Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.68□□□□□ -1.98
CDX2Q99626 AC011611.5-201ENST00000552477 578 ntBASIC2.68□□□□□ -1.98
CDX2Q99626 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.68□□□□□ -1.98
CDX2Q99626 AC034268.2-201ENST00000571784 482 ntBASIC2.68□□□□□ -1.98
CDX2Q99626 BPTFP1-201ENST00000579209 492 ntBASIC2.68□□□□□ -1.98
CDX2Q99626 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.68□□□□□ -1.98
CDX2Q99626 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.68□□□□□ -1.98
CDX2Q99626 AL136370.1-201ENST00000608166 691 ntBASIC2.68□□□□□ -1.98
CDX2Q99626 AC112503.2-201ENST00000609005 552 ntBASIC2.68□□□□□ -1.98
CDX2Q99626 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.68□□□□□ -1.98
CDX2Q99626 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.68□□□□□ -1.98
CDX2Q99626 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.68□□□□□ -1.98
CDX2Q99626 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.67□□□□□ -1.98
CDX2Q99626 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CDX2Q99626 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.67□□□□□ -1.98
CDX2Q99626 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CDX2Q99626 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CDX2Q99626 MIR148B-201ENST00000362252 99 ntBASIC2.67□□□□□ -1.98
CDX2Q99626 RNU6-468P-201ENST00000384003 109 ntBASIC2.67□□□□□ -1.98
CDX2Q99626 AL359511.1-201ENST00000402970 211 ntBASIC2.67□□□□□ -1.98
CDX2Q99626 RNA5SP56-201ENST00000410277 118 ntBASIC2.67□□□□□ -1.98
CDX2Q99626 RN7SKP58-201ENST00000411010 305 ntBASIC2.67□□□□□ -1.98
CDX2Q99626 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.67□□□□□ -1.98
CDX2Q99626 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.67□□□□□ -1.98
CDX2Q99626 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
CDX2Q99626 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.67□□□□□ -1.98
CDX2Q99626 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CDX2Q99626 RPS26P21-201ENST00000475397 348 ntBASIC2.67□□□□□ -1.98
CDX2Q99626 MTCO3P35-201ENST00000485582 781 ntBASIC2.67□□□□□ -1.98
CDX2Q99626 RNU6-467P-201ENST00000517027 110 ntBASIC2.67□□□□□ -1.98
CDX2Q99626 RNA5SP380-201ENST00000517190 98 ntBASIC2.67□□□□□ -1.98
CDX2Q99626 AP001207.1-201ENST00000524051 481 ntBASIC2.67□□□□□ -1.98
CDX2Q99626 AC239860.2-201ENST00000525886 270 ntBASIC2.67□□□□□ -1.98
CDX2Q99626 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.67□□□□□ -1.98
CDX2Q99626 AC092470.1-201ENST00000546187 132 ntBASIC2.67□□□□□ -1.98
CDX2Q99626 AL136520.1-202ENST00000555494 763 ntBASIC2.67□□□□□ -1.98
CDX2Q99626 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.67□□□□□ -1.98
CDX2Q99626 AC090695.1-201ENST00000561269 1222 ntBASIC2.67□□□□□ -1.98
CDX2Q99626 MIR4789-201ENST00000577469 82 ntBASIC2.67□□□□□ -1.98
CDX2Q99626 MIR4666A-201ENST00000580160 79 ntBASIC2.67□□□□□ -1.98
CDX2Q99626 AC013468.1-201ENST00000608680 598 ntBASIC2.67□□□□□ -1.98
CDX2Q99626 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.67□□□□□ -1.98
CDX2Q99626 BX649567.1-201ENST00000642071 1134 ntBASIC2.67□□□□□ -1.98
CDX2Q99626 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CDX2Q99626 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CDX2Q99626 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.67□□□□□ -1.98
CDX2Q99626 AC103988.1-201ENST00000566382 2177 ntBASIC2.67□□□□□ -1.98
CDX2Q99626 AP001350.1-201ENST00000601906 1524 ntBASIC2.67□□□□□ -1.98
CDX2Q99626 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.66□□□□□ -1.98
CDX2Q99626 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CDX2Q99626 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.66□□□□□ -1.98
CDX2Q99626 MIR525-201ENST00000384978 85 ntBASIC2.66□□□□□ -1.98
CDX2Q99626 AL024474.1-201ENST00000404655 591 ntBASIC2.66□□□□□ -1.98
CDX2Q99626 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.66□□□□□ -1.98
CDX2Q99626 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.66□□□□□ -1.98
CDX2Q99626 RPL17P49-201ENST00000443728 411 ntBASIC2.66□□□□□ -1.98
CDX2Q99626 SEPT14P24-201ENST00000447236 180 ntBASIC2.66□□□□□ -1.98
CDX2Q99626 Z99714.1-201ENST00000450463 807 ntBASIC2.66□□□□□ -1.98
CDX2Q99626 AC104073.1-201ENST00000451988 151 ntBASIC2.66□□□□□ -1.98
CDX2Q99626 MTCO1P42-201ENST00000457379 726 ntBASIC2.66□□□□□ -1.98
CDX2Q99626 NAP1L1P3-201ENST00000462291 880 ntBASIC2.66□□□□□ -1.98
CDX2Q99626 KCTD9P5-201ENST00000504141 1170 ntBASIC2.66□□□□□ -1.98
CDX2Q99626 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.66□□□□□ -1.98
CDX2Q99626 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.66□□□□□ -1.98
CDX2Q99626 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CDX2Q99626 RNU6-334P-201ENST00000517072 102 ntBASIC2.66□□□□□ -1.98
CDX2Q99626 RNU6-711P-201ENST00000517255 106 ntBASIC2.66□□□□□ -1.98
CDX2Q99626 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.66□□□□□ -1.98
CDX2Q99626 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.66□□□□□ -1.98
CDX2Q99626 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.66□□□□□ -1.98
CDX2Q99626 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.66□□□□□ -1.98
CDX2Q99626 MIR4635-201ENST00000583759 79 ntBASIC2.66□□□□□ -1.98
CDX2Q99626 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.66□□□□□ -1.98
CDX2Q99626 HSPE1P14-201ENST00000605812 302 ntBASIC2.66□□□□□ -1.98
CDX2Q99626 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CDX2Q99626 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.66□□□□□ -1.98
CDX2Q99626 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.66□□□□□ -1.98
CDX2Q99626 MTND5P6-201ENST00000422338 1798 ntBASIC2.66□□□□□ -1.98
CDX2Q99626 AC011460.1-201ENST00000636268 1834 ntBASIC2.65□□□□□ -1.98
CDX2Q99626 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.98
CDX2Q99626 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.98
CDX2Q99626 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.65□□□□□ -1.98
CDX2Q99626 RNU1-17P-201ENST00000363022 152 ntBASIC2.65□□□□□ -1.99
CDX2Q99626 U3.11-201ENST00000364476 212 ntBASIC2.65□□□□□ -1.99
CDX2Q99626 RNU6-730P-201ENST00000383954 104 ntBASIC2.65□□□□□ -1.99
CDX2Q99626 RNU6-629P-201ENST00000384061 103 ntBASIC2.65□□□□□ -1.99
CDX2Q99626 RNU6-339P-201ENST00000384310 107 ntBASIC2.65□□□□□ -1.99
CDX2Q99626 MIR499A-201ENST00000384903 122 ntBASIC2.65□□□□□ -1.99
CDX2Q99626 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CDX2Q99626 GSTA9P-201ENST00000406231 611 ntBASIC2.65□□□□□ -1.99
CDX2Q99626 AL583834.1-201ENST00000406943 343 ntBASIC2.65□□□□□ -1.99
CDX2Q99626 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.65□□□□□ -1.99
CDX2Q99626 YPEL5P1-201ENST00000419731 367 ntBASIC2.65□□□□□ -1.99
CDX2Q99626 AC246680.2-201ENST00000422106 389 ntBASIC2.65□□□□□ -1.99
CDX2Q99626 DEFB130D-201ENST00000426866 237 ntBASIC2.65□□□□□ -1.99
CDX2Q99626 RPL31P54-201ENST00000429803 370 ntBASIC2.65□□□□□ -1.99
CDX2Q99626 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.65□□□□□ -1.99
CDX2Q99626 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.65□□□□□ -1.99
CDX2Q99626 SYPL1P1-201ENST00000473622 768 ntBASIC2.65□□□□□ -1.99
CDX2Q99626 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms