Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AP004247.1-201ENST00000531556 1289 ntBASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 AL031985.2-201ENST00000600955 480 ntBASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 AC112187.2-201ENST00000604345 283 ntBASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 AL590099.1-201ENST00000615276 138 ntBASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 U7.8-201ENST00000619968 63 ntBASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 AC002550.2-201ENST00000621246 394 ntBASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 OR8B1P-202ENST00000641132 1178 ntBASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 AC092435.3-201ENST00000565538 3654 ntBASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 MAPK10-322ENST00000641485 4530 ntBASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 AC006504.1-201ENST00000562493 3666 ntBASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 RNU6-97P-201ENST00000363387 104 ntBASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 RNU6-1207P-201ENST00000384343 107 ntBASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 SNORD116-8-201ENST00000384365 95 ntBASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 U8.11-201ENST00000384699 133 ntBASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 U8.12-201ENST00000384701 133 ntBASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 MIR134-201ENST00000385258 73 ntBASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 AL512649.1-201ENST00000428997 581 ntBASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 AC024082.2-201ENST00000434771 238 ntBASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 NDUFB4P6-201ENST00000436819 366 ntBASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 AL445567.1-201ENST00000439121 144 ntBASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 AC122718.1-201ENST00000439448 744 ntBASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 AL831737.1-201ENST00000441288 271 ntBASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 AC099563.1-201ENST00000456086 418 ntBASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 U8.18-201ENST00000459285 133 ntBASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 FAM133DP-201ENST00000464802 691 ntBASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 AC104472.2-201ENST00000469035 601 ntBASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 AC084357.1-201ENST00000473404 255 ntBASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 AC034222.1-201ENST00000494052 532 ntBASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 AC021678.1-201ENST00000505195 936 ntBASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 AC023632.4-201ENST00000517783 191 ntBASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 AC023161.2-201ENST00000551218 780 ntBASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 DNAJC8P1-201ENST00000554535 372 ntBASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 BNIP3P23-201ENST00000599655 511 ntBASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 AC011451.2-201ENST00000604303 598 ntBASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 AC092354.2-201ENST00000607786 514 ntBASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 AC127502.3-201ENST00000636170 1206 ntBASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 AC006927.3-201ENST00000638789 384 ntBASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 AC009812.4-201ENST00000569134 1805 ntBASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.41□□□□□ -1.86
NUP54Q7Z3B4 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
NUP54Q7Z3B4 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
NUP54Q7Z3B4 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.4□□□□□ -1.86
NUP54Q7Z3B4 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
NUP54Q7Z3B4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.4□□□□□ -1.87
NUP54Q7Z3B4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NUP54Q7Z3B4 MRPL50P2-201ENST00000416821 482 ntBASIC3.4□□□□□ -1.87
NUP54Q7Z3B4 AC006989.1-201ENST00000427212 131 ntBASIC3.4□□□□□ -1.87
NUP54Q7Z3B4 AL445584.1-201ENST00000431451 330 ntBASIC3.4□□□□□ -1.87
NUP54Q7Z3B4 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.4□□□□□ -1.87
NUP54Q7Z3B4 AC097262.1-201ENST00000452559 548 ntBASIC3.4□□□□□ -1.87
NUP54Q7Z3B4 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.4□□□□□ -1.87
NUP54Q7Z3B4 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.4□□□□□ -1.87
NUP54Q7Z3B4 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.4□□□□□ -1.87
NUP54Q7Z3B4 RPL30P9-201ENST00000465586 330 ntBASIC3.4□□□□□ -1.87
NUP54Q7Z3B4 ACTR3P3-201ENST00000480448 893 ntBASIC3.4□□□□□ -1.87
NUP54Q7Z3B4 AC021382.1-201ENST00000483523 359 ntBASIC3.4□□□□□ -1.87
NUP54Q7Z3B4 AC068724.1-201ENST00000487100 792 ntBASIC3.4□□□□□ -1.87
NUP54Q7Z3B4 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.4□□□□□ -1.87
NUP54Q7Z3B4 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.4□□□□□ -1.87
NUP54Q7Z3B4 RNU6-759P-201ENST00000516740 103 ntBASIC3.4□□□□□ -1.87
NUP54Q7Z3B4 RNU1-45P-201ENST00000517191 141 ntBASIC3.4□□□□□ -1.87
NUP54Q7Z3B4 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.4□□□□□ -1.87
NUP54Q7Z3B4 AC008489.1-201ENST00000524271 483 ntBASIC3.4□□□□□ -1.87
NUP54Q7Z3B4 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.4□□□□□ -1.87
NUP54Q7Z3B4 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms