Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.38□□□□□ -1.87
VMP1Q96GC9 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.38□□□□□ -1.87
VMP1Q96GC9 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.38□□□□□ -1.87
VMP1Q96GC9 NBEAP1-201ENST00000554452 979 ntBASIC3.38□□□□□ -1.87
VMP1Q96GC9 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.38□□□□□ -1.87
VMP1Q96GC9 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.38□□□□□ -1.87
VMP1Q96GC9 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.38□□□□□ -1.87
VMP1Q96GC9 AC006116.10-201ENST00000591836 581 ntBASIC3.38□□□□□ -1.87
VMP1Q96GC9 AC090186.1-201ENST00000605991 572 ntBASIC3.38□□□□□ -1.87
VMP1Q96GC9 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.38□□□□□ -1.87
VMP1Q96GC9 AC107294.3-201ENST00000609211 526 ntBASIC3.38□□□□□ -1.87
VMP1Q96GC9 AL109620.1-201ENST00000618738 1197 ntBASIC3.38□□□□□ -1.87
VMP1Q96GC9 AC022306.3-201ENST00000619930 550 ntBASIC3.38□□□□□ -1.87
VMP1Q96GC9 AL732618.1-201ENST00000623251 301 ntBASIC3.38□□□□□ -1.87
VMP1Q96GC9 AC073308.1-201ENST00000623696 305 ntBASIC3.38□□□□□ -1.87
VMP1Q96GC9 AC079597.1-201ENST00000624306 508 ntBASIC3.38□□□□□ -1.87
VMP1Q96GC9 AC110079.1-202ENST00000635213 138 ntBASIC3.38□□□□□ -1.87
VMP1Q96GC9 OR8B1P-202ENST00000641132 1178 ntBASIC3.38□□□□□ -1.87
VMP1Q96GC9 AC119674.1-207ENST00000641355 633 ntBASIC3.38□□□□□ -1.87
VMP1Q96GC9 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.38□□□□□ -1.87
VMP1Q96GC9 AC007785.2-201ENST00000598627 1916 ntBASIC3.38□□□□□ -1.87
VMP1Q96GC9 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VMP1Q96GC9 AC092447.10-201ENST00000620607 1652 ntBASIC3.37□□□□□ -1.87
VMP1Q96GC9 DDX10P1-201ENST00000448545 1933 ntBASIC3.37□□□□□ -1.87
VMP1Q96GC9 RNU6-744P-201ENST00000365557 107 ntBASIC3.37□□□□□ -1.87
VMP1Q96GC9 RNU6-1316P-201ENST00000384242 108 ntBASIC3.37□□□□□ -1.87
VMP1Q96GC9 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VMP1Q96GC9 RNU6-516P-201ENST00000411381 104 ntBASIC3.37□□□□□ -1.87
VMP1Q96GC9 MTND1P21-201ENST00000412991 285 ntBASIC3.37□□□□□ -1.87
VMP1Q96GC9 NDUFB4P5-201ENST00000415445 361 ntBASIC3.37□□□□□ -1.87
VMP1Q96GC9 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.37□□□□□ -1.87
VMP1Q96GC9 AL390023.1-201ENST00000428836 262 ntBASIC3.37□□□□□ -1.87
VMP1Q96GC9 AC091286.1-201ENST00000431233 461 ntBASIC3.37□□□□□ -1.87
VMP1Q96GC9 HSPD1P21-201ENST00000436541 245 ntBASIC3.37□□□□□ -1.87
VMP1Q96GC9 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.37□□□□□ -1.87
VMP1Q96GC9 CYCSP35-201ENST00000451978 304 ntBASIC3.37□□□□□ -1.87
VMP1Q96GC9 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.37□□□□□ -1.87
VMP1Q96GC9 MTND4LP3-201ENST00000468320 276 ntBASIC3.37□□□□□ -1.87
VMP1Q96GC9 AC134050.1-201ENST00000495088 933 ntBASIC3.37□□□□□ -1.87
VMP1Q96GC9 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.37□□□□□ -1.87
VMP1Q96GC9 AC010374.2-201ENST00000512933 535 ntBASIC3.37□□□□□ -1.87
VMP1Q96GC9 MTATP6P9-201ENST00000515039 680 ntBASIC3.37□□□□□ -1.87
VMP1Q96GC9 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.37□□□□□ -1.87
VMP1Q96GC9 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VMP1Q96GC9 AL355836.1-201ENST00000555951 870 ntBASIC3.37□□□□□ -1.87
VMP1Q96GC9 AL157394.1-201ENST00000562983 1224 ntBASIC3.37□□□□□ -1.87
VMP1Q96GC9 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.37□□□□□ -1.87
VMP1Q96GC9 AC091057.3-201ENST00000602684 733 ntBASIC3.37□□□□□ -1.87
VMP1Q96GC9 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.37□□□□□ -1.87
VMP1Q96GC9 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.37□□□□□ -1.87
VMP1Q96GC9 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.37□□□□□ -1.87
VMP1Q96GC9 AC004852.3-201ENST00000614131 326 ntBASIC3.37□□□□□ -1.87
VMP1Q96GC9 AC013476.2-201ENST00000614456 459 ntBASIC3.37□□□□□ -1.87
VMP1Q96GC9 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.37□□□□□ -1.87
VMP1Q96GC9 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.37□□□□□ -1.87
VMP1Q96GC9 AC009093.8-201ENST00000641769 292 ntBASIC3.37□□□□□ -1.87
VMP1Q96GC9 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
VMP1Q96GC9 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
VMP1Q96GC9 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.36□□□□□ -1.87
VMP1Q96GC9 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VMP1Q96GC9 SNORD9-201ENST00000362566 104 ntBASIC3.36□□□□□ -1.87
VMP1Q96GC9 RNU4-92P-201ENST00000363783 136 ntBASIC3.36□□□□□ -1.87
VMP1Q96GC9 SNORA23-201ENST00000365128 182 ntBASIC3.36□□□□□ -1.87
VMP1Q96GC9 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VMP1Q96GC9 MIR670-201ENST00000390142 98 ntBASIC3.36□□□□□ -1.87
VMP1Q96GC9 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VMP1Q96GC9 RPS29P4-201ENST00000414733 161 ntBASIC3.36□□□□□ -1.87
VMP1Q96GC9 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.36□□□□□ -1.87
VMP1Q96GC9 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.36□□□□□ -1.87
VMP1Q96GC9 USP9YP24-201ENST00000434374 697 ntBASIC3.36□□□□□ -1.87
VMP1Q96GC9 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.36□□□□□ -1.87
VMP1Q96GC9 AC108734.1-201ENST00000439549 399 ntBASIC3.36□□□□□ -1.87
VMP1Q96GC9 USP9YP17-201ENST00000444617 696 ntBASIC3.36□□□□□ -1.87
VMP1Q96GC9 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.36□□□□□ -1.87
VMP1Q96GC9 Z96811.1-201ENST00000445880 108 ntBASIC3.36□□□□□ -1.87
VMP1Q96GC9 EEF1E1P1-201ENST00000446998 430 ntBASIC3.36□□□□□ -1.87
VMP1Q96GC9 AC006499.5-201ENST00000505037 514 ntBASIC3.36□□□□□ -1.87
VMP1Q96GC9 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.36□□□□□ -1.87
VMP1Q96GC9 AC009901.1-201ENST00000506703 541 ntBASIC3.36□□□□□ -1.87
VMP1Q96GC9 AC021146.8-201ENST00000507455 733 ntBASIC3.36□□□□□ -1.87
VMP1Q96GC9 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.36□□□□□ -1.87
VMP1Q96GC9 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.36□□□□□ -1.87
VMP1Q96GC9 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.36□□□□□ -1.87
VMP1Q96GC9 AP002748.2-201ENST00000528671 348 ntBASIC3.36□□□□□ -1.87
VMP1Q96GC9 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
VMP1Q96GC9 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.36□□□□□ -1.87
VMP1Q96GC9 AC023161.2-201ENST00000551218 780 ntBASIC3.36□□□□□ -1.87
VMP1Q96GC9 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.36□□□□□ -1.87
VMP1Q96GC9 AC022662.1-201ENST00000580252 331 ntBASIC3.36□□□□□ -1.87
VMP1Q96GC9 MIR4506-201ENST00000584693 77 ntBASIC3.36□□□□□ -1.87
VMP1Q96GC9 AC008739.2-201ENST00000597006 317 ntBASIC3.36□□□□□ -1.87
VMP1Q96GC9 AC019159.1-201ENST00000605094 187 ntBASIC3.36□□□□□ -1.87
VMP1Q96GC9 MIR92B-201ENST00000607575 96 ntBASIC3.36□□□□□ -1.87
VMP1Q96GC9 AL391834.2-201ENST00000609982 546 ntBASIC3.36□□□□□ -1.87
VMP1Q96GC9 MIR7851-201ENST00000610611 160 ntBASIC3.36□□□□□ -1.87
VMP1Q96GC9 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VMP1Q96GC9 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.36□□□□□ -1.87
VMP1Q96GC9 AC006386.1-201ENST00000619436 415 ntBASIC3.36□□□□□ -1.87
VMP1Q96GC9 AC002064.3-201ENST00000623448 346 ntBASIC3.36□□□□□ -1.87
VMP1Q96GC9 AC068880.5-201ENST00000624331 290 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms