Protein–RNA interactions for Protein: Q8NEL0

CCDC54, Coiled-coil domain-containing protein 54, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54Q8NEL0 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC54Q8NEL0 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC54Q8NEL0 RNU6-583P-201ENST00000516012 92 ntBASIC2.63□□□□□ -1.99
CCDC54Q8NEL0 SETP7-201ENST00000552169 453 ntBASIC2.63□□□□□ -1.99
CCDC54Q8NEL0 AC034105.3-201ENST00000565294 442 ntBASIC2.63□□□□□ -1.99
CCDC54Q8NEL0 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC54Q8NEL0 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.63□□□□□ -1.99
CCDC54Q8NEL0 VN1R78P-201ENST00000597393 564 ntBASIC2.63□□□□□ -1.99
CCDC54Q8NEL0 RPL23AP92-201ENST00000603609 255 ntBASIC2.63□□□□□ -1.99
CCDC54Q8NEL0 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.63□□□□□ -1.99
CCDC54Q8NEL0 AC131235.4-201ENST00000609288 620 ntBASIC2.63□□□□□ -1.99
CCDC54Q8NEL0 AL355810.1-201ENST00000614629 552 ntBASIC2.63□□□□□ -1.99
CCDC54Q8NEL0 AL360181.4-201ENST00000621752 134 ntBASIC2.63□□□□□ -1.99
CCDC54Q8NEL0 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
CCDC54Q8NEL0 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.63□□□□□ -1.99
CCDC54Q8NEL0 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.63□□□□□ -1.99
CCDC54Q8NEL0 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 RNU6-413P-201ENST00000384115 107 ntBASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 MIR490-201ENST00000384865 128 ntBASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 RNU6-952P-201ENST00000391164 108 ntBASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 RPL21P32-201ENST00000419877 477 ntBASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 AC099677.1-201ENST00000420575 175 ntBASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 CDC27P1-201ENST00000445384 715 ntBASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 RNU7-136P-201ENST00000458819 69 ntBASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 AC008155.2-201ENST00000464337 397 ntBASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 AC023424.2-201ENST00000493479 777 ntBASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 AC006390.1-201ENST00000508068 283 ntBASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 AC053481.3-201ENST00000577881 843 ntBASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 ZNF415P1-201ENST00000582279 1166 ntBASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 AC006504.3-201ENST00000586818 523 ntBASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 BNIP3P26-201ENST00000600827 554 ntBASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 AL031985.2-201ENST00000600955 480 ntBASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 AL020997.2-201ENST00000602607 184 ntBASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 AC012119.1-201ENST00000603184 222 ntBASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 PRELID3BP8-201ENST00000604148 295 ntBASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 AC010738.1-201ENST00000604970 987 ntBASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 AC055876.5-201ENST00000605667 259 ntBASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 AC243773.3-201ENST00000613270 256 ntBASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
CCDC54Q8NEL0 AC091564.4-201ENST00000533934 2194 ntBASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 AP003122.5-201ENST00000527668 3766 ntBASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 RNU6-1074P-201ENST00000383995 104 ntBASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 AC025750.1-201ENST00000399891 379 ntBASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 CYCSP45-201ENST00000402289 315 ntBASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 FO393413.1-201ENST00000402892 195 ntBASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 TPMTP2-201ENST00000414372 726 ntBASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 BX682237.1-201ENST00000415016 335 ntBASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 AC106883.1-201ENST00000418805 562 ntBASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 RNA5SP310-201ENST00000459084 116 ntBASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 RPL23AP11-201ENST00000475260 469 ntBASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 AP004217.1-201ENST00000480579 346 ntBASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 AIG1P1-201ENST00000503376 148 ntBASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 WBP1LP4-201ENST00000505043 344 ntBASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 SEM1P1-201ENST00000506694 209 ntBASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 CBX3P3-201ENST00000508108 532 ntBASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 HSPA8P13-201ENST00000523715 472 ntBASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 SNRPGP16-201ENST00000533275 226 ntBASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 AL391156.1-201ENST00000554965 554 ntBASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 MTCO3P13-201ENST00000577757 781 ntBASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 OR4K8P-201ENST00000578842 1048 ntBASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 AP001330.4-201ENST00000604350 154 ntBASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 AL390208.1-201ENST00000605885 644 ntBASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 AC080013.3-201ENST00000606839 578 ntBASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 AL159169.3-201ENST00000608871 561 ntBASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC54Q8NEL0 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms