Protein–RNA interactions for Protein: Q96E29

MTERF3, Transcription termination factor 3, mitochondrial, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTERF3Q96E29 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
MTERF3Q96E29 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
MTERF3Q96E29 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
MTERF3Q96E29 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
MTERF3Q96E29 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
MTERF3Q96E29 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
MTERF3Q96E29 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
MTERF3Q96E29 AC068647.1-201ENST00000489539 2265 ntBASIC3.41□□□□□ -1.86
MTERF3Q96E29 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
MTERF3Q96E29 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
MTERF3Q96E29 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
MTERF3Q96E29 AC004925.1-201ENST00000624256 2706 ntBASIC3.41□□□□□ -1.86
MTERF3Q96E29 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
MTERF3Q96E29 MIR607-201ENST00000385241 96 ntBASIC3.41□□□□□ -1.86
MTERF3Q96E29 U3.20-201ENST00000390909 217 ntBASIC3.41□□□□□ -1.86
MTERF3Q96E29 RPS20P2-201ENST00000402520 389 ntBASIC3.41□□□□□ -1.86
MTERF3Q96E29 AC078974.1-201ENST00000411597 223 ntBASIC3.41□□□□□ -1.86
MTERF3Q96E29 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
MTERF3Q96E29 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.41□□□□□ -1.86
MTERF3Q96E29 RPS15AP6-201ENST00000420703 385 ntBASIC3.41□□□□□ -1.86
MTERF3Q96E29 BEND7P1-201ENST00000422058 457 ntBASIC3.41□□□□□ -1.86
MTERF3Q96E29 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.41□□□□□ -1.86
MTERF3Q96E29 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.41□□□□□ -1.86
MTERF3Q96E29 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.41□□□□□ -1.86
MTERF3Q96E29 RPL21P112-201ENST00000434403 463 ntBASIC3.41□□□□□ -1.86
MTERF3Q96E29 AC108734.1-201ENST00000439549 399 ntBASIC3.41□□□□□ -1.86
MTERF3Q96E29 AC006539.3-201ENST00000454258 129 ntBASIC3.41□□□□□ -1.86
MTERF3Q96E29 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.41□□□□□ -1.86
MTERF3Q96E29 RPL31P3-201ENST00000458430 332 ntBASIC3.41□□□□□ -1.86
MTERF3Q96E29 RN7SL594P-201ENST00000470590 287 ntBASIC3.41□□□□□ -1.86
MTERF3Q96E29 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.41□□□□□ -1.86
MTERF3Q96E29 AC116337.2-201ENST00000477662 156 ntBASIC3.41□□□□□ -1.86
MTERF3Q96E29 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.41□□□□□ -1.86
MTERF3Q96E29 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.41□□□□□ -1.86
MTERF3Q96E29 PCBP2P3-201ENST00000509726 843 ntBASIC3.41□□□□□ -1.86
MTERF3Q96E29 AC091965.2-201ENST00000512324 613 ntBASIC3.41□□□□□ -1.86
MTERF3Q96E29 ARL2BPP6-201ENST00000512757 439 ntBASIC3.41□□□□□ -1.86
MTERF3Q96E29 AC026402.1-201ENST00000513642 170 ntBASIC3.41□□□□□ -1.86
MTERF3Q96E29 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.41□□□□□ -1.86
MTERF3Q96E29 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.41□□□□□ -1.86
MTERF3Q96E29 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.41□□□□□ -1.86
MTERF3Q96E29 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.41□□□□□ -1.86
MTERF3Q96E29 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.41□□□□□ -1.86
MTERF3Q96E29 ZNF519P3-201ENST00000557158 1032 ntBASIC3.41□□□□□ -1.86
MTERF3Q96E29 BNIP3P5-201ENST00000562290 498 ntBASIC3.41□□□□□ -1.86
MTERF3Q96E29 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.41□□□□□ -1.86
MTERF3Q96E29 MIR5685-201ENST00000579080 79 ntBASIC3.41□□□□□ -1.86
MTERF3Q96E29 MIR4425-201ENST00000580572 84 ntBASIC3.41□□□□□ -1.86
MTERF3Q96E29 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.41□□□□□ -1.86
MTERF3Q96E29 AC083760.1-201ENST00000589621 670 ntBASIC3.41□□□□□ -1.86
MTERF3Q96E29 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
MTERF3Q96E29 AP001429.1-201ENST00000602568 530 ntBASIC3.41□□□□□ -1.86
MTERF3Q96E29 AC011451.2-201ENST00000604303 598 ntBASIC3.41□□□□□ -1.86
MTERF3Q96E29 AL451086.1-201ENST00000605596 223 ntBASIC3.41□□□□□ -1.86
MTERF3Q96E29 TUG1_1.1-201ENST00000610654 145 ntBASIC3.41□□□□□ -1.86
MTERF3Q96E29 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
MTERF3Q96E29 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.41□□□□□ -1.86
MTERF3Q96E29 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.41□□□□□ -1.86
MTERF3Q96E29 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.41□□□□□ -1.86
MTERF3Q96E29 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
MTERF3Q96E29 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
MTERF3Q96E29 MTND4P4-201ENST00000439033 1366 ntBASIC3.4□□□□□ -1.86
MTERF3Q96E29 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
MTERF3Q96E29 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
MTERF3Q96E29 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
MTERF3Q96E29 Y_RNA.46-201ENST00000362695 102 ntBASIC3.4□□□□□ -1.87
MTERF3Q96E29 Y_RNA.77-201ENST00000362962 107 ntBASIC3.4□□□□□ -1.87
MTERF3Q96E29 RNU5E-5P-201ENST00000365379 116 ntBASIC3.4□□□□□ -1.87
MTERF3Q96E29 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
MTERF3Q96E29 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
MTERF3Q96E29 RNU6-533P-201ENST00000384144 107 ntBASIC3.4□□□□□ -1.87
MTERF3Q96E29 RNU6-882P-201ENST00000391025 103 ntBASIC3.4□□□□□ -1.87
MTERF3Q96E29 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.4□□□□□ -1.87
MTERF3Q96E29 AL136116.1-201ENST00000403591 381 ntBASIC3.4□□□□□ -1.87
MTERF3Q96E29 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
MTERF3Q96E29 RN7SKP142-201ENST00000411236 328 ntBASIC3.4□□□□□ -1.87
MTERF3Q96E29 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.4□□□□□ -1.87
MTERF3Q96E29 RPL17P12-201ENST00000413391 526 ntBASIC3.4□□□□□ -1.87
MTERF3Q96E29 OR1AA1P-201ENST00000419597 916 ntBASIC3.4□□□□□ -1.87
MTERF3Q96E29 SEPT2P1-201ENST00000419651 180 ntBASIC3.4□□□□□ -1.87
MTERF3Q96E29 RPL31P12-201ENST00000422587 358 ntBASIC3.4□□□□□ -1.87
MTERF3Q96E29 AL356583.2-201ENST00000426536 280 ntBASIC3.4□□□□□ -1.87
MTERF3Q96E29 AL158071.1-201ENST00000430315 461 ntBASIC3.4□□□□□ -1.87
MTERF3Q96E29 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.4□□□□□ -1.87
MTERF3Q96E29 MTND1P28-201ENST00000435623 950 ntBASIC3.4□□□□□ -1.87
MTERF3Q96E29 RAC1P7-201ENST00000445367 377 ntBASIC3.4□□□□□ -1.87
MTERF3Q96E29 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.4□□□□□ -1.87
MTERF3Q96E29 AC009961.3-201ENST00000449832 765 ntBASIC3.4□□□□□ -1.87
MTERF3Q96E29 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.4□□□□□ -1.87
MTERF3Q96E29 AP002884.2-201ENST00000471647 395 ntBASIC3.4□□□□□ -1.87
MTERF3Q96E29 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.4□□□□□ -1.87
MTERF3Q96E29 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.4□□□□□ -1.87
MTERF3Q96E29 AC004062.1-201ENST00000509926 645 ntBASIC3.4□□□□□ -1.87
MTERF3Q96E29 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.4□□□□□ -1.87
MTERF3Q96E29 Y_RNA.695-201ENST00000516715 107 ntBASIC3.4□□□□□ -1.87
MTERF3Q96E29 RN7SKP60-201ENST00000516985 239 ntBASIC3.4□□□□□ -1.87
MTERF3Q96E29 OR5D17P-201ENST00000531492 978 ntBASIC3.4□□□□□ -1.87
MTERF3Q96E29 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.4□□□□□ -1.87
MTERF3Q96E29 AC007115.1-201ENST00000546853 234 ntBASIC3.4□□□□□ -1.87
MTERF3Q96E29 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms