Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 FAM103A2P-201ENST00000444122 354 ntBASIC2.48□□□□□ -2.01
TRIM4Q9C037 AC093663.2-201ENST00000484625 313 ntBASIC2.48□□□□□ -2.01
TRIM4Q9C037 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
TRIM4Q9C037 AC114322.1-201ENST00000506771 926 ntBASIC2.48□□□□□ -2.01
TRIM4Q9C037 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.48□□□□□ -2.01
TRIM4Q9C037 HMGB1P47-201ENST00000511281 589 ntBASIC2.48□□□□□ -2.01
TRIM4Q9C037 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.48□□□□□ -2.01
TRIM4Q9C037 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.48□□□□□ -2.01
TRIM4Q9C037 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.48□□□□□ -2.01
TRIM4Q9C037 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.48□□□□□ -2.01
TRIM4Q9C037 AC007621.1-201ENST00000604544 437 ntBASIC2.48□□□□□ -2.01
TRIM4Q9C037 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.48□□□□□ -2.01
TRIM4Q9C037 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.48□□□□□ -2.01
TRIM4Q9C037 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
TRIM4Q9C037 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.48□□□□□ -2.01
TRIM4Q9C037 MIR203B-201ENST00000636080 86 ntBASIC2.48□□□□□ -2.01
TRIM4Q9C037 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
TRIM4Q9C037 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
TRIM4Q9C037 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
TRIM4Q9C037 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.47□□□□□ -2.01
TRIM4Q9C037 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TRIM4Q9C037 RNU6-152P-201ENST00000384037 107 ntBASIC2.47□□□□□ -2.01
TRIM4Q9C037 SNORA36C-201ENST00000384289 132 ntBASIC2.47□□□□□ -2.01
TRIM4Q9C037 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.47□□□□□ -2.01
TRIM4Q9C037 RNU4-26P-201ENST00000410270 107 ntBASIC2.47□□□□□ -2.01
TRIM4Q9C037 RN7SKP223-201ENST00000410582 62 ntBASIC2.47□□□□□ -2.01
TRIM4Q9C037 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC2.47□□□□□ -2.01
TRIM4Q9C037 AC011816.1-201ENST00000441346 546 ntBASIC2.47□□□□□ -2.01
TRIM4Q9C037 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.47□□□□□ -2.01
TRIM4Q9C037 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.47□□□□□ -2.01
TRIM4Q9C037 RPL21P99-201ENST00000480369 423 ntBASIC2.47□□□□□ -2.01
TRIM4Q9C037 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.47□□□□□ -2.01
TRIM4Q9C037 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.47□□□□□ -2.01
TRIM4Q9C037 AC109329.2-201ENST00000519658 482 ntBASIC2.47□□□□□ -2.01
TRIM4Q9C037 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.47□□□□□ -2.01
TRIM4Q9C037 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.47□□□□□ -2.01
TRIM4Q9C037 AC016727.1-205ENST00000605437 569 ntBASIC2.47□□□□□ -2.01
TRIM4Q9C037 VN1R9P-201ENST00000614184 867 ntBASIC2.47□□□□□ -2.01
TRIM4Q9C037 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.47□□□□□ -2.01
TRIM4Q9C037 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.46□□□□□ -2.02
TRIM4Q9C037 CUL1P1-201ENST00000509510 2425 ntBASIC2.46□□□□□ -2.02
TRIM4Q9C037 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
TRIM4Q9C037 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
TRIM4Q9C037 RNU6-253P-201ENST00000384730 105 ntBASIC2.46□□□□□ -2.02
TRIM4Q9C037 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
TRIM4Q9C037 AL606495.1-201ENST00000422100 813 ntBASIC2.46□□□□□ -2.02
TRIM4Q9C037 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.46□□□□□ -2.02
TRIM4Q9C037 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.46□□□□□ -2.02
TRIM4Q9C037 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.46□□□□□ -2.02
TRIM4Q9C037 PGBD4P3-201ENST00000440731 581 ntBASIC2.46□□□□□ -2.02
TRIM4Q9C037 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.46□□□□□ -2.02
TRIM4Q9C037 RNA5SP310-201ENST00000459084 116 ntBASIC2.46□□□□□ -2.02
TRIM4Q9C037 AC090096.1-201ENST00000489168 390 ntBASIC2.46□□□□□ -2.02
TRIM4Q9C037 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
TRIM4Q9C037 CKS1BP2-201ENST00000497342 240 ntBASIC2.46□□□□□ -2.02
TRIM4Q9C037 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.46□□□□□ -2.02
TRIM4Q9C037 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.46□□□□□ -2.02
TRIM4Q9C037 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.46□□□□□ -2.02
TRIM4Q9C037 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.46□□□□□ -2.02
TRIM4Q9C037 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.46□□□□□ -2.02
TRIM4Q9C037 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.46□□□□□ -2.02
TRIM4Q9C037 OR5AK3P-201ENST00000527486 1297 ntBASIC2.46□□□□□ -2.02
TRIM4Q9C037 RANP3-201ENST00000530970 276 ntBASIC2.46□□□□□ -2.02
TRIM4Q9C037 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.46□□□□□ -2.02
TRIM4Q9C037 AC106791.2-201ENST00000604680 391 ntBASIC2.46□□□□□ -2.02
TRIM4Q9C037 AC073111.2-201ENST00000605657 1075 ntBASIC2.46□□□□□ -2.02
TRIM4Q9C037 AC092650.2-201ENST00000619984 902 ntBASIC2.46□□□□□ -2.02
TRIM4Q9C037 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.46□□□□□ -2.02
TRIM4Q9C037 RNA5SP258-201ENST00000362750 119 ntBASIC2.45□□□□□ -2.02
TRIM4Q9C037 SNORA51.11-201ENST00000384442 131 ntBASIC2.45□□□□□ -2.02
TRIM4Q9C037 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.45□□□□□ -2.02
TRIM4Q9C037 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.45□□□□□ -2.02
TRIM4Q9C037 AL121871.1-201ENST00000443413 436 ntBASIC2.45□□□□□ -2.02
TRIM4Q9C037 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.45□□□□□ -2.02
TRIM4Q9C037 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.45□□□□□ -2.02
TRIM4Q9C037 RNF138P1-201ENST00000502765 546 ntBASIC2.45□□□□□ -2.02
TRIM4Q9C037 RN7SKP219-201ENST00000516825 296 ntBASIC2.45□□□□□ -2.02
TRIM4Q9C037 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.45□□□□□ -2.02
TRIM4Q9C037 MTCO1P47-201ENST00000523889 1271 ntBASIC2.45□□□□□ -2.02
TRIM4Q9C037 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.45□□□□□ -2.02
TRIM4Q9C037 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.45□□□□□ -2.02
TRIM4Q9C037 YWHAZP1-201ENST00000556286 722 ntBASIC2.45□□□□□ -2.02
TRIM4Q9C037 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.45□□□□□ -2.02
TRIM4Q9C037 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.45□□□□□ -2.02
TRIM4Q9C037 AC007938.3-201ENST00000604965 623 ntBASIC2.45□□□□□ -2.02
TRIM4Q9C037 AC112503.2-201ENST00000609005 552 ntBASIC2.45□□□□□ -2.02
TRIM4Q9C037 AC034102.8-201ENST00000615146 484 ntBASIC2.45□□□□□ -2.02
TRIM4Q9C037 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.45□□□□□ -2.02
TRIM4Q9C037 CTSLP2-204ENST00000629029 392 ntBASIC2.45□□□□□ -2.02
TRIM4Q9C037 AC026634.1-201ENST00000634369 198 ntBASIC2.45□□□□□ -2.02
TRIM4Q9C037 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.45□□□□□ -2.02
TRIM4Q9C037 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
TRIM4Q9C037 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
TRIM4Q9C037 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
TRIM4Q9C037 ZNF519P1-201ENST00000449011 1626 ntBASIC2.44□□□□□ -2.02
TRIM4Q9C037 Y_RNA.269-201ENST00000364685 89 ntBASIC2.44□□□□□ -2.02
TRIM4Q9C037 RNU1-100P-201ENST00000365255 165 ntBASIC2.44□□□□□ -2.02
TRIM4Q9C037 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
TRIM4Q9C037 MIR524-201ENST00000385242 87 ntBASIC2.44□□□□□ -2.02
TRIM4Q9C037 MTCO3P12-201ENST00000416718 547 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms