Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.05□□□□□ -2.08
DDX60Q8IY21 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
DDX60Q8IY21 RNA5SP27-201ENST00000363839 119 ntBASIC2.05□□□□□ -2.08
DDX60Q8IY21 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
DDX60Q8IY21 BX510359.4-201ENST00000423750 193 ntBASIC2.05□□□□□ -2.08
DDX60Q8IY21 TPT1P14-201ENST00000448018 505 ntBASIC2.05□□□□□ -2.08
DDX60Q8IY21 OR7L1P-201ENST00000456181 380 ntBASIC2.05□□□□□ -2.08
DDX60Q8IY21 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
DDX60Q8IY21 AP001542.2-201ENST00000593141 364 ntBASIC2.05□□□□□ -2.08
DDX60Q8IY21 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.05□□□□□ -2.08
DDX60Q8IY21 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.05□□□□□ -2.08
DDX60Q8IY21 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
DDX60Q8IY21 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
DDX60Q8IY21 RNU2-37P-201ENST00000410695 177 ntBASIC2.04□□□□□ -2.08
DDX60Q8IY21 AC073264.1-201ENST00000411508 416 ntBASIC2.04□□□□□ -2.08
DDX60Q8IY21 AC004965.1-201ENST00000413033 213 ntBASIC2.04□□□□□ -2.08
DDX60Q8IY21 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.04□□□□□ -2.08
DDX60Q8IY21 RNA5SP364-201ENST00000516938 78 ntBASIC2.04□□□□□ -2.08
DDX60Q8IY21 ARL2BPP2-201ENST00000550907 489 ntBASIC2.04□□□□□ -2.08
DDX60Q8IY21 SNHG22-203ENST00000617833 660 ntBASIC2.04□□□□□ -2.08
DDX60Q8IY21 AC090897.3-201ENST00000636973 1157 ntBASIC2.04□□□□□ -2.08
DDX60Q8IY21 RPS7P9-201ENST00000414704 586 ntBASIC2.03□□□□□ -2.08
DDX60Q8IY21 VN1R31P-201ENST00000417498 730 ntBASIC2.03□□□□□ -2.08
DDX60Q8IY21 HMGN2P38-201ENST00000423806 265 ntBASIC2.03□□□□□ -2.08
DDX60Q8IY21 MTCO1P42-201ENST00000457379 726 ntBASIC2.03□□□□□ -2.08
DDX60Q8IY21 AC069528.1-202ENST00000482888 637 ntBASIC2.03□□□□□ -2.08
DDX60Q8IY21 RPL37P25-201ENST00000507308 276 ntBASIC2.03□□□□□ -2.08
DDX60Q8IY21 TRMT112P2-201ENST00000512910 132 ntBASIC2.03□□□□□ -2.08
DDX60Q8IY21 AC239860.2-201ENST00000525886 270 ntBASIC2.03□□□□□ -2.08
DDX60Q8IY21 HSPE1P20-201ENST00000538133 289 ntBASIC2.03□□□□□ -2.08
DDX60Q8IY21 NOP56P3-201ENST00000549457 385 ntBASIC2.03□□□□□ -2.08
DDX60Q8IY21 AC007375.1-201ENST00000554513 578 ntBASIC2.03□□□□□ -2.08
DDX60Q8IY21 AC024614.2-201ENST00000577584 372 ntBASIC2.03□□□□□ -2.08
DDX60Q8IY21 AL158801.5-201ENST00000623123 465 ntBASIC2.03□□□□□ -2.08
DDX60Q8IY21 ZNF876P-202ENST00000398732 1485 ntBASIC2.03□□□□□ -2.08
DDX60Q8IY21 MCTS2P-201ENST00000394552 546 ntBASIC2.03□□□□□ -2.09
DDX60Q8IY21 RPL21P75-201ENST00000396599 483 ntBASIC2.03□□□□□ -2.09
DDX60Q8IY21 RPL21P28-201ENST00000401418 483 ntBASIC2.03□□□□□ -2.09
DDX60Q8IY21 AL592114.1-201ENST00000403842 483 ntBASIC2.03□□□□□ -2.09
DDX60Q8IY21 SUMO2P12-201ENST00000405924 140 ntBASIC2.03□□□□□ -2.09
DDX60Q8IY21 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.03□□□□□ -2.09
DDX60Q8IY21 HMGN1P8-201ENST00000463578 288 ntBASIC2.03□□□□□ -2.09
DDX60Q8IY21 AC011979.1-201ENST00000472300 483 ntBASIC2.03□□□□□ -2.09
DDX60Q8IY21 RPL21P93-201ENST00000480465 489 ntBASIC2.03□□□□□ -2.09
DDX60Q8IY21 AC233702.1-201ENST00000482905 502 ntBASIC2.03□□□□□ -2.09
DDX60Q8IY21 AC093591.1-201ENST00000491435 481 ntBASIC2.03□□□□□ -2.09
DDX60Q8IY21 RPL21P16-201ENST00000495531 483 ntBASIC2.03□□□□□ -2.09
DDX60Q8IY21 AC067805.1-201ENST00000559344 470 ntBASIC2.03□□□□□ -2.09
DDX60Q8IY21 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
DDX60Q8IY21 RNU6-146P-201ENST00000384602 108 ntBASIC2.02□□□□□ -2.09
DDX60Q8IY21 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.02□□□□□ -2.09
DDX60Q8IY21 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.02□□□□□ -2.09
DDX60Q8IY21 AC245517.4-201ENST00000448601 281 ntBASIC2.02□□□□□ -2.09
DDX60Q8IY21 AC135721.1-201ENST00000497954 479 ntBASIC2.02□□□□□ -2.09
DDX60Q8IY21 RPL23AP55-201ENST00000498163 452 ntBASIC2.02□□□□□ -2.09
DDX60Q8IY21 AC109464.2-201ENST00000510242 943 ntBASIC2.02□□□□□ -2.09
DDX60Q8IY21 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC2.02□□□□□ -2.09
DDX60Q8IY21 AC022790.1-201ENST00000522872 204 ntBASIC2.02□□□□□ -2.09
DDX60Q8IY21 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.02□□□□□ -2.09
DDX60Q8IY21 AC012360.2-201ENST00000609349 391 ntBASIC2.02□□□□□ -2.09
DDX60Q8IY21 AC026241.1-201ENST00000517873 2142 ntBASIC2.01□□□□□ -2.09
DDX60Q8IY21 AC090740.1-201ENST00000623193 2262 ntBASIC2.01□□□□□ -2.09
DDX60Q8IY21 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
DDX60Q8IY21 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
DDX60Q8IY21 RNA5SP393-201ENST00000363423 117 ntBASIC2.01□□□□□ -2.09
DDX60Q8IY21 Z98749.2-208ENST00000381646 500 ntBASIC2.01□□□□□ -2.09
DDX60Q8IY21 RNU2-68P-201ENST00000410878 191 ntBASIC2.01□□□□□ -2.09
DDX60Q8IY21 AC234782.4-201ENST00000417646 1048 ntBASIC2.01□□□□□ -2.09
DDX60Q8IY21 RPS15AP1-201ENST00000457423 391 ntBASIC2.01□□□□□ -2.09
DDX60Q8IY21 ARPC3P2-201ENST00000457786 533 ntBASIC2.01□□□□□ -2.09
DDX60Q8IY21 AP000873.1-201ENST00000463987 400 ntBASIC2.01□□□□□ -2.09
DDX60Q8IY21 AC012170.1-201ENST00000495139 359 ntBASIC2.01□□□□□ -2.09
DDX60Q8IY21 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.01□□□□□ -2.09
DDX60Q8IY21 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC2.01□□□□□ -2.09
DDX60Q8IY21 AL159169.2-201ENST00000610061 1269 ntBASIC2.01□□□□□ -2.09
DDX60Q8IY21 uc_338.20-201ENST00000621563 178 ntBASIC2.01□□□□□ -2.09
DDX60Q8IY21 AC090617.7-201ENST00000623952 126 ntBASIC2.01□□□□□ -2.09
DDX60Q8IY21 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2□□□□□ -2.09
DDX60Q8IY21 RNA5SP295-201ENST00000362655 121 ntBASIC2□□□□□ -2.09
DDX60Q8IY21 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2□□□□□ -2.09
DDX60Q8IY21 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2□□□□□ -2.09
DDX60Q8IY21 RPL7P31-201ENST00000450192 724 ntBASIC2□□□□□ -2.09
DDX60Q8IY21 RPL23AP41-201ENST00000484754 458 ntBASIC2□□□□□ -2.09
DDX60Q8IY21 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2□□□□□ -2.09
DDX60Q8IY21 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2□□□□□ -2.09
DDX60Q8IY21 uc_338.5-201ENST00000611839 155 ntBASIC2□□□□□ -2.09
DDX60Q8IY21 AC027514.1-201ENST00000588561 1603 ntBASIC2□□□□□ -2.09
DDX60Q8IY21 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
DDX60Q8IY21 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
DDX60Q8IY21 OR5AQ1P-202ENST00000641257 1534 ntBASIC2□□□□□ -2.09
DDX60Q8IY21 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2□□□□□ -2.09
DDX60Q8IY21 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2□□□□□ -2.09
DDX60Q8IY21 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2□□□□□ -2.09
DDX60Q8IY21 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1.99□□□□□ -2.09
DDX60Q8IY21 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
DDX60Q8IY21 RNU6-707P-201ENST00000364647 95 ntBASIC1.99□□□□□ -2.09
DDX60Q8IY21 HMGB1P27-201ENST00000431429 603 ntBASIC1.99□□□□□ -2.09
DDX60Q8IY21 AC021146.7-201ENST00000509604 775 ntBASIC1.99□□□□□ -2.09
DDX60Q8IY21 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.99□□□□□ -2.09
DDX60Q8IY21 AP000790.1-201ENST00000528891 737 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms