Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CSMD1Q96PZ7 MTND1P18-201ENST00000448191 573 ntBASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 EIF2S2P4-201ENST00000461070 984 ntBASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 AC025033.1-201ENST00000463883 194 ntBASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 TBCAP3-201ENST00000512475 312 ntBASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 AC103810.8-201ENST00000607347 118 ntBASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 TEX21P-201ENST00000447107 1476 ntBASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 Y_RNA.115-201ENST00000363272 98 ntBASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 EIF1AXP1-201ENST00000419267 435 ntBASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 AC080078.3-201ENST00000605407 463 ntBASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 AC024560.3-201ENST00000608482 349 ntBASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 Y_RNA.294-201ENST00000364916 102 ntBASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 MIR520E-201ENST00000384867 87 ntBASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 MTND4P13-201ENST00000402078 1023 ntBASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 AL022400.1-201ENST00000423946 935 ntBASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 AL365400.1-201ENST00000431854 640 ntBASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 AL138787.1-202ENST00000437804 898 ntBASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 XKRY2-201ENST00000442362 1093 ntBASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 AMD1P1-201ENST00000457220 922 ntBASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 AC092989.1-201ENST00000481235 277 ntBASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 FAM106DP-201ENST00000586416 501 ntBASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.44□□□□□ -2.18
CSMD1Q96PZ7 AL590664.1-201ENST00000448065 339 ntBASIC1.43□□□□□ -2.18
CSMD1Q96PZ7 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.43□□□□□ -2.18
CSMD1Q96PZ7 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.43□□□□□ -2.18
CSMD1Q96PZ7 DNAJC8P1-201ENST00000554535 372 ntBASIC1.43□□□□□ -2.18
CSMD1Q96PZ7 AC121761.2-201ENST00000617300 689 ntBASIC1.43□□□□□ -2.18
CSMD1Q96PZ7 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.43□□□□□ -2.18
CSMD1Q96PZ7 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CSMD1Q96PZ7 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
CSMD1Q96PZ7 Z98749.2-208ENST00000381646 500 ntBASIC1.43□□□□□ -2.18
CSMD1Q96PZ7 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
CSMD1Q96PZ7 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC1.43□□□□□ -2.18
CSMD1Q96PZ7 VN1R108P-201ENST00000431580 830 ntBASIC1.43□□□□□ -2.18
CSMD1Q96PZ7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC1.43□□□□□ -2.18
CSMD1Q96PZ7 AP000907.2-201ENST00000530827 353 ntBASIC1.43□□□□□ -2.18
CSMD1Q96PZ7 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.43□□□□□ -2.18
CSMD1Q96PZ7 AC103810.1-201ENST00000579873 453 ntBASIC1.43□□□□□ -2.18
CSMD1Q96PZ7 MFF-206ENST00000392059 1710 ntTSL 5 BASIC1.43□□□□□ -2.18
CSMD1Q96PZ7 AL136133.1-201ENST00000413694 376 ntBASIC1.43□□□□□ -2.18
CSMD1Q96PZ7 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.43□□□□□ -2.18
CSMD1Q96PZ7 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.43□□□□□ -2.18
CSMD1Q96PZ7 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC1.43□□□□□ -2.18
CSMD1Q96PZ7 HMGB1P47-201ENST00000511281 589 ntBASIC1.43□□□□□ -2.18
CSMD1Q96PZ7 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CSMD1Q96PZ7 RNU6-826P-201ENST00000516827 104 ntBASIC1.43□□□□□ -2.18
CSMD1Q96PZ7 AL512283.1-201ENST00000606756 1384 ntBASIC1.43□□□□□ -2.18
CSMD1Q96PZ7 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 AL583843.1-201ENST00000456070 346 ntBASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 RNA5SP121-201ENST00000516537 101 ntBASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 AC087241.2-201ENST00000535801 324 ntBASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 MIR3670-2-201ENST00000582974 65 ntBASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 MIR3670-1-201ENST00000584160 65 ntBASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 MIR3670-3-201ENST00000584855 65 ntBASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 MIR3670-4-201ENST00000612260 65 ntBASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 AL157834.3-201ENST00000615543 103 ntBASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 AL021397.1-201ENST00000451806 248 ntBASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 AC034222.1-201ENST00000494052 532 ntBASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 AC114801.2-201ENST00000503825 781 ntBASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 AL139286.1-201ENST00000604465 483 ntBASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 U73479.1-201ENST00000618062 168 ntBASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 RNU1-22P-201ENST00000363334 158 ntBASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 RNA5SP27-201ENST00000363839 119 ntBASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 AC027673.1-201ENST00000456245 405 ntBASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 RNU6-1223P-201ENST00000517124 104 ntBASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 AC006254.3-201ENST00000603353 884 ntBASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 AC092954.1-201ENST00000609121 445 ntBASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 MIR6086-201ENST00000638065 55 ntBASIC1.42□□□□□ -2.18
CSMD1Q96PZ7 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CSMD1Q96PZ7 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms