Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC138Q96M89 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CCDC138Q96M89 RNU4-1-201ENST00000363925 141 ntBASIC4.11□□□□□ -1.75
CCDC138Q96M89 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC138Q96M89 RNU6-1042P-201ENST00000384204 107 ntBASIC4.11□□□□□ -1.75
CCDC138Q96M89 SNORD116-4-201ENST00000384733 96 ntBASIC4.11□□□□□ -1.75
CCDC138Q96M89 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCDC138Q96M89 RPL7P60-201ENST00000397636 735 ntBASIC4.11□□□□□ -1.75
CCDC138Q96M89 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC138Q96M89 MTCO3P41-201ENST00000414801 328 ntBASIC4.11□□□□□ -1.75
CCDC138Q96M89 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC138Q96M89 AC018630.2-202ENST00000422992 927 ntBASIC4.11□□□□□ -1.75
CCDC138Q96M89 RPL7L1P10-201ENST00000427790 463 ntBASIC4.11□□□□□ -1.75
CCDC138Q96M89 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC138Q96M89 ARPC3P1-201ENST00000437218 533 ntBASIC4.11□□□□□ -1.75
CCDC138Q96M89 TXNP1-201ENST00000441872 371 ntBASIC4.11□□□□□ -1.75
CCDC138Q96M89 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC138Q96M89 AC016696.1-201ENST00000446949 318 ntBASIC4.11□□□□□ -1.75
CCDC138Q96M89 AL672167.3-201ENST00000465951 960 ntBASIC4.11□□□□□ -1.75
CCDC138Q96M89 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC138Q96M89 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC138Q96M89 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC138Q96M89 SNORA70.16-201ENST00000516390 95 ntBASIC4.11□□□□□ -1.75
CCDC138Q96M89 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.11□□□□□ -1.75
CCDC138Q96M89 RNA5SP337-201ENST00000517007 109 ntBASIC4.11□□□□□ -1.75
CCDC138Q96M89 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC138Q96M89 AC011979.2-201ENST00000527568 352 ntBASIC4.11□□□□□ -1.75
CCDC138Q96M89 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.11□□□□□ -1.75
CCDC138Q96M89 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC138Q96M89 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC138Q96M89 AC063950.1-201ENST00000552036 308 ntBASIC4.11□□□□□ -1.75
CCDC138Q96M89 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC138Q96M89 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC138Q96M89 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC138Q96M89 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC138Q96M89 AC007599.1-201ENST00000568688 1174 ntBASIC4.11□□□□□ -1.75
CCDC138Q96M89 RPL23AP84-201ENST00000571193 464 ntBASIC4.11□□□□□ -1.75
CCDC138Q96M89 MIR4284-201ENST00000578924 81 ntBASIC4.11□□□□□ -1.75
CCDC138Q96M89 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC138Q96M89 AC023043.4-201ENST00000612081 449 ntBASIC4.11□□□□□ -1.75
CCDC138Q96M89 MLECP1-201ENST00000615893 709 ntBASIC4.11□□□□□ -1.75
CCDC138Q96M89 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCDC138Q96M89 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC138Q96M89 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC138Q96M89 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CCDC138Q96M89 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC138Q96M89 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC138Q96M89 AP001486.2-201ENST00000561652 5113 ntBASIC4.1□□□□□ -1.75
CCDC138Q96M89 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC138Q96M89 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC138Q96M89 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CCDC138Q96M89 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC138Q96M89 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC138Q96M89 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC138Q96M89 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC138Q96M89 RNU6-1284P-201ENST00000363701 100 ntBASIC4.1□□□□□ -1.75
CCDC138Q96M89 RNA5SP366-201ENST00000365454 123 ntBASIC4.1□□□□□ -1.75
CCDC138Q96M89 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC138Q96M89 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC138Q96M89 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC138Q96M89 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC138Q96M89 RNU2-16P-201ENST00000410712 136 ntBASIC4.1□□□□□ -1.75
CCDC138Q96M89 AC127391.1-201ENST00000411737 98 ntBASIC4.1□□□□□ -1.75
CCDC138Q96M89 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC138Q96M89 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC138Q96M89 C4BPAP2-201ENST00000428434 478 ntBASIC4.1□□□□□ -1.75
CCDC138Q96M89 RPL23AP46-201ENST00000438548 490 ntBASIC4.1□□□□□ -1.75
CCDC138Q96M89 AL662791.1-201ENST00000441992 928 ntBASIC4.1□□□□□ -1.75
CCDC138Q96M89 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC138Q96M89 RAD23BP3-201ENST00000454157 1152 ntBASIC4.1□□□□□ -1.75
CCDC138Q96M89 ANP32BP2-201ENST00000454525 545 ntBASIC4.1□□□□□ -1.75
CCDC138Q96M89 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC138Q96M89 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC138Q96M89 AL049714.1-201ENST00000466686 347 ntBASIC4.1□□□□□ -1.75
CCDC138Q96M89 AC010631.1-201ENST00000474150 156 ntBASIC4.1□□□□□ -1.75
CCDC138Q96M89 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC138Q96M89 RNU6-405P-201ENST00000516637 110 ntBASIC4.1□□□□□ -1.75
CCDC138Q96M89 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC138Q96M89 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC138Q96M89 CYCSP29-201ENST00000533731 318 ntBASIC4.1□□□□□ -1.75
CCDC138Q96M89 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC138Q96M89 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC138Q96M89 TVP23BP1-201ENST00000557500 617 ntBASIC4.1□□□□□ -1.75
CCDC138Q96M89 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC138Q96M89 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC138Q96M89 AGGF1P4-201ENST00000568249 801 ntBASIC4.1□□□□□ -1.75
CCDC138Q96M89 MIR4293-201ENST00000584305 78 ntBASIC4.1□□□□□ -1.75
CCDC138Q96M89 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC138Q96M89 ARF4P1-201ENST00000605447 541 ntBASIC4.1□□□□□ -1.75
CCDC138Q96M89 AL133173.2-201ENST00000614270 90 ntBASIC4.1□□□□□ -1.75
CCDC138Q96M89 AC004696.1-201ENST00000614345 607 ntBASIC4.1□□□□□ -1.75
CCDC138Q96M89 AC013476.2-201ENST00000614456 459 ntBASIC4.1□□□□□ -1.75
CCDC138Q96M89 AC010133.1-201ENST00000615809 842 ntBASIC4.1□□□□□ -1.75
CCDC138Q96M89 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CCDC138Q96M89 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC138Q96M89 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC138Q96M89 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC138Q96M89 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC138Q96M89 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CCDC138Q96M89 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms