Protein–RNA interactions for Protein: Q9Y2N7

HIF3A, Hypoxia-inducible factor 3-alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3AQ9Y2N7 AC104576.1-201ENST00000524225 88 ntBASIC4.97□□□□□ -1.61
HIF3AQ9Y2N7 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.97□□□□□ -1.61
HIF3AQ9Y2N7 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.97□□□□□ -1.61
HIF3AQ9Y2N7 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.97□□□□□ -1.61
HIF3AQ9Y2N7 AC127381.1-201ENST00000555979 939 ntBASIC4.97□□□□□ -1.61
HIF3AQ9Y2N7 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.97□□□□□ -1.61
HIF3AQ9Y2N7 AC130289.1-201ENST00000577321 73 ntBASIC4.97□□□□□ -1.61
HIF3AQ9Y2N7 HMGB2P1-201ENST00000591146 634 ntBASIC4.97□□□□□ -1.61
HIF3AQ9Y2N7 AC010900.2-201ENST00000604508 210 ntBASIC4.97□□□□□ -1.61
HIF3AQ9Y2N7 AL034351.1-201ENST00000605288 668 ntBASIC4.97□□□□□ -1.61
HIF3AQ9Y2N7 AL118522.2-201ENST00000616045 615 ntBASIC4.97□□□□□ -1.61
HIF3AQ9Y2N7 MIR6130-201ENST00000619419 109 ntBASIC4.97□□□□□ -1.61
HIF3AQ9Y2N7 AC130454.1-201ENST00000622948 401 ntBASIC4.97□□□□□ -1.61
HIF3AQ9Y2N7 MIR4496-201ENST00000635896 61 ntBASIC4.97□□□□□ -1.61
HIF3AQ9Y2N7 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
HIF3AQ9Y2N7 AC005332.5-201ENST00000591222 2919 ntBASIC4.97□□□□□ -1.61
HIF3AQ9Y2N7 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
HIF3AQ9Y2N7 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HIF3AQ9Y2N7 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HIF3AQ9Y2N7 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HIF3AQ9Y2N7 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
HIF3AQ9Y2N7 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HIF3AQ9Y2N7 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.97□□□□□ -1.61
HIF3AQ9Y2N7 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
HIF3AQ9Y2N7 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HIF3AQ9Y2N7 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HIF3AQ9Y2N7 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HIF3AQ9Y2N7 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HIF3AQ9Y2N7 MUC2-202ENST00000613187 4845 ntBASIC4.97□□□□□ -1.61
HIF3AQ9Y2N7 AL450326.2-201ENST00000421913 1962 ntBASIC4.96□□□□□ -1.61
HIF3AQ9Y2N7 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
HIF3AQ9Y2N7 AC083843.2-201ENST00000568248 6253 ntBASIC4.96□□□□□ -1.61
HIF3AQ9Y2N7 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.61
HIF3AQ9Y2N7 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 OR52B3P-201ENST00000314715 928 ntBASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 RN7SKP269-201ENST00000365545 319 ntBASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 Y_RNA.478-201ENST00000384358 107 ntBASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 Y_RNA.551-201ENST00000384661 102 ntBASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 MIR551A-201ENST00000385042 96 ntBASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 CYB5AP4-201ENST00000396692 399 ntBASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 AC092447.6-201ENST00000414578 210 ntBASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 AL391219.1-201ENST00000422570 483 ntBASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 GEMIN8P3-201ENST00000445417 720 ntBASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 AC092647.2-201ENST00000452998 253 ntBASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 AC018638.3-201ENST00000461273 132 ntBASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 AC011005.2-201ENST00000487324 359 ntBASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 RN7SL101P-201ENST00000496350 279 ntBASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 AP003733.2-201ENST00000529409 171 ntBASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 AC090022.1-201ENST00000546569 311 ntBASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 AC002044.1-201ENST00000606707 158 ntBASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 AP001029.2-203ENST00000589795 4910 ntBASIC4.96□□□□□ -1.62
HIF3AQ9Y2N7 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HIF3AQ9Y2N7 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HIF3AQ9Y2N7 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.95□□□□□ -1.62
HIF3AQ9Y2N7 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HIF3AQ9Y2N7 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
HIF3AQ9Y2N7 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HIF3AQ9Y2N7 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
HIF3AQ9Y2N7 RNU6-280P-201ENST00000364145 104 ntBASIC4.95□□□□□ -1.62
HIF3AQ9Y2N7 RNU6-1303P-201ENST00000364841 107 ntBASIC4.95□□□□□ -1.62
HIF3AQ9Y2N7 AC013442.1-201ENST00000397347 228 ntBASIC4.95□□□□□ -1.62
HIF3AQ9Y2N7 MIR1250-201ENST00000408098 113 ntBASIC4.95□□□□□ -1.62
HIF3AQ9Y2N7 SYF2P2-201ENST00000417620 583 ntBASIC4.95□□□□□ -1.62
HIF3AQ9Y2N7 ELOCP18-201ENST00000434209 337 ntBASIC4.95□□□□□ -1.62
HIF3AQ9Y2N7 AC104332.1-201ENST00000440471 797 ntBASIC4.95□□□□□ -1.62
HIF3AQ9Y2N7 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.95□□□□□ -1.62
HIF3AQ9Y2N7 RPS3AP46-201ENST00000448352 682 ntBASIC4.95□□□□□ -1.62
HIF3AQ9Y2N7 AL445665.1-202ENST00000452436 324 ntBASIC4.95□□□□□ -1.62
HIF3AQ9Y2N7 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.95□□□□□ -1.62
HIF3AQ9Y2N7 RPL23AP31-201ENST00000456160 467 ntBASIC4.95□□□□□ -1.62
HIF3AQ9Y2N7 AP000942.1-201ENST00000463969 747 ntBASIC4.95□□□□□ -1.62
HIF3AQ9Y2N7 FTH1P2-201ENST00000466086 412 ntBASIC4.95□□□□□ -1.62
HIF3AQ9Y2N7 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.95□□□□□ -1.62
HIF3AQ9Y2N7 AP000797.2-201ENST00000475768 606 ntBASIC4.95□□□□□ -1.62
HIF3AQ9Y2N7 MED28P2-201ENST00000475771 317 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms