Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 EXOC5P1-201ENST00000510543 1969 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 ZNF807-201ENST00000328088 1707 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 RNU1-83P-201ENST00000363426 164 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 RNU6-1032P-201ENST00000384100 107 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 RNU6-890P-201ENST00000384121 107 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 Y_RNA.527-201ENST00000384573 102 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 MT-TR-201ENST00000387439 65 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 AL360182.1-201ENST00000397433 468 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 AL109755.1-201ENST00000401791 649 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 RPL31P2-201ENST00000413849 377 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 BX682237.1-201ENST00000415016 335 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 UBE2FP1-201ENST00000416536 447 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 TDGF1P1-201ENST00000445734 527 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 RPL12P25-201ENST00000455592 494 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 RN7SL443P-201ENST00000464331 290 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 RPS20P21-201ENST00000466859 343 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 AC022795.1-201ENST00000473808 480 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 RN7SL727P-201ENST00000482164 296 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 AC008638.1-201ENST00000506035 866 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 AC079140.5-201ENST00000507882 310 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 RNU6-764P-201ENST00000516396 105 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 AC092490.3-201ENST00000545370 572 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 SETP7-201ENST00000552169 453 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 AC008521.1-201ENST00000587471 187 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 AC011447.4-201ENST00000587562 111 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 AC006329.2-201ENST00000611491 394 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 MIR6128-201ENST00000615528 109 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 AC010378.1-201ENST00000619270 362 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 AC098657.3-201ENST00000620434 263 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 AL589994.2-201ENST00000621124 579 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 AC092608.2-201ENST00000624427 218 ntBASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF111Q6ZNA4 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 Y_RNA.135-201ENST00000363439 95 ntBASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 Y_RNA.149-201ENST00000363558 117 ntBASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 RNA5SP507-201ENST00000363603 121 ntBASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 U8.4-201ENST00000363626 134 ntBASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 RNU6-637P-201ENST00000384050 107 ntBASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 SNORA75B-201ENST00000384053 137 ntBASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 Y_RNA.557-201ENST00000384680 107 ntBASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 RNU6-387P-201ENST00000411331 105 ntBASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 RPL21P24-201ENST00000413752 448 ntBASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 CYCSP10-201ENST00000417973 294 ntBASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 DDX39BP1-205ENST00000422507 192 ntBASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 RPS12P5-201ENST00000423449 371 ntBASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 AC018865.2-201ENST00000423631 129 ntBASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 RPL7P28-201ENST00000437739 740 ntBASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 AL450023.3-201ENST00000440592 271 ntBASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 AL731563.1-201ENST00000442202 214 ntBASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 PPIAP3-201ENST00000450588 505 ntBASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 AC092647.2-201ENST00000452998 253 ntBASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 AC097484.1-201ENST00000471148 389 ntBASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 RN7SL817P-201ENST00000480777 288 ntBASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 RN7SL441P-201ENST00000492388 296 ntBASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 AC008953.1-201ENST00000497334 318 ntBASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms