Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 RPS24P1-201ENST00000438550 371 ntBASIC3.52□□□□□ -1.85
BEST3Q8N1M1 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.52□□□□□ -1.85
BEST3Q8N1M1 PGBD4P3-201ENST00000440731 581 ntBASIC3.52□□□□□ -1.85
BEST3Q8N1M1 AC010655.1-201ENST00000449336 292 ntBASIC3.52□□□□□ -1.85
BEST3Q8N1M1 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
BEST3Q8N1M1 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
BEST3Q8N1M1 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.52□□□□□ -1.85
BEST3Q8N1M1 UBE2CP3-201ENST00000502715 450 ntBASIC3.52□□□□□ -1.85
BEST3Q8N1M1 HMGN1P11-201ENST00000508668 303 ntBASIC3.52□□□□□ -1.85
BEST3Q8N1M1 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.52□□□□□ -1.85
BEST3Q8N1M1 RNU1-95P-201ENST00000516357 160 ntBASIC3.52□□□□□ -1.85
BEST3Q8N1M1 RNU1-128P-201ENST00000516704 160 ntBASIC3.52□□□□□ -1.85
BEST3Q8N1M1 AP000907.2-201ENST00000530827 353 ntBASIC3.52□□□□□ -1.85
BEST3Q8N1M1 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.52□□□□□ -1.85
BEST3Q8N1M1 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.52□□□□□ -1.85
BEST3Q8N1M1 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.52□□□□□ -1.85
BEST3Q8N1M1 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.52□□□□□ -1.85
BEST3Q8N1M1 RPL21P5-201ENST00000554662 472 ntBASIC3.52□□□□□ -1.85
BEST3Q8N1M1 AL157394.1-201ENST00000562983 1224 ntBASIC3.52□□□□□ -1.85
BEST3Q8N1M1 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.52□□□□□ -1.85
BEST3Q8N1M1 SNORD84-203ENST00000584275 78 ntBASIC3.52□□□□□ -1.85
BEST3Q8N1M1 AC087683.1-201ENST00000591187 441 ntBASIC3.52□□□□□ -1.85
BEST3Q8N1M1 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.52□□□□□ -1.85
BEST3Q8N1M1 AC068790.3-201ENST00000602988 553 ntBASIC3.52□□□□□ -1.85
BEST3Q8N1M1 XIAPP1-201ENST00000603162 600 ntBASIC3.52□□□□□ -1.85
BEST3Q8N1M1 AC008739.3-201ENST00000603262 127 ntBASIC3.52□□□□□ -1.85
BEST3Q8N1M1 SNORA51-201ENST00000606420 132 ntBASIC3.52□□□□□ -1.85
BEST3Q8N1M1 RNU6-87P-201ENST00000607561 108 ntBASIC3.52□□□□□ -1.85
BEST3Q8N1M1 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.52□□□□□ -1.85
BEST3Q8N1M1 AC109347.2-201ENST00000610220 349 ntBASIC3.52□□□□□ -1.85
BEST3Q8N1M1 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.52□□□□□ -1.85
BEST3Q8N1M1 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.52□□□□□ -1.85
BEST3Q8N1M1 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.52□□□□□ -1.85
BEST3Q8N1M1 AL034408.1-202ENST00000636088 415 ntBASIC3.52□□□□□ -1.85
BEST3Q8N1M1 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.52□□□□□ -1.85
BEST3Q8N1M1 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.52□□□□□ -1.85
BEST3Q8N1M1 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
BEST3Q8N1M1 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
BEST3Q8N1M1 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.52□□□□□ -1.85
BEST3Q8N1M1 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
BEST3Q8N1M1 HSPA8P1-201ENST00000425843 1833 ntBASIC3.51□□□□□ -1.85
BEST3Q8N1M1 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.51□□□□□ -1.85
BEST3Q8N1M1 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
BEST3Q8N1M1 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.51□□□□□ -1.85
BEST3Q8N1M1 RNU6-348P-201ENST00000384386 107 ntBASIC3.51□□□□□ -1.85
BEST3Q8N1M1 RNU6-297P-201ENST00000384636 107 ntBASIC3.51□□□□□ -1.85
BEST3Q8N1M1 MIR449B-201ENST00000384995 97 ntBASIC3.51□□□□□ -1.85
BEST3Q8N1M1 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
BEST3Q8N1M1 RAD23BP2-201ENST00000416003 1207 ntBASIC3.51□□□□□ -1.85
BEST3Q8N1M1 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.51□□□□□ -1.85
BEST3Q8N1M1 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.51□□□□□ -1.85
BEST3Q8N1M1 AC233728.2-201ENST00000425348 757 ntBASIC3.51□□□□□ -1.85
BEST3Q8N1M1 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.51□□□□□ -1.85
BEST3Q8N1M1 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.51□□□□□ -1.85
BEST3Q8N1M1 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.51□□□□□ -1.85
BEST3Q8N1M1 AL049734.2-201ENST00000441066 616 ntBASIC3.51□□□□□ -1.85
BEST3Q8N1M1 AL022238.1-201ENST00000442557 355 ntBASIC3.51□□□□□ -1.85
BEST3Q8N1M1 AL121871.1-201ENST00000443413 436 ntBASIC3.51□□□□□ -1.85
BEST3Q8N1M1 RPL17P49-201ENST00000443728 411 ntBASIC3.51□□□□□ -1.85
BEST3Q8N1M1 RPS17P13-201ENST00000448974 407 ntBASIC3.51□□□□□ -1.85
BEST3Q8N1M1 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.51□□□□□ -1.85
BEST3Q8N1M1 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.51□□□□□ -1.85
BEST3Q8N1M1 AC234775.1-201ENST00000454247 670 ntBASIC3.51□□□□□ -1.85
BEST3Q8N1M1 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.51□□□□□ -1.85
BEST3Q8N1M1 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.51□□□□□ -1.85
BEST3Q8N1M1 AC055855.1-201ENST00000489563 579 ntBASIC3.51□□□□□ -1.85
BEST3Q8N1M1 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.51□□□□□ -1.85
BEST3Q8N1M1 AC078817.1-201ENST00000492623 435 ntBASIC3.51□□□□□ -1.85
BEST3Q8N1M1 RPL7P24-201ENST00000493052 752 ntBASIC3.51□□□□□ -1.85
BEST3Q8N1M1 RPL7P23-201ENST00000493874 747 ntBASIC3.51□□□□□ -1.85
BEST3Q8N1M1 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.51□□□□□ -1.85
BEST3Q8N1M1 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.51□□□□□ -1.85
BEST3Q8N1M1 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.51□□□□□ -1.85
BEST3Q8N1M1 RNA5SP164-201ENST00000516533 110 ntBASIC3.51□□□□□ -1.85
BEST3Q8N1M1 AC022616.6-201ENST00000520479 119 ntBASIC3.51□□□□□ -1.85
BEST3Q8N1M1 AC007991.1-201ENST00000522680 631 ntBASIC3.51□□□□□ -1.85
BEST3Q8N1M1 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.51□□□□□ -1.85
BEST3Q8N1M1 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.51□□□□□ -1.85
BEST3Q8N1M1 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.51□□□□□ -1.85
BEST3Q8N1M1 AC137800.2-201ENST00000574375 120 ntBASIC3.51□□□□□ -1.85
BEST3Q8N1M1 MIR3682-201ENST00000581338 84 ntBASIC3.51□□□□□ -1.85
BEST3Q8N1M1 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.51□□□□□ -1.85
BEST3Q8N1M1 AC010928.3-201ENST00000587712 541 ntBASIC3.51□□□□□ -1.85
BEST3Q8N1M1 BNIP3P22-201ENST00000593399 556 ntBASIC3.51□□□□□ -1.85
BEST3Q8N1M1 AC015871.2-201ENST00000603605 948 ntBASIC3.51□□□□□ -1.85
BEST3Q8N1M1 AL049634.3-201ENST00000604968 457 ntBASIC3.51□□□□□ -1.85
BEST3Q8N1M1 AC121334.2-201ENST00000605387 271 ntBASIC3.51□□□□□ -1.85
BEST3Q8N1M1 AL158211.4-201ENST00000606988 584 ntBASIC3.51□□□□□ -1.85
BEST3Q8N1M1 AC012150.2-201ENST00000621300 544 ntBASIC3.51□□□□□ -1.85
BEST3Q8N1M1 AC009268.2-201ENST00000621925 457 ntBASIC3.51□□□□□ -1.85
BEST3Q8N1M1 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.51□□□□□ -1.85
BEST3Q8N1M1 AL392088.2-201ENST00000637607 285 ntBASIC3.51□□□□□ -1.85
BEST3Q8N1M1 AC099654.13-201ENST00000639774 207 ntBASIC3.51□□□□□ -1.85
BEST3Q8N1M1 AC024560.2-201ENST00000507981 1497 ntBASIC3.51□□□□□ -1.85
BEST3Q8N1M1 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
BEST3Q8N1M1 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
BEST3Q8N1M1 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.51□□□□□ -1.85
BEST3Q8N1M1 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
BEST3Q8N1M1 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.51□□□□□ -1.85
BEST3Q8N1M1 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms