Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AC087883.1-201ENST00000551882 391 ntBASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 TPRKBP2-201ENST00000565969 475 ntBASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 AC055876.5-201ENST00000605667 259 ntBASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 AC131902.3-201ENST00000611767 581 ntBASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 uc_338.32-201ENST00000615087 172 ntBASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 U7.8-201ENST00000619968 63 ntBASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 AL008636.1-201ENST00000625038 1018 ntBASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 AC099654.13-201ENST00000639774 207 ntBASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 TNPO1P3-201ENST00000436471 2662 ntBASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 RN7SKP226-201ENST00000364912 300 ntBASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 RNU6-744P-201ENST00000365557 107 ntBASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 RNU6-1316P-201ENST00000384242 108 ntBASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 MIR7-3-201ENST00000384898 110 ntBASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 NOTCH2P1-201ENST00000443481 624 ntBASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 USP9YP12-201ENST00000450481 570 ntBASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 AL645939.1-201ENST00000453429 797 ntBASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 RPS20P32-201ENST00000456044 356 ntBASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 OR6K1P-201ENST00000456766 971 ntBASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 HMGB3P30-201ENST00000457863 606 ntBASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 RPL7P24-201ENST00000493052 752 ntBASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 BTF3L4P4-201ENST00000506381 449 ntBASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 Vault.1-201ENST00000516474 102 ntBASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 AL133241.1-201ENST00000556832 487 ntBASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 ZNF519P3-201ENST00000557158 1032 ntBASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 SNORA51-201ENST00000606420 132 ntBASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 AC007684.1-201ENST00000609671 477 ntBASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 AC005344.1-201ENST00000613391 459 ntBASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 AL596245.1-201ENST00000618994 362 ntBASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 AC039056.2-201ENST00000622261 511 ntBASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 MAPK10-372ENST00000641954 3413 ntBASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 AP004289.2-201ENST00000444413 1457 ntBASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.91□□□□□ -1.78
NCKIPSDQ9NZQ3 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.9□□□□□ -1.78
NCKIPSDQ9NZQ3 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
NCKIPSDQ9NZQ3 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
NCKIPSDQ9NZQ3 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NCKIPSDQ9NZQ3 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.9□□□□□ -1.78
NCKIPSDQ9NZQ3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.78
NCKIPSDQ9NZQ3 RNU6-533P-201ENST00000384144 107 ntBASIC3.9□□□□□ -1.79
NCKIPSDQ9NZQ3 RNU6-1042P-201ENST00000384204 107 ntBASIC3.9□□□□□ -1.79
NCKIPSDQ9NZQ3 Y_RNA.582-201ENST00000391023 95 ntBASIC3.9□□□□□ -1.79
NCKIPSDQ9NZQ3 AL356421.1-201ENST00000403255 413 ntBASIC3.9□□□□□ -1.79
NCKIPSDQ9NZQ3 SNORA3.3-201ENST00000408712 125 ntBASIC3.9□□□□□ -1.79
NCKIPSDQ9NZQ3 MTCO1P17-201ENST00000411522 491 ntBASIC3.9□□□□□ -1.79
NCKIPSDQ9NZQ3 AC092447.6-201ENST00000414578 210 ntBASIC3.9□□□□□ -1.79
NCKIPSDQ9NZQ3 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
NCKIPSDQ9NZQ3 USP9YP13-201ENST00000417797 480 ntBASIC3.9□□□□□ -1.79
NCKIPSDQ9NZQ3 RPL30P16-201ENST00000419341 429 ntBASIC3.9□□□□□ -1.79
NCKIPSDQ9NZQ3 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NCKIPSDQ9NZQ3 AC244098.2-201ENST00000422068 99 ntBASIC3.9□□□□□ -1.79
NCKIPSDQ9NZQ3 AL445584.1-201ENST00000431451 330 ntBASIC3.9□□□□□ -1.79
NCKIPSDQ9NZQ3 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.9□□□□□ -1.79
NCKIPSDQ9NZQ3 NEK4P1-201ENST00000433383 879 ntBASIC3.9□□□□□ -1.79
NCKIPSDQ9NZQ3 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.9□□□□□ -1.79
NCKIPSDQ9NZQ3 USP9YP7-201ENST00000436723 430 ntBASIC3.9□□□□□ -1.79
NCKIPSDQ9NZQ3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.9□□□□□ -1.79
NCKIPSDQ9NZQ3 PGBD4P3-201ENST00000440731 581 ntBASIC3.9□□□□□ -1.79
NCKIPSDQ9NZQ3 PDSS1P2-201ENST00000449397 678 ntBASIC3.9□□□□□ -1.79
NCKIPSDQ9NZQ3 USP9YP32-201ENST00000452432 430 ntBASIC3.9□□□□□ -1.79
NCKIPSDQ9NZQ3 AC126182.1-201ENST00000478134 357 ntBASIC3.9□□□□□ -1.79
NCKIPSDQ9NZQ3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.9□□□□□ -1.79
NCKIPSDQ9NZQ3 AC093677.1-201ENST00000514414 678 ntBASIC3.9□□□□□ -1.79
NCKIPSDQ9NZQ3 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.9□□□□□ -1.79
NCKIPSDQ9NZQ3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NCKIPSDQ9NZQ3 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms