Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
CSMD3Q7Z407 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC1.23□□□□□ -2.21
CSMD3Q7Z407 AP000553.5-201ENST00000641933 54 ntBASIC1.23□□□□□ -2.21
CSMD3Q7Z407 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CSMD3Q7Z407 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
CSMD3Q7Z407 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CSMD3Q7Z407 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CSMD3Q7Z407 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
CSMD3Q7Z407 RNU2-32P-201ENST00000411193 191 ntBASIC1.23□□□□□ -2.21
CSMD3Q7Z407 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC1.23□□□□□ -2.21
CSMD3Q7Z407 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.23□□□□□ -2.21
CSMD3Q7Z407 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC1.23□□□□□ -2.21
CSMD3Q7Z407 AC105429.2-201ENST00000610567 517 ntBASIC1.23□□□□□ -2.21
CSMD3Q7Z407 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC1.23□□□□□ -2.21
CSMD3Q7Z407 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.22□□□□□ -2.21
CSMD3Q7Z407 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC1.22□□□□□ -2.21
CSMD3Q7Z407 AL513321.1-201ENST00000441175 761 ntBASIC1.22□□□□□ -2.21
CSMD3Q7Z407 XKRY2-201ENST00000442362 1093 ntBASIC1.22□□□□□ -2.21
CSMD3Q7Z407 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.22□□□□□ -2.21
CSMD3Q7Z407 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.22□□□□□ -2.21
CSMD3Q7Z407 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC1.22□□□□□ -2.21
CSMD3Q7Z407 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.22□□□□□ -2.21
CSMD3Q7Z407 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.22□□□□□ -2.21
CSMD3Q7Z407 AC060766.3-201ENST00000591442 263 ntBASIC1.22□□□□□ -2.21
CSMD3Q7Z407 uc_338.5-201ENST00000611839 155 ntBASIC1.22□□□□□ -2.21
CSMD3Q7Z407 AC009318.3-201ENST00000616916 503 ntBASIC1.22□□□□□ -2.21
CSMD3Q7Z407 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC1.22□□□□□ -2.21
CSMD3Q7Z407 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC1.22□□□□□ -2.21
CSMD3Q7Z407 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC1.22□□□□□ -2.21
CSMD3Q7Z407 RNA5SP338-201ENST00000410495 85 ntBASIC1.22□□□□□ -2.21
CSMD3Q7Z407 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC1.22□□□□□ -2.21
CSMD3Q7Z407 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC1.22□□□□□ -2.21
CSMD3Q7Z407 AC027673.1-201ENST00000456245 405 ntBASIC1.22□□□□□ -2.21
CSMD3Q7Z407 AC025033.1-201ENST00000463883 194 ntBASIC1.22□□□□□ -2.21
CSMD3Q7Z407 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.22□□□□□ -2.21
CSMD3Q7Z407 AC084757.1-201ENST00000559987 490 ntBASIC1.22□□□□□ -2.21
CSMD3Q7Z407 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.22□□□□□ -2.21
CSMD3Q7Z407 MIR6734-201ENST00000621166 68 ntBASIC1.22□□□□□ -2.21
CSMD3Q7Z407 MIR3199-2-201ENST00000636243 86 ntBASIC1.22□□□□□ -2.21
CSMD3Q7Z407 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CSMD3Q7Z407 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.22□□□□□ -2.21
CSMD3Q7Z407 RNU6-1027P-201ENST00000383998 107 ntBASIC1.22□□□□□ -2.21
CSMD3Q7Z407 MIR625-201ENST00000385047 85 ntBASIC1.22□□□□□ -2.21
CSMD3Q7Z407 MTND4P13-201ENST00000402078 1023 ntBASIC1.22□□□□□ -2.21
CSMD3Q7Z407 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC1.22□□□□□ -2.21
CSMD3Q7Z407 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC1.22□□□□□ -2.21
CSMD3Q7Z407 MTCO1P30-201ENST00000515244 580 ntBASIC1.22□□□□□ -2.21
CSMD3Q7Z407 AP002748.2-201ENST00000528671 348 ntBASIC1.22□□□□□ -2.21
CSMD3Q7Z407 AC234775.3-201ENST00000564612 656 ntBASIC1.22□□□□□ -2.21
CSMD3Q7Z407 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC1.22□□□□□ -2.21
CSMD3Q7Z407 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.22□□□□□ -2.21
CSMD3Q7Z407 AC073348.1-201ENST00000623002 331 ntBASIC1.22□□□□□ -2.21
CSMD3Q7Z407 OR1S1-201ENST00000624470 978 ntBASIC1.22□□□□□ -2.21
CSMD3Q7Z407 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CSMD3Q7Z407 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CSMD3Q7Z407 MTND5P3-201ENST00000438536 1800 ntBASIC1.21□□□□□ -2.22
CSMD3Q7Z407 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
CSMD3Q7Z407 EIF1AXP1-201ENST00000419267 435 ntBASIC1.21□□□□□ -2.22
CSMD3Q7Z407 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.21□□□□□ -2.22
CSMD3Q7Z407 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.21□□□□□ -2.22
CSMD3Q7Z407 AL590664.1-201ENST00000448065 339 ntBASIC1.21□□□□□ -2.22
CSMD3Q7Z407 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.21□□□□□ -2.22
CSMD3Q7Z407 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.21□□□□□ -2.22
CSMD3Q7Z407 AC016957.1-201ENST00000534895 309 ntBASIC1.21□□□□□ -2.22
CSMD3Q7Z407 CD69-203ENST00000536709 1020 ntTSL 2 BASIC1.21□□□□□ -2.22
CSMD3Q7Z407 AC067805.1-201ENST00000559344 470 ntBASIC1.21□□□□□ -2.22
CSMD3Q7Z407 AC015720.1-201ENST00000565251 277 ntBASIC1.21□□□□□ -2.22
CSMD3Q7Z407 AC007687.1-201ENST00000602704 304 ntBASIC1.21□□□□□ -2.22
CSMD3Q7Z407 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
CSMD3Q7Z407 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC1.21□□□□□ -2.22
CSMD3Q7Z407 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
CSMD3Q7Z407 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.21□□□□□ -2.22
CSMD3Q7Z407 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CSMD3Q7Z407 AC104435.1-201ENST00000483483 166 ntBASIC1.21□□□□□ -2.22
CSMD3Q7Z407 AC006483.1-201ENST00000487308 313 ntBASIC1.21□□□□□ -2.22
CSMD3Q7Z407 AIG1P1-201ENST00000503376 148 ntBASIC1.21□□□□□ -2.22
CSMD3Q7Z407 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.21□□□□□ -2.22
CSMD3Q7Z407 OR8X1P-201ENST00000534542 869 ntBASIC1.21□□□□□ -2.22
CSMD3Q7Z407 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.21□□□□□ -2.22
CSMD3Q7Z407 MIR4448-201ENST00000584360 86 ntBASIC1.21□□□□□ -2.22
CSMD3Q7Z407 AC083899.3-201ENST00000603413 594 ntBASIC1.21□□□□□ -2.22
CSMD3Q7Z407 AC091488.1-201ENST00000604239 660 ntBASIC1.21□□□□□ -2.22
CSMD3Q7Z407 Y_RNA.36-201ENST00000362602 112 ntBASIC1.2□□□□□ -2.22
CSMD3Q7Z407 AF131216.2-201ENST00000512316 564 ntBASIC1.2□□□□□ -2.22
CSMD3Q7Z407 RPL21P5-201ENST00000554662 472 ntBASIC1.2□□□□□ -2.22
CSMD3Q7Z407 AC048347.1-201ENST00000624621 427 ntBASIC1.2□□□□□ -2.22
CSMD3Q7Z407 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CSMD3Q7Z407 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.2□□□□□ -2.22
CSMD3Q7Z407 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.2□□□□□ -2.22
CSMD3Q7Z407 HIGD1AP11-201ENST00000438361 280 ntBASIC1.2□□□□□ -2.22
CSMD3Q7Z407 COX6CP12-201ENST00000446748 202 ntBASIC1.2□□□□□ -2.22
CSMD3Q7Z407 RPL7P31-201ENST00000450192 724 ntBASIC1.2□□□□□ -2.22
CSMD3Q7Z407 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.2□□□□□ -2.22
CSMD3Q7Z407 HSPE1P22-201ENST00000456856 327 ntBASIC1.2□□□□□ -2.22
CSMD3Q7Z407 RPL23AP62-201ENST00000463396 453 ntBASIC1.2□□□□□ -2.22
CSMD3Q7Z407 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.2□□□□□ -2.22
CSMD3Q7Z407 AC109464.2-201ENST00000510242 943 ntBASIC1.2□□□□□ -2.22
CSMD3Q7Z407 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.2□□□□□ -2.22
CSMD3Q7Z407 MYL12BP1-201ENST00000569826 507 ntBASIC1.2□□□□□ -2.22
CSMD3Q7Z407 RPS3AP23-202ENST00000574601 686 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms