Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 LDHBP3-201ENST00000514909 822 ntBASIC2.72□□□□□ -1.97
SCAPERQ9BY12 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.72□□□□□ -1.97
SCAPERQ9BY12 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.72□□□□□ -1.97
SCAPERQ9BY12 BX248123.2-201ENST00000606318 124 ntBASIC2.72□□□□□ -1.97
SCAPERQ9BY12 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.72□□□□□ -1.97
SCAPERQ9BY12 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
SCAPERQ9BY12 PABPC1P9-201ENST00000426076 1612 ntBASIC2.72□□□□□ -1.97
SCAPERQ9BY12 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SCAPERQ9BY12 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.71□□□□□ -1.98
SCAPERQ9BY12 RFESDP1-201ENST00000422350 461 ntBASIC2.71□□□□□ -1.98
SCAPERQ9BY12 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SCAPERQ9BY12 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.71□□□□□ -1.98
SCAPERQ9BY12 AC092798.1-201ENST00000458542 409 ntBASIC2.71□□□□□ -1.98
SCAPERQ9BY12 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.71□□□□□ -1.98
SCAPERQ9BY12 FABP5P6-201ENST00000510588 409 ntBASIC2.71□□□□□ -1.98
SCAPERQ9BY12 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.71□□□□□ -1.98
SCAPERQ9BY12 VN1R84P-201ENST00000593697 235 ntBASIC2.71□□□□□ -1.98
SCAPERQ9BY12 AC090425.2-201ENST00000608818 501 ntBASIC2.71□□□□□ -1.98
SCAPERQ9BY12 MIR6895-201ENST00000613497 78 ntBASIC2.71□□□□□ -1.98
SCAPERQ9BY12 AL589994.2-201ENST00000621124 579 ntBASIC2.71□□□□□ -1.98
SCAPERQ9BY12 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SCAPERQ9BY12 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
SCAPERQ9BY12 RPL23AP39-201ENST00000415533 405 ntBASIC2.7□□□□□ -1.98
SCAPERQ9BY12 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.7□□□□□ -1.98
SCAPERQ9BY12 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.7□□□□□ -1.98
SCAPERQ9BY12 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.7□□□□□ -1.98
SCAPERQ9BY12 Z73417.1-201ENST00000447373 778 ntBASIC2.7□□□□□ -1.98
SCAPERQ9BY12 AL590664.1-201ENST00000448065 339 ntBASIC2.7□□□□□ -1.98
SCAPERQ9BY12 AC135721.1-201ENST00000497954 479 ntBASIC2.7□□□□□ -1.98
SCAPERQ9BY12 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC2.7□□□□□ -1.98
SCAPERQ9BY12 MIR4716-201ENST00000579628 84 ntBASIC2.7□□□□□ -1.98
SCAPERQ9BY12 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.7□□□□□ -1.98
SCAPERQ9BY12 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.7□□□□□ -1.98
SCAPERQ9BY12 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.7□□□□□ -1.98
SCAPERQ9BY12 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.69□□□□□ -1.98
SCAPERQ9BY12 AC090255.1-201ENST00000495779 349 ntBASIC2.69□□□□□ -1.98
SCAPERQ9BY12 SEM1P1-201ENST00000506694 209 ntBASIC2.69□□□□□ -1.98
SCAPERQ9BY12 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.69□□□□□ -1.98
SCAPERQ9BY12 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2.69□□□□□ -1.98
SCAPERQ9BY12 AC121758.2-201ENST00000553271 193 ntBASIC2.69□□□□□ -1.98
SCAPERQ9BY12 AC009318.3-201ENST00000616916 503 ntBASIC2.69□□□□□ -1.98
SCAPERQ9BY12 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
SCAPERQ9BY12 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SCAPERQ9BY12 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SCAPERQ9BY12 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.68□□□□□ -1.98
SCAPERQ9BY12 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SCAPERQ9BY12 RPL23AP47-201ENST00000408017 460 ntBASIC2.68□□□□□ -1.98
SCAPERQ9BY12 MIR1276-201ENST00000408707 83 ntBASIC2.68□□□□□ -1.98
SCAPERQ9BY12 RNU2-68P-201ENST00000410878 191 ntBASIC2.68□□□□□ -1.98
SCAPERQ9BY12 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.68□□□□□ -1.98
SCAPERQ9BY12 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.68□□□□□ -1.98
SCAPERQ9BY12 NDUFA5P4-201ENST00000436704 385 ntBASIC2.68□□□□□ -1.98
SCAPERQ9BY12 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.68□□□□□ -1.98
SCAPERQ9BY12 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC2.68□□□□□ -1.98
SCAPERQ9BY12 RNA5SP490-201ENST00000517141 136 ntBASIC2.68□□□□□ -1.98
SCAPERQ9BY12 RPS3AP23-202ENST00000574601 686 ntBASIC2.68□□□□□ -1.98
SCAPERQ9BY12 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
SCAPERQ9BY12 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
SCAPERQ9BY12 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SCAPERQ9BY12 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SCAPERQ9BY12 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SCAPERQ9BY12 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SCAPERQ9BY12 Y_RNA.122-201ENST00000363331 96 ntBASIC2.68□□□□□ -1.98
SCAPERQ9BY12 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
SCAPERQ9BY12 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SCAPERQ9BY12 AC022022.1-201ENST00000430304 178 ntBASIC2.68□□□□□ -1.98
SCAPERQ9BY12 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.68□□□□□ -1.98
SCAPERQ9BY12 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.68□□□□□ -1.98
SCAPERQ9BY12 IGHVIII-38-1-201ENST00000521454 282 ntBASIC2.68□□□□□ -1.98
SCAPERQ9BY12 uc_338.5-201ENST00000611839 155 ntBASIC2.68□□□□□ -1.98
SCAPERQ9BY12 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.68□□□□□ -1.98
SCAPERQ9BY12 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SCAPERQ9BY12 AC027514.1-201ENST00000588561 1603 ntBASIC2.67□□□□□ -1.98
SCAPERQ9BY12 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
SCAPERQ9BY12 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SCAPERQ9BY12 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
SCAPERQ9BY12 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
SCAPERQ9BY12 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.67□□□□□ -1.98
SCAPERQ9BY12 MTND4P1-201ENST00000457501 1466 ntBASIC2.67□□□□□ -1.98
SCAPERQ9BY12 RNU6-392P-201ENST00000364926 101 ntBASIC2.67□□□□□ -1.98
SCAPERQ9BY12 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.67□□□□□ -1.98
SCAPERQ9BY12 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.67□□□□□ -1.98
SCAPERQ9BY12 snoU13.18-201ENST00000459483 104 ntBASIC2.67□□□□□ -1.98
SCAPERQ9BY12 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.67□□□□□ -1.98
SCAPERQ9BY12 SMARCE1P4-201ENST00000523647 241 ntBASIC2.67□□□□□ -1.98
SCAPERQ9BY12 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC2.67□□□□□ -1.98
SCAPERQ9BY12 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.67□□□□□ -1.98
SCAPERQ9BY12 AL109809.4-201ENST00000603520 2185 ntBASIC2.66□□□□□ -1.98
SCAPERQ9BY12 Z98749.2-208ENST00000381646 500 ntBASIC2.66□□□□□ -1.98
SCAPERQ9BY12 AL513331.1-201ENST00000411908 397 ntBASIC2.66□□□□□ -1.98
SCAPERQ9BY12 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.66□□□□□ -1.98
SCAPERQ9BY12 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.66□□□□□ -1.98
SCAPERQ9BY12 USP9YP15-201ENST00000442391 422 ntBASIC2.66□□□□□ -1.98
SCAPERQ9BY12 UBBP3-201ENST00000445497 241 ntBASIC2.66□□□□□ -1.98
SCAPERQ9BY12 NDUFA5P6-201ENST00000542110 379 ntBASIC2.66□□□□□ -1.98
SCAPERQ9BY12 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.66□□□□□ -1.98
SCAPERQ9BY12 AC090751.1-201ENST00000566966 267 ntBASIC2.66□□□□□ -1.98
SCAPERQ9BY12 MIR4512-201ENST00000583257 77 ntBASIC2.66□□□□□ -1.98
SCAPERQ9BY12 AC018754.1-201ENST00000607486 925 ntBASIC2.66□□□□□ -1.98
SCAPERQ9BY12 AL512598.1-201ENST00000610158 273 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms