Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 AC124283.4-201ENST00000581815 456 ntBASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 AC013553.2-201ENST00000604244 589 ntBASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 AL136363.1-201ENST00000605349 337 ntBASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 AC025588.4-201ENST00000615802 908 ntBASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 AC011330.2-201ENST00000621680 635 ntBASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 U6.101-201ENST00000637707 76 ntBASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 OR5H6-203ENST00000642105 978 ntBASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 AC109315.1-201ENST00000584143 1347 ntBASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 RNU1-33P-201ENST00000364249 162 ntBASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 SYF2P2-201ENST00000417620 583 ntBASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 AC027644.1-201ENST00000419595 298 ntBASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 AL035246.1-201ENST00000433554 1255 ntBASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 MTCYBP3-201ENST00000445588 1137 ntBASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 DPPA3P1-201ENST00000448050 469 ntBASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 AC011753.1-201ENST00000451001 220 ntBASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 AL353691.1-201ENST00000451332 387 ntBASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 RNU6-420P-201ENST00000458780 107 ntBASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 SCGB1D5P-201ENST00000515134 247 ntBASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 AC093510.2-201ENST00000562820 896 ntBASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 TUG1_1.1-201ENST00000610654 145 ntBASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 AL592148.2-201ENST00000612210 372 ntBASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 AL034408.1-202ENST00000636088 415 ntBASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 AL163152.1-201ENST00000642001 374 ntBASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
VCX3AQ9NNX9 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
VCX3AQ9NNX9 RNU6-1066P-201ENST00000363573 105 ntBASIC2.4□□□□□ -2.03
VCX3AQ9NNX9 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.4□□□□□ -2.03
VCX3AQ9NNX9 U3.19-201ENST00000390893 196 ntBASIC2.4□□□□□ -2.03
VCX3AQ9NNX9 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
VCX3AQ9NNX9 AL162578.1-201ENST00000406202 378 ntBASIC2.4□□□□□ -2.03
VCX3AQ9NNX9 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
VCX3AQ9NNX9 AC069157.1-201ENST00000421749 137 ntBASIC2.4□□□□□ -2.03
VCX3AQ9NNX9 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.4□□□□□ -2.03
VCX3AQ9NNX9 AC022018.1-201ENST00000430685 241 ntBASIC2.4□□□□□ -2.03
VCX3AQ9NNX9 TAAR7P-201ENST00000436141 242 ntBASIC2.4□□□□□ -2.03
VCX3AQ9NNX9 AL158053.1-201ENST00000441503 453 ntBASIC2.4□□□□□ -2.03
VCX3AQ9NNX9 AC009237.8-201ENST00000445492 379 ntBASIC2.4□□□□□ -2.03
VCX3AQ9NNX9 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.4□□□□□ -2.03
VCX3AQ9NNX9 AP001992.1-205ENST00000462248 379 ntBASIC2.4□□□□□ -2.03
VCX3AQ9NNX9 AC008379.1-201ENST00000463655 464 ntBASIC2.4□□□□□ -2.03
VCX3AQ9NNX9 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.4□□□□□ -2.03
VCX3AQ9NNX9 BOLA3P3-201ENST00000505182 232 ntBASIC2.4□□□□□ -2.03
VCX3AQ9NNX9 AC092593.2-201ENST00000513866 913 ntBASIC2.4□□□□□ -2.03
VCX3AQ9NNX9 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.4□□□□□ -2.03
VCX3AQ9NNX9 GLYCAM1-201ENST00000546596 285 ntBASIC2.4□□□□□ -2.03
VCX3AQ9NNX9 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.4□□□□□ -2.03
VCX3AQ9NNX9 VN1R78P-201ENST00000597393 564 ntBASIC2.4□□□□□ -2.03
VCX3AQ9NNX9 BNIP3P11-201ENST00000603878 563 ntBASIC2.4□□□□□ -2.03
VCX3AQ9NNX9 AC067959.1-201ENST00000604334 379 ntBASIC2.4□□□□□ -2.03
VCX3AQ9NNX9 ZNF720P1-201ENST00000562403 1939 ntBASIC2.4□□□□□ -2.03
VCX3AQ9NNX9 AC135776.4-201ENST00000624300 1904 ntBASIC2.4□□□□□ -2.03
VCX3AQ9NNX9 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.4□□□□□ -2.03
VCX3AQ9NNX9 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
VCX3AQ9NNX9 AL359693.1-201ENST00000614959 2407 ntBASIC2.39□□□□□ -2.03
VCX3AQ9NNX9 AL589826.1-201ENST00000340697 249 ntBASIC2.39□□□□□ -2.03
VCX3AQ9NNX9 SNORA58B-201ENST00000364259 136 ntBASIC2.39□□□□□ -2.03
VCX3AQ9NNX9 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
VCX3AQ9NNX9 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.39□□□□□ -2.03
VCX3AQ9NNX9 SNORA51.11-201ENST00000384442 131 ntBASIC2.39□□□□□ -2.03
VCX3AQ9NNX9 RNU6-1035P-201ENST00000384477 107 ntBASIC2.39□□□□□ -2.03
VCX3AQ9NNX9 U3.20-201ENST00000390909 217 ntBASIC2.39□□□□□ -2.03
VCX3AQ9NNX9 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.39□□□□□ -2.03
VCX3AQ9NNX9 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.39□□□□□ -2.03
VCX3AQ9NNX9 AC007742.1-201ENST00000425789 329 ntBASIC2.39□□□□□ -2.03
VCX3AQ9NNX9 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.39□□□□□ -2.03
VCX3AQ9NNX9 C4BPAP2-201ENST00000428434 478 ntBASIC2.39□□□□□ -2.03
VCX3AQ9NNX9 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
VCX3AQ9NNX9 ELOCP26-201ENST00000436067 329 ntBASIC2.39□□□□□ -2.03
VCX3AQ9NNX9 AC000041.1-201ENST00000439655 175 ntBASIC2.39□□□□□ -2.03
VCX3AQ9NNX9 AL121871.1-201ENST00000443413 436 ntBASIC2.39□□□□□ -2.03
VCX3AQ9NNX9 AL513328.1-201ENST00000446460 224 ntBASIC2.39□□□□□ -2.03
VCX3AQ9NNX9 AC005297.2-201ENST00000450430 606 ntBASIC2.39□□□□□ -2.03
VCX3AQ9NNX9 AC092798.1-201ENST00000458542 409 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms