Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SMKR1H3BMG3 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SMKR1H3BMG3 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.28□□□□□ -2.04
SMKR1H3BMG3 AL672167.1-206ENST00000356293 943 ntBASIC2.28□□□□□ -2.04
SMKR1H3BMG3 U8.9-201ENST00000365667 134 ntBASIC2.28□□□□□ -2.04
SMKR1H3BMG3 ERHP2-201ENST00000402323 299 ntBASIC2.28□□□□□ -2.04
SMKR1H3BMG3 AL136310.1-201ENST00000404926 654 ntBASIC2.28□□□□□ -2.04
SMKR1H3BMG3 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SMKR1H3BMG3 RNU6-516P-201ENST00000411381 104 ntBASIC2.28□□□□□ -2.04
SMKR1H3BMG3 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.28□□□□□ -2.04
SMKR1H3BMG3 AL358075.3-201ENST00000426289 226 ntBASIC2.28□□□□□ -2.04
SMKR1H3BMG3 AC091390.3-201ENST00000426478 338 ntBASIC2.28□□□□□ -2.04
SMKR1H3BMG3 RPL7P2-201ENST00000427639 268 ntBASIC2.28□□□□□ -2.04
SMKR1H3BMG3 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.28□□□□□ -2.04
SMKR1H3BMG3 ZYG11AP1-201ENST00000430329 837 ntBASIC2.28□□□□□ -2.04
SMKR1H3BMG3 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.28□□□□□ -2.04
SMKR1H3BMG3 AC073387.1-201ENST00000453261 709 ntBASIC2.28□□□□□ -2.04
SMKR1H3BMG3 SNORD105B-201ENST00000458770 79 ntBASIC2.28□□□□□ -2.04
SMKR1H3BMG3 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.28□□□□□ -2.04
SMKR1H3BMG3 AC231760.1-201ENST00000498002 260 ntBASIC2.28□□□□□ -2.04
SMKR1H3BMG3 AC138853.1-201ENST00000503549 823 ntBASIC2.28□□□□□ -2.04
SMKR1H3BMG3 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.28□□□□□ -2.04
SMKR1H3BMG3 SEM1P1-201ENST00000506694 209 ntBASIC2.28□□□□□ -2.04
SMKR1H3BMG3 AC024589.1-201ENST00000512207 263 ntBASIC2.28□□□□□ -2.04
SMKR1H3BMG3 RN7SKP18-201ENST00000516005 275 ntBASIC2.28□□□□□ -2.04
SMKR1H3BMG3 RN7SKP43-201ENST00000516173 320 ntBASIC2.28□□□□□ -2.04
SMKR1H3BMG3 RNA5SP291-201ENST00000517222 105 ntBASIC2.28□□□□□ -2.04
SMKR1H3BMG3 NRON-201ENST00000517270 370 ntBASIC2.28□□□□□ -2.04
SMKR1H3BMG3 HMGN1P28-201ENST00000521340 364 ntBASIC2.28□□□□□ -2.04
SMKR1H3BMG3 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.28□□□□□ -2.04
SMKR1H3BMG3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.28□□□□□ -2.04
SMKR1H3BMG3 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC2.28□□□□□ -2.04
SMKR1H3BMG3 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.28□□□□□ -2.04
SMKR1H3BMG3 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.28□□□□□ -2.04
SMKR1H3BMG3 AC005498.1-201ENST00000592125 465 ntBASIC2.28□□□□□ -2.04
SMKR1H3BMG3 AC020914.6-201ENST00000594327 272 ntBASIC2.28□□□□□ -2.04
SMKR1H3BMG3 AC078899.3-201ENST00000599065 212 ntBASIC2.28□□□□□ -2.04
SMKR1H3BMG3 AF129408.1-201ENST00000608767 431 ntBASIC2.28□□□□□ -2.04
SMKR1H3BMG3 AL157817.1-201ENST00000614264 790 ntBASIC2.28□□□□□ -2.04
SMKR1H3BMG3 AC083809.1-201ENST00000615051 472 ntBASIC2.28□□□□□ -2.04
SMKR1H3BMG3 MIR6758-201ENST00000620653 63 ntBASIC2.28□□□□□ -2.04
SMKR1H3BMG3 AC019226.1-201ENST00000625666 515 ntBASIC2.28□□□□□ -2.04
SMKR1H3BMG3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.28□□□□□ -2.04
SMKR1H3BMG3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.28□□□□□ -2.04
SMKR1H3BMG3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.05
SMKR1H3BMG3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.27□□□□□ -2.05
SMKR1H3BMG3 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.27□□□□□ -2.05
SMKR1H3BMG3 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SMKR1H3BMG3 MIR181B1-201ENST00000385240 110 ntBASIC2.27□□□□□ -2.05
SMKR1H3BMG3 AC110754.1-201ENST00000399740 601 ntBASIC2.27□□□□□ -2.05
SMKR1H3BMG3 MIR887-201ENST00000401258 79 ntBASIC2.27□□□□□ -2.05
SMKR1H3BMG3 AL109755.1-201ENST00000401791 649 ntBASIC2.27□□□□□ -2.05
SMKR1H3BMG3 METTL5-204ENST00000409340 472 ntTSL 5 BASIC2.27□□□□□ -2.05
SMKR1H3BMG3 BX323014.1-201ENST00000412876 237 ntBASIC2.27□□□□□ -2.05
SMKR1H3BMG3 MTATP6P20-201ENST00000414147 562 ntBASIC2.27□□□□□ -2.05
SMKR1H3BMG3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.27□□□□□ -2.05
SMKR1H3BMG3 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.27□□□□□ -2.05
SMKR1H3BMG3 ATP5F1P1-201ENST00000433775 569 ntBASIC2.27□□□□□ -2.05
SMKR1H3BMG3 SNRPEP7-201ENST00000438350 220 ntBASIC2.27□□□□□ -2.05
SMKR1H3BMG3 AC108734.1-201ENST00000439549 399 ntBASIC2.27□□□□□ -2.05
SMKR1H3BMG3 CYCSP32-201ENST00000440548 321 ntBASIC2.27□□□□□ -2.05
SMKR1H3BMG3 FGF7P5-201ENST00000441829 291 ntBASIC2.27□□□□□ -2.05
SMKR1H3BMG3 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.27□□□□□ -2.05
SMKR1H3BMG3 AC009296.1-201ENST00000443146 155 ntBASIC2.27□□□□□ -2.05
SMKR1H3BMG3 RPS15AP27-201ENST00000449183 343 ntBASIC2.27□□□□□ -2.05
SMKR1H3BMG3 MEMO1P3-201ENST00000459811 302 ntBASIC2.27□□□□□ -2.05
SMKR1H3BMG3 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.27□□□□□ -2.05
SMKR1H3BMG3 AC026979.1-201ENST00000492525 396 ntBASIC2.27□□□□□ -2.05
SMKR1H3BMG3 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.27□□□□□ -2.05
SMKR1H3BMG3 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.27□□□□□ -2.05
SMKR1H3BMG3 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.27□□□□□ -2.05
SMKR1H3BMG3 AC104619.4-201ENST00000510773 249 ntBASIC2.27□□□□□ -2.05
SMKR1H3BMG3 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC2.27□□□□□ -2.05
SMKR1H3BMG3 AC109445.1-201ENST00000512356 383 ntBASIC2.27□□□□□ -2.05
SMKR1H3BMG3 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC2.27□□□□□ -2.05
SMKR1H3BMG3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.27□□□□□ -2.05
SMKR1H3BMG3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.27□□□□□ -2.05
SMKR1H3BMG3 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.27□□□□□ -2.05
SMKR1H3BMG3 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.27□□□□□ -2.05
SMKR1H3BMG3 AC103843.2-201ENST00000530523 682 ntBASIC2.27□□□□□ -2.05
SMKR1H3BMG3 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.27□□□□□ -2.05
SMKR1H3BMG3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.27□□□□□ -2.05
SMKR1H3BMG3 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.27□□□□□ -2.05
SMKR1H3BMG3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SMKR1H3BMG3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SMKR1H3BMG3 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SMKR1H3BMG3 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.27□□□□□ -2.05
SMKR1H3BMG3 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.27□□□□□ -2.05
SMKR1H3BMG3 AL157394.1-201ENST00000562983 1224 ntBASIC2.27□□□□□ -2.05
SMKR1H3BMG3 AC069431.2-201ENST00000604149 1099 ntBASIC2.27□□□□□ -2.05
SMKR1H3BMG3 U3.45-201ENST00000607547 219 ntBASIC2.27□□□□□ -2.05
SMKR1H3BMG3 AC131235.4-201ENST00000609288 620 ntBASIC2.27□□□□□ -2.05
SMKR1H3BMG3 uc_338.25-201ENST00000613756 156 ntBASIC2.27□□□□□ -2.05
SMKR1H3BMG3 CR392039.5-201ENST00000623201 510 ntBASIC2.27□□□□□ -2.05
SMKR1H3BMG3 RNA5SP196-201ENST00000625967 102 ntBASIC2.27□□□□□ -2.05
SMKR1H3BMG3 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.27□□□□□ -2.05
SMKR1H3BMG3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SMKR1H3BMG3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.27□□□□□ -2.05
SMKR1H3BMG3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.27□□□□□ -2.05
SMKR1H3BMG3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms