Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC126182.1-201ENST00000478134 357 ntBASIC4.12□□□□□ -1.75
RNF220Q5VTB9 RPS3AP14-201ENST00000483907 780 ntBASIC4.12□□□□□ -1.75
RNF220Q5VTB9 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.12□□□□□ -1.75
RNF220Q5VTB9 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RNF220Q5VTB9 AL359273.1-201ENST00000510918 627 ntBASIC4.12□□□□□ -1.75
RNF220Q5VTB9 OR7H2P-201ENST00000513483 306 ntBASIC4.12□□□□□ -1.75
RNF220Q5VTB9 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.12□□□□□ -1.75
RNF220Q5VTB9 HMGB1P41-201ENST00000520234 440 ntBASIC4.12□□□□□ -1.75
RNF220Q5VTB9 OR5G4P-201ENST00000525251 760 ntBASIC4.12□□□□□ -1.75
RNF220Q5VTB9 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.12□□□□□ -1.75
RNF220Q5VTB9 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RNF220Q5VTB9 AC135001.1-201ENST00000544546 283 ntBASIC4.12□□□□□ -1.75
RNF220Q5VTB9 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.12□□□□□ -1.75
RNF220Q5VTB9 AL352979.3-201ENST00000553515 247 ntBASIC4.12□□□□□ -1.75
RNF220Q5VTB9 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.12□□□□□ -1.75
RNF220Q5VTB9 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.12□□□□□ -1.75
RNF220Q5VTB9 RPL23AP84-201ENST00000571193 464 ntBASIC4.12□□□□□ -1.75
RNF220Q5VTB9 MIR4436B2-201ENST00000581415 91 ntBASIC4.12□□□□□ -1.75
RNF220Q5VTB9 MIR4436B1-201ENST00000583272 91 ntBASIC4.12□□□□□ -1.75
RNF220Q5VTB9 AC107304.1-201ENST00000604229 296 ntBASIC4.12□□□□□ -1.75
RNF220Q5VTB9 AF250324.2-201ENST00000608299 610 ntBASIC4.12□□□□□ -1.75
RNF220Q5VTB9 FAM25E-202ENST00000608562 189 ntBASIC4.12□□□□□ -1.75
RNF220Q5VTB9 AC004825.2-201ENST00000616634 455 ntBASIC4.12□□□□□ -1.75
RNF220Q5VTB9 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.12□□□□□ -1.75
RNF220Q5VTB9 AC007546.2-201ENST00000623996 360 ntBASIC4.12□□□□□ -1.75
RNF220Q5VTB9 CR381653.2-201ENST00000624041 768 ntBASIC4.12□□□□□ -1.75
RNF220Q5VTB9 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.12□□□□□ -1.75
RNF220Q5VTB9 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.12□□□□□ -1.75
RNF220Q5VTB9 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.12□□□□□ -1.75
RNF220Q5VTB9 SDAD1P2-201ENST00000441308 2028 ntBASIC4.12□□□□□ -1.75
RNF220Q5VTB9 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.12□□□□□ -1.75
RNF220Q5VTB9 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
RNF220Q5VTB9 GABPAP-201ENST00000419271 1356 ntBASIC4.12□□□□□ -1.75
RNF220Q5VTB9 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.12□□□□□ -1.75
RNF220Q5VTB9 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF220Q5VTB9 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF220Q5VTB9 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF220Q5VTB9 TNPO1P3-201ENST00000436471 2662 ntBASIC4.11□□□□□ -1.75
RNF220Q5VTB9 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF220Q5VTB9 MFSD8-242ENST00000641690 4199 ntBASIC4.11□□□□□ -1.75
RNF220Q5VTB9 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RNF220Q5VTB9 RNU6-50P-201ENST00000362356 103 ntBASIC4.11□□□□□ -1.75
RNF220Q5VTB9 RNU6-39P-201ENST00000384344 107 ntBASIC4.11□□□□□ -1.75
RNF220Q5VTB9 MIR558-201ENST00000384920 94 ntBASIC4.11□□□□□ -1.75
RNF220Q5VTB9 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
RNF220Q5VTB9 RPL17P50-201ENST00000396131 546 ntBASIC4.11□□□□□ -1.75
RNF220Q5VTB9 SNORA3C-201ENST00000408792 125 ntBASIC4.11□□□□□ -1.75
RNF220Q5VTB9 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.11□□□□□ -1.75
RNF220Q5VTB9 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.11□□□□□ -1.75
RNF220Q5VTB9 CRYBB2P1-203ENST00000415709 538 ntBASIC4.11□□□□□ -1.75
RNF220Q5VTB9 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF220Q5VTB9 RPS12P10-201ENST00000427031 377 ntBASIC4.11□□□□□ -1.75
RNF220Q5VTB9 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF220Q5VTB9 RPL7L1P10-201ENST00000427790 463 ntBASIC4.11□□□□□ -1.75
RNF220Q5VTB9 MED13P1-201ENST00000428342 171 ntBASIC4.11□□□□□ -1.75
RNF220Q5VTB9 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF220Q5VTB9 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF220Q5VTB9 RPL23AP43-201ENST00000446445 471 ntBASIC4.11□□□□□ -1.75
RNF220Q5VTB9 GAPDHP27-201ENST00000447427 1020 ntBASIC4.11□□□□□ -1.75
RNF220Q5VTB9 AL162591.2-201ENST00000449634 317 ntBASIC4.11□□□□□ -1.75
RNF220Q5VTB9 ABCF2P2-201ENST00000450549 296 ntBASIC4.11□□□□□ -1.75
RNF220Q5VTB9 AC022364.2-201ENST00000457963 554 ntBASIC4.11□□□□□ -1.75
RNF220Q5VTB9 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.11□□□□□ -1.75
RNF220Q5VTB9 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF220Q5VTB9 RPL35P6-201ENST00000490024 372 ntBASIC4.11□□□□□ -1.75
RNF220Q5VTB9 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF220Q5VTB9 AP001893.2-201ENST00000526949 202 ntBASIC4.11□□□□□ -1.75
RNF220Q5VTB9 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF220Q5VTB9 TPRKBP2-201ENST00000565969 475 ntBASIC4.11□□□□□ -1.75
RNF220Q5VTB9 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF220Q5VTB9 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF220Q5VTB9 BDH2P1-201ENST00000602288 736 ntBASIC4.11□□□□□ -1.75
RNF220Q5VTB9 AL670379.6-201ENST00000603753 252 ntBASIC4.11□□□□□ -1.75
RNF220Q5VTB9 AL670379.11-201ENST00000604059 253 ntBASIC4.11□□□□□ -1.75
RNF220Q5VTB9 AC008162.1-201ENST00000604718 254 ntBASIC4.11□□□□□ -1.75
RNF220Q5VTB9 AL670379.1-201ENST00000604752 252 ntBASIC4.11□□□□□ -1.75
RNF220Q5VTB9 AL670379.5-201ENST00000605253 252 ntBASIC4.11□□□□□ -1.75
RNF220Q5VTB9 AL670379.12-201ENST00000605291 253 ntBASIC4.11□□□□□ -1.75
RNF220Q5VTB9 AL670379.8-201ENST00000605353 252 ntBASIC4.11□□□□□ -1.75
RNF220Q5VTB9 AL670379.7-201ENST00000605823 252 ntBASIC4.11□□□□□ -1.75
RNF220Q5VTB9 AP002360.4-201ENST00000606980 481 ntBASIC4.11□□□□□ -1.75
RNF220Q5VTB9 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF220Q5VTB9 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.11□□□□□ -1.75
RNF220Q5VTB9 AL359880.1-201ENST00000621879 266 ntBASIC4.11□□□□□ -1.75
RNF220Q5VTB9 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF220Q5VTB9 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
RNF220Q5VTB9 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF220Q5VTB9 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF220Q5VTB9 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF220Q5VTB9 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
RNF220Q5VTB9 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RNF220Q5VTB9 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.1□□□□□ -1.75
RNF220Q5VTB9 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RNF220Q5VTB9 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.1□□□□□ -1.75
RNF220Q5VTB9 AC027290.2-201ENST00000623210 18662 ntBASIC4.1□□□□□ -1.75
RNF220Q5VTB9 OR4K15-201ENST00000305051 1216 ntBASIC4.1□□□□□ -1.75
RNF220Q5VTB9 AC073343.1-201ENST00000328239 651 ntBASIC4.1□□□□□ -1.75
RNF220Q5VTB9 SNORA70F-201ENST00000384142 135 ntBASIC4.1□□□□□ -1.75
RNF220Q5VTB9 MIR659-201ENST00000384963 97 ntBASIC4.1□□□□□ -1.75
RNF220Q5VTB9 MIR550A3-201ENST00000390735 95 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms