Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AC006349.1-201ENST00000555526 235 ntBASIC5.76□□□□□ -1.49
CALR3Q96L12 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CALR3Q96L12 BNIP3P16-201ENST00000589779 534 ntBASIC5.76□□□□□ -1.49
CALR3Q96L12 AP005431.1-201ENST00000618479 319 ntBASIC5.76□□□□□ -1.49
CALR3Q96L12 AP001642.1-201ENST00000624727 2117 ntBASIC5.76□□□□□ -1.49
CALR3Q96L12 AL512643.1-201ENST00000635735 524 ntBASIC5.76□□□□□ -1.49
CALR3Q96L12 Z99571.1-201ENST00000636677 394 ntBASIC5.76□□□□□ -1.49
CALR3Q96L12 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.76□□□□□ -1.49
CALR3Q96L12 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.76□□□□□ -1.49
CALR3Q96L12 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.76□□□□□ -1.49
CALR3Q96L12 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.76□□□□□ -1.49
CALR3Q96L12 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CALR3Q96L12 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CALR3Q96L12 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CALR3Q96L12 EOGT-210ENST00000615922 1931 ntBASIC5.76□□□□□ -1.49
CALR3Q96L12 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.76□□□□□ -1.49
CALR3Q96L12 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CALR3Q96L12 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.76□□□□□ -1.49
CALR3Q96L12 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CALR3Q96L12 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.75□□□□□ -1.49
CALR3Q96L12 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.75□□□□□ -1.49
CALR3Q96L12 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CALR3Q96L12 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CALR3Q96L12 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CALR3Q96L12 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CALR3Q96L12 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.75□□□□□ -1.49
CALR3Q96L12 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CALR3Q96L12 MIR514A1-201ENST00000385133 98 ntBASIC5.75□□□□□ -1.49
CALR3Q96L12 RNU6-985P-201ENST00000410182 104 ntBASIC5.75□□□□□ -1.49
CALR3Q96L12 RNU6-607P-201ENST00000411283 108 ntBASIC5.75□□□□□ -1.49
CALR3Q96L12 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CALR3Q96L12 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.75□□□□□ -1.49
CALR3Q96L12 USMG5P1-201ENST00000425964 177 ntBASIC5.75□□□□□ -1.49
CALR3Q96L12 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.75□□□□□ -1.49
CALR3Q96L12 AL592045.1-201ENST00000429867 352 ntBASIC5.75□□□□□ -1.49
CALR3Q96L12 USP9YP30-201ENST00000430729 455 ntBASIC5.75□□□□□ -1.49
CALR3Q96L12 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.75□□□□□ -1.49
CALR3Q96L12 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC5.75□□□□□ -1.49
CALR3Q96L12 RPS23P6-201ENST00000466136 431 ntBASIC5.75□□□□□ -1.49
CALR3Q96L12 AC103987.1-201ENST00000473394 348 ntBASIC5.75□□□□□ -1.49
CALR3Q96L12 AC008716.1-201ENST00000511084 513 ntBASIC5.75□□□□□ -1.49
CALR3Q96L12 Y_RNA.661-201ENST00000516003 99 ntBASIC5.75□□□□□ -1.49
CALR3Q96L12 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CALR3Q96L12 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.75□□□□□ -1.49
CALR3Q96L12 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CALR3Q96L12 AC022884.2-201ENST00000578535 580 ntBASIC5.75□□□□□ -1.49
CALR3Q96L12 LRRC37A5P-203ENST00000580181 585 ntBASIC5.75□□□□□ -1.49
CALR3Q96L12 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.75□□□□□ -1.49
CALR3Q96L12 AC011494.1-201ENST00000596454 237 ntBASIC5.75□□□□□ -1.49
CALR3Q96L12 NUTF2P8-201ENST00000604593 363 ntBASIC5.75□□□□□ -1.49
CALR3Q96L12 RNU6-85P-201ENST00000605989 107 ntBASIC5.75□□□□□ -1.49
CALR3Q96L12 Z98200.1-201ENST00000607298 470 ntBASIC5.75□□□□□ -1.49
CALR3Q96L12 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CALR3Q96L12 AL158196.1-201ENST00000616786 434 ntBASIC5.75□□□□□ -1.49
CALR3Q96L12 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.75□□□□□ -1.49
CALR3Q96L12 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.75□□□□□ -1.49
CALR3Q96L12 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CALR3Q96L12 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.75□□□□□ -1.49
CALR3Q96L12 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CALR3Q96L12 MTND5P1-201ENST00000445440 1375 ntBASIC5.75□□□□□ -1.49
CALR3Q96L12 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CALR3Q96L12 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.75□□□□□ -1.49
CALR3Q96L12 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5.75□□□□□ -1.49
CALR3Q96L12 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CALR3Q96L12 OR4G2P-202ENST00000641004 1759 ntBASIC5.75□□□□□ -1.49
CALR3Q96L12 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.75□□□□□ -1.49
CALR3Q96L12 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CALR3Q96L12 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.75□□□□□ -1.49
CALR3Q96L12 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
CALR3Q96L12 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.75□□□□□ -1.49
CALR3Q96L12 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CALR3Q96L12 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.74□□□□□ -1.49
CALR3Q96L12 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CALR3Q96L12 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.74□□□□□ -1.49
CALR3Q96L12 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CALR3Q96L12 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CALR3Q96L12 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
CALR3Q96L12 RNU6-490P-201ENST00000362985 107 ntBASIC5.74□□□□□ -1.49
CALR3Q96L12 RNU6-1329P-201ENST00000365664 107 ntBASIC5.74□□□□□ -1.49
CALR3Q96L12 U3.35-201ENST00000408405 208 ntBASIC5.74□□□□□ -1.49
CALR3Q96L12 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.74□□□□□ -1.49
CALR3Q96L12 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.74□□□□□ -1.49
CALR3Q96L12 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.74□□□□□ -1.49
CALR3Q96L12 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC5.74□□□□□ -1.49
CALR3Q96L12 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.74□□□□□ -1.49
CALR3Q96L12 EI24P4-201ENST00000423683 1078 ntBASIC5.74□□□□□ -1.49
CALR3Q96L12 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CALR3Q96L12 OR6D1P-201ENST00000436165 939 ntBASIC5.74□□□□□ -1.49
CALR3Q96L12 NOTCH2P1-201ENST00000443481 624 ntBASIC5.74□□□□□ -1.49
CALR3Q96L12 KNOP1P3-201ENST00000446933 426 ntBASIC5.74□□□□□ -1.49
CALR3Q96L12 BTF3P15-201ENST00000455606 336 ntBASIC5.74□□□□□ -1.49
CALR3Q96L12 AC091180.1-201ENST00000462104 372 ntBASIC5.74□□□□□ -1.49
CALR3Q96L12 AC010285.1-201ENST00000470580 392 ntBASIC5.74□□□□□ -1.49
CALR3Q96L12 SUMO2P6-201ENST00000505273 288 ntBASIC5.74□□□□□ -1.49
CALR3Q96L12 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC5.74□□□□□ -1.49
CALR3Q96L12 RNU6-307P-201ENST00000516743 106 ntBASIC5.74□□□□□ -1.49
CALR3Q96L12 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.74□□□□□ -1.49
CALR3Q96L12 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.74□□□□□ -1.49
CALR3Q96L12 AL117187.1-201ENST00000555482 181 ntBASIC5.74□□□□□ -1.49
CALR3Q96L12 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms