Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.07□□□□□ -1.92
ATL3Q6DD88 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.07□□□□□ -1.92
ATL3Q6DD88 AC092393.1-201ENST00000439625 742 ntBASIC3.07□□□□□ -1.92
ATL3Q6DD88 RABEPKP1-201ENST00000440529 1026 ntBASIC3.07□□□□□ -1.92
ATL3Q6DD88 MTATP6P14-201ENST00000455189 673 ntBASIC3.07□□□□□ -1.92
ATL3Q6DD88 AC010625.1-201ENST00000511296 403 ntBASIC3.07□□□□□ -1.92
ATL3Q6DD88 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.07□□□□□ -1.92
ATL3Q6DD88 RNU6-1095P-201ENST00000516148 108 ntBASIC3.07□□□□□ -1.92
ATL3Q6DD88 RNU6-1261P-201ENST00000517194 104 ntBASIC3.07□□□□□ -1.92
ATL3Q6DD88 AC010376.1-201ENST00000522101 334 ntBASIC3.07□□□□□ -1.92
ATL3Q6DD88 OR4P1P-201ENST00000530808 1136 ntBASIC3.07□□□□□ -1.92
ATL3Q6DD88 OR7K1P-201ENST00000546439 926 ntBASIC3.07□□□□□ -1.92
ATL3Q6DD88 AC008127.2-201ENST00000549925 1075 ntBASIC3.07□□□□□ -1.92
ATL3Q6DD88 AC007954.1-201ENST00000554198 494 ntBASIC3.07□□□□□ -1.92
ATL3Q6DD88 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.07□□□□□ -1.92
ATL3Q6DD88 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.07□□□□□ -1.92
ATL3Q6DD88 TMF1P1-201ENST00000576058 373 ntBASIC3.07□□□□□ -1.92
ATL3Q6DD88 MIR3912-201ENST00000577566 105 ntBASIC3.07□□□□□ -1.92
ATL3Q6DD88 AC053481.3-201ENST00000577881 843 ntBASIC3.07□□□□□ -1.92
ATL3Q6DD88 AC060766.3-201ENST00000591442 263 ntBASIC3.07□□□□□ -1.92
ATL3Q6DD88 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.07□□□□□ -1.92
ATL3Q6DD88 DUXAP4-201ENST00000603046 613 ntBASIC3.07□□□□□ -1.92
ATL3Q6DD88 AC123767.1-202ENST00000620407 817 ntBASIC3.07□□□□□ -1.92
ATL3Q6DD88 AP003122.6-201ENST00000623831 495 ntBASIC3.07□□□□□ -1.92
ATL3Q6DD88 MKKS-204ENST00000639674 192 ntBASIC3.07□□□□□ -1.92
ATL3Q6DD88 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.07□□□□□ -1.92
ATL3Q6DD88 MAPK10-322ENST00000641485 4530 ntBASIC3.07□□□□□ -1.92
ATL3Q6DD88 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.07□□□□□ -1.92
ATL3Q6DD88 AP005901.5-201ENST00000545779 1796 ntBASIC3.07□□□□□ -1.92
ATL3Q6DD88 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
ATL3Q6DD88 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
ATL3Q6DD88 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
ATL3Q6DD88 RNU5E-10P-201ENST00000363506 118 ntBASIC3.06□□□□□ -1.92
ATL3Q6DD88 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
ATL3Q6DD88 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.06□□□□□ -1.92
ATL3Q6DD88 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
ATL3Q6DD88 MIR9-1-201ENST00000385198 89 ntBASIC3.06□□□□□ -1.92
ATL3Q6DD88 MTND4P13-201ENST00000402078 1023 ntBASIC3.06□□□□□ -1.92
ATL3Q6DD88 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
ATL3Q6DD88 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
ATL3Q6DD88 MTCO1P3-201ENST00000429327 192 ntBASIC3.06□□□□□ -1.92
ATL3Q6DD88 AC008571.1-201ENST00000467232 300 ntBASIC3.06□□□□□ -1.92
ATL3Q6DD88 MTND3P3-201ENST00000505004 126 ntBASIC3.06□□□□□ -1.92
ATL3Q6DD88 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.06□□□□□ -1.92
ATL3Q6DD88 RNA5SP341-201ENST00000516261 117 ntBASIC3.06□□□□□ -1.92
ATL3Q6DD88 RN7SKP31-201ENST00000516354 278 ntBASIC3.06□□□□□ -1.92
ATL3Q6DD88 ERHP1-201ENST00000523006 310 ntBASIC3.06□□□□□ -1.92
ATL3Q6DD88 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.06□□□□□ -1.92
ATL3Q6DD88 AC004486.1-201ENST00000546846 233 ntBASIC3.06□□□□□ -1.92
ATL3Q6DD88 AC123904.3-201ENST00000547218 814 ntBASIC3.06□□□□□ -1.92
ATL3Q6DD88 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.06□□□□□ -1.92
ATL3Q6DD88 AP005205.1-201ENST00000563503 508 ntBASIC3.06□□□□□ -1.92
ATL3Q6DD88 MIR5092-201ENST00000583139 88 ntBASIC3.06□□□□□ -1.92
ATL3Q6DD88 SRGNP1-201ENST00000603392 451 ntBASIC3.06□□□□□ -1.92
ATL3Q6DD88 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.06□□□□□ -1.92
ATL3Q6DD88 AC112220.2-201ENST00000605513 533 ntBASIC3.06□□□□□ -1.92
ATL3Q6DD88 AC093732.2-201ENST00000607950 274 ntBASIC3.06□□□□□ -1.92
ATL3Q6DD88 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.06□□□□□ -1.92
ATL3Q6DD88 AL138478.1-201ENST00000612252 832 ntBASIC3.06□□□□□ -1.92
ATL3Q6DD88 AC023158.2-201ENST00000614876 543 ntBASIC3.06□□□□□ -1.92
ATL3Q6DD88 AC009269.6-201ENST00000621778 588 ntBASIC3.06□□□□□ -1.92
ATL3Q6DD88 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.06□□□□□ -1.92
ATL3Q6DD88 AL161431.1-201ENST00000618966 4205 ntBASIC3.06□□□□□ -1.92
ATL3Q6DD88 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.06□□□□□ -1.92
ATL3Q6DD88 CUL1P1-201ENST00000509510 2425 ntBASIC3.05□□□□□ -1.92
ATL3Q6DD88 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.05□□□□□ -1.92
ATL3Q6DD88 MTCO1P23-201ENST00000415223 1526 ntBASIC3.05□□□□□ -1.92
ATL3Q6DD88 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
ATL3Q6DD88 RNU6-173P-201ENST00000364215 104 ntBASIC3.05□□□□□ -1.92
ATL3Q6DD88 snoZ40.1-201ENST00000364540 72 ntBASIC3.05□□□□□ -1.92
ATL3Q6DD88 RNU6-224P-201ENST00000384055 107 ntBASIC3.05□□□□□ -1.92
ATL3Q6DD88 RNU6-878P-201ENST00000384578 110 ntBASIC3.05□□□□□ -1.92
ATL3Q6DD88 MIR506-201ENST00000384998 124 ntBASIC3.05□□□□□ -1.92
ATL3Q6DD88 AL450338.1-201ENST00000407987 512 ntBASIC3.05□□□□□ -1.92
ATL3Q6DD88 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.05□□□□□ -1.92
ATL3Q6DD88 RPS15AP38-201ENST00000413110 372 ntBASIC3.05□□□□□ -1.92
ATL3Q6DD88 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.05□□□□□ -1.92
ATL3Q6DD88 USP9YP36-201ENST00000424581 829 ntBASIC3.05□□□□□ -1.92
ATL3Q6DD88 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.05□□□□□ -1.92
ATL3Q6DD88 MTATP6P4-201ENST00000427725 675 ntBASIC3.05□□□□□ -1.92
ATL3Q6DD88 AC006946.1-201ENST00000429106 328 ntBASIC3.05□□□□□ -1.92
ATL3Q6DD88 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.05□□□□□ -1.92
ATL3Q6DD88 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.05□□□□□ -1.92
ATL3Q6DD88 AL671855.1-201ENST00000446875 1203 ntBASIC3.05□□□□□ -1.92
ATL3Q6DD88 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.05□□□□□ -1.92
ATL3Q6DD88 SRIP1-201ENST00000489235 288 ntBASIC3.05□□□□□ -1.92
ATL3Q6DD88 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.05□□□□□ -1.92
ATL3Q6DD88 AC006390.1-201ENST00000508068 283 ntBASIC3.05□□□□□ -1.92
ATL3Q6DD88 SNORA31.1-201ENST00000515993 133 ntBASIC3.05□□□□□ -1.92
ATL3Q6DD88 RNU6-27P-201ENST00000516146 107 ntBASIC3.05□□□□□ -1.92
ATL3Q6DD88 SNORA31.5-201ENST00000516190 133 ntBASIC3.05□□□□□ -1.92
ATL3Q6DD88 AC022690.1-201ENST00000526681 550 ntBASIC3.05□□□□□ -1.92
ATL3Q6DD88 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.05□□□□□ -1.92
ATL3Q6DD88 OR5BN1P-201ENST00000532955 829 ntBASIC3.05□□□□□ -1.92
ATL3Q6DD88 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.05□□□□□ -1.92
ATL3Q6DD88 YWHAZP1-201ENST00000556286 722 ntBASIC3.05□□□□□ -1.92
ATL3Q6DD88 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.05□□□□□ -1.92
ATL3Q6DD88 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.05□□□□□ -1.92
ATL3Q6DD88 FAM60BP-201ENST00000578364 658 ntBASIC3.05□□□□□ -1.92
ATL3Q6DD88 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms