414531 1199 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC007435.1-201ENST00000421086 415 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 SEPT7P5-201ENST00000434048 306 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 USP9YP24-201ENST00000434374 697 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 USP9YP17-201ENST00000444617 696 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL359893.1-201ENST00000447628 1580 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 RPL7P52-201ENST00000449200 742 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 EEF1B2P7-201ENST00000451177 676 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC011979.1-201ENST00000472300 483 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC087879.1-201ENST00000474343 374 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 RPS26P21-201ENST00000475397 348 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 HMGN2P13-201ENST00000476476 274 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC069528.1-202ENST00000482888 637 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 VPS26AP1-201ENST00000483197 979 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 SNORA48.10-201ENST00000516965 160 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 AP001317.1-201ENST00000531194 960 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 OR8K4P-201ENST00000534608 872 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 ELOCP31-201ENST00000540463 467 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL109653.1-201ENST00000603091 248 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC007566.2-201ENST00000603642 413 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC069545.1-201ENST00000605671 358 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL390240.1-201ENST00000612950 384 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC107075.1-201ENST00000613695 314 ntBASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.72□□□□□ -1.97
TMX2-CTNND1H3BSU7 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
TMX2-CTNND1H3BSU7 RNU4-92P-201ENST00000363783 136 ntBASIC2.71□□□□□ -1.98
TMX2-CTNND1H3BSU7 SNORA25.6-201ENST00000364121 118 ntBASIC2.71□□□□□ -1.98
TMX2-CTNND1H3BSU7 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.71□□□□□ -1.98
TMX2-CTNND1H3BSU7 MIR649-201ENST00000384843 97 ntBASIC2.71□□□□□ -1.98
TMX2-CTNND1H3BSU7 MIR513B-201ENST00000385136 84 ntBASIC2.71□□□□□ -1.98
TMX2-CTNND1H3BSU7 RNU6-1300P-201ENST00000391046 108 ntBASIC2.71□□□□□ -1.98
TMX2-CTNND1H3BSU7 AL450338.1-201ENST00000407987 512 ntBASIC2.71□□□□□ -1.98
TMX2-CTNND1H3BSU7 RNA5SP21-201ENST00000410917 96 ntBASIC2.71□□□□□ -1.98
TMX2-CTNND1H3BSU7 RPL7P8-201ENST00000411964 730 ntBASIC2.71□□□□□ -1.98
TMX2-CTNND1H3BSU7 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.71□□□□□ -1.98
TMX2-CTNND1H3BSU7 RPS15AP40-201ENST00000419621 391 ntBASIC2.71□□□□□ -1.98
TMX2-CTNND1H3BSU7 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.71□□□□□ -1.98
TMX2-CTNND1H3BSU7 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.71□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC241584.1-201ENST00000438469 1241 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms