Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CNTN3Q9P232 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.46□□□□□ -1.54
CNTN3Q9P232 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CNTN3Q9P232 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CNTN3Q9P232 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CNTN3Q9P232 AC027287.1-201ENST00000553115 1453 ntBASIC5.45□□□□□ -1.54
CNTN3Q9P232 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CNTN3Q9P232 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.45□□□□□ -1.54
CNTN3Q9P232 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CNTN3Q9P232 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.45□□□□□ -1.54
CNTN3Q9P232 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CNTN3Q9P232 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.45□□□□□ -1.54
CNTN3Q9P232 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CNTN3Q9P232 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CNTN3Q9P232 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CNTN3Q9P232 RNU6-490P-201ENST00000362985 107 ntBASIC5.45□□□□□ -1.54
CNTN3Q9P232 RNU4-44P-201ENST00000363050 141 ntBASIC5.45□□□□□ -1.54
CNTN3Q9P232 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.45□□□□□ -1.54
CNTN3Q9P232 RNU6-339P-201ENST00000384310 107 ntBASIC5.45□□□□□ -1.54
CNTN3Q9P232 RNU6-434P-201ENST00000384376 107 ntBASIC5.45□□□□□ -1.54
CNTN3Q9P232 RNY1P14-201ENST00000384426 108 ntBASIC5.45□□□□□ -1.54
CNTN3Q9P232 RNU6-393P-201ENST00000384475 107 ntBASIC5.45□□□□□ -1.54
CNTN3Q9P232 Y_RNA.527-201ENST00000384573 102 ntBASIC5.45□□□□□ -1.54
CNTN3Q9P232 Y_RNA.556-201ENST00000384677 113 ntBASIC5.45□□□□□ -1.54
CNTN3Q9P232 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CNTN3Q9P232 RNU2-47P-201ENST00000410649 186 ntBASIC5.45□□□□□ -1.54
CNTN3Q9P232 UBE2FP1-201ENST00000416536 447 ntBASIC5.45□□□□□ -1.54
CNTN3Q9P232 E2F6P2-201ENST00000420708 748 ntBASIC5.45□□□□□ -1.54
CNTN3Q9P232 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.45□□□□□ -1.54
CNTN3Q9P232 OR2AM1P-201ENST00000422137 422 ntBASIC5.45□□□□□ -1.54
CNTN3Q9P232 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC5.45□□□□□ -1.54
CNTN3Q9P232 AC093151.1-201ENST00000427711 313 ntBASIC5.45□□□□□ -1.54
CNTN3Q9P232 COX6CP13-201ENST00000428703 226 ntBASIC5.45□□□□□ -1.54
CNTN3Q9P232 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.45□□□□□ -1.54
CNTN3Q9P232 CYCSP24-201ENST00000445119 316 ntBASIC5.45□□□□□ -1.54
CNTN3Q9P232 RPS3AP41-201ENST00000462701 778 ntBASIC5.45□□□□□ -1.54
CNTN3Q9P232 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.45□□□□□ -1.54
CNTN3Q9P232 Y_RNA.661-201ENST00000516003 99 ntBASIC5.45□□□□□ -1.54
CNTN3Q9P232 AC105031.1-201ENST00000518550 476 ntBASIC5.45□□□□□ -1.54
CNTN3Q9P232 IL7-206ENST00000520269 456 ntTSL 3 BASIC5.45□□□□□ -1.54
CNTN3Q9P232 AP006245.2-201ENST00000522004 300 ntBASIC5.45□□□□□ -1.54
CNTN3Q9P232 CR383656.7-201ENST00000548164 174 ntBASIC5.45□□□□□ -1.54
CNTN3Q9P232 MYL12BP1-201ENST00000569826 507 ntBASIC5.45□□□□□ -1.54
CNTN3Q9P232 PRPF19P1-201ENST00000584766 898 ntBASIC5.45□□□□□ -1.54
CNTN3Q9P232 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
CNTN3Q9P232 AL031320.1-201ENST00000604177 357 ntBASIC5.45□□□□□ -1.54
CNTN3Q9P232 AL031176.1-201ENST00000604554 466 ntBASIC5.45□□□□□ -1.54
CNTN3Q9P232 AL354984.3-201ENST00000604803 325 ntBASIC5.45□□□□□ -1.54
CNTN3Q9P232 AL670379.4-201ENST00000605279 254 ntBASIC5.45□□□□□ -1.54
CNTN3Q9P232 Mico1.1-201ENST00000611698 204 ntBASIC5.45□□□□□ -1.54
CNTN3Q9P232 AC006157.1-201ENST00000611750 366 ntBASIC5.45□□□□□ -1.54
CNTN3Q9P232 AC138965.3-201ENST00000623875 498 ntBASIC5.45□□□□□ -1.54
CNTN3Q9P232 AC092608.2-201ENST00000624427 218 ntBASIC5.45□□□□□ -1.54
CNTN3Q9P232 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CNTN3Q9P232 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CNTN3Q9P232 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
CNTN3Q9P232 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.45□□□□□ -1.54
CNTN3Q9P232 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CNTN3Q9P232 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CNTN3Q9P232 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CNTN3Q9P232 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.45□□□□□ -1.54
CNTN3Q9P232 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CNTN3Q9P232 DDX10P1-201ENST00000448545 1933 ntBASIC5.44□□□□□ -1.54
CNTN3Q9P232 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CNTN3Q9P232 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CNTN3Q9P232 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CNTN3Q9P232 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.44□□□□□ -1.54
CNTN3Q9P232 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CNTN3Q9P232 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CNTN3Q9P232 MT-TR-201ENST00000387439 65 ntBASIC5.44□□□□□ -1.54
CNTN3Q9P232 RNU6-1050P-201ENST00000410388 107 ntBASIC5.44□□□□□ -1.54
CNTN3Q9P232 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC5.44□□□□□ -1.54
CNTN3Q9P232 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.44□□□□□ -1.54
CNTN3Q9P232 FAR2P4-202ENST00000425399 584 ntBASIC5.44□□□□□ -1.54
CNTN3Q9P232 AC093106.2-201ENST00000428212 385 ntBASIC5.44□□□□□ -1.54
CNTN3Q9P232 Z98949.2-201ENST00000440996 144 ntBASIC5.44□□□□□ -1.54
CNTN3Q9P232 RPL23AP33-201ENST00000442301 452 ntBASIC5.44□□□□□ -1.54
CNTN3Q9P232 AC234775.1-201ENST00000454247 670 ntBASIC5.44□□□□□ -1.54
CNTN3Q9P232 AC091180.1-201ENST00000462104 372 ntBASIC5.44□□□□□ -1.54
CNTN3Q9P232 RPL5P30-201ENST00000465511 891 ntBASIC5.44□□□□□ -1.54
CNTN3Q9P232 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.44□□□□□ -1.54
CNTN3Q9P232 AC087385.1-201ENST00000475062 312 ntBASIC5.44□□□□□ -1.54
CNTN3Q9P232 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.44□□□□□ -1.54
CNTN3Q9P232 RN7SL591P-201ENST00000496150 292 ntBASIC5.44□□□□□ -1.54
CNTN3Q9P232 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC5.44□□□□□ -1.54
CNTN3Q9P232 RNU6-1271P-201ENST00000517049 105 ntBASIC5.44□□□□□ -1.54
CNTN3Q9P232 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.44□□□□□ -1.54
CNTN3Q9P232 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.44□□□□□ -1.54
CNTN3Q9P232 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.44□□□□□ -1.54
CNTN3Q9P232 ATP1B3P1-201ENST00000605365 821 ntBASIC5.44□□□□□ -1.54
CNTN3Q9P232 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.44□□□□□ -1.54
CNTN3Q9P232 AC007998.5-201ENST00000622938 237 ntBASIC5.44□□□□□ -1.54
CNTN3Q9P232 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CNTN3Q9P232 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CNTN3Q9P232 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CNTN3Q9P232 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.44□□□□□ -1.54
CNTN3Q9P232 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.44□□□□□ -1.54
CNTN3Q9P232 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CNTN3Q9P232 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CNTN3Q9P232 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms