Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 CUL1P1-201ENST00000509510 2425 ntBASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 LINC02471-203ENST00000641941 4752 ntBASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 RNU6-169P-201ENST00000365336 107 ntBASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 RNA5SP87-201ENST00000384155 118 ntBASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 RNU6-1197P-201ENST00000391183 107 ntBASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 RNU6-192P-201ENST00000391253 100 ntBASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 Z98745.1-201ENST00000402553 494 ntBASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 Y_RNA.599-201ENST00000410489 109 ntBASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 RNU2-62P-201ENST00000410868 191 ntBASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 AC127391.1-201ENST00000411737 98 ntBASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 AL031779.1-201ENST00000415663 330 ntBASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 Z74696.2-201ENST00000436514 498 ntBASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 ISCUP1-201ENST00000454451 448 ntBASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 RPL38P1-201ENST00000460914 211 ntBASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 RPS27AP1-201ENST00000475545 471 ntBASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 AL592156.1-201ENST00000508758 304 ntBASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 Vault.3-201ENST00000516676 95 ntBASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 AC022690.1-201ENST00000526681 550 ntBASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 AP006289.1-201ENST00000538089 277 ntBASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 AC124947.2-202ENST00000552735 133 ntBASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 RN7SL652P-201ENST00000577769 300 ntBASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 MIR4330-201ENST00000579077 105 ntBASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 AC080078.2-201ENST00000603766 501 ntBASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 AL133173.2-201ENST00000614270 90 ntBASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
PPP4R4Q6NUP7 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 CR848007.1-201ENST00000442354 1699 ntBASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 RNA5SP307-201ENST00000362863 116 ntBASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 RNU6-1284P-201ENST00000363701 100 ntBASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 RNU6-1042P-201ENST00000384204 107 ntBASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 RNU6-39P-201ENST00000384344 107 ntBASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 Y_RNA.516-201ENST00000384541 124 ntBASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 AL590704.1-201ENST00000402856 794 ntBASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 AL359634.1-202ENST00000404721 284 ntBASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 RN7SKP267-201ENST00000410381 285 ntBASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 RNU2-8P-201ENST00000410727 190 ntBASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 RN7SKP140-201ENST00000411196 284 ntBASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 PIGFP2-201ENST00000421400 651 ntBASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 RPS12P10-201ENST00000427031 377 ntBASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 TAAR7P-201ENST00000436141 242 ntBASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 SETP5-201ENST00000437270 562 ntBASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 AC093156.1-201ENST00000440382 670 ntBASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 MTND2P24-201ENST00000453434 806 ntBASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 RNA5SP310-201ENST00000459084 116 ntBASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 AC006463.2-201ENST00000473326 348 ntBASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 IGLV2-34-201ENST00000490007 283 ntBASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 RPS27AP13-201ENST00000498403 237 ntBASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 AC108078.1-201ENST00000508073 725 ntBASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 AC245505.1-201ENST00000556398 224 ntBASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 RPL23AP97-201ENST00000568955 471 ntBASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 AC245014.2-201ENST00000603689 287 ntBASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 AC013553.2-201ENST00000604244 589 ntBASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 AC008277.2-201ENST00000605196 797 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms