Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 SNRPGP6-201ENST00000451124 220 ntBASIC4.96□□□□□ -1.62
SSRP1Q08945 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.96□□□□□ -1.62
SSRP1Q08945 AC011276.1-201ENST00000469688 323 ntBASIC4.96□□□□□ -1.62
SSRP1Q08945 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
SSRP1Q08945 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.96□□□□□ -1.62
SSRP1Q08945 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.96□□□□□ -1.62
SSRP1Q08945 AC018710.1-201ENST00000506509 158 ntBASIC4.96□□□□□ -1.62
SSRP1Q08945 AC108475.1-201ENST00000507880 950 ntBASIC4.96□□□□□ -1.62
SSRP1Q08945 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.96□□□□□ -1.62
SSRP1Q08945 HMGB1P41-201ENST00000520234 440 ntBASIC4.96□□□□□ -1.62
SSRP1Q08945 FAM60DP-201ENST00000524174 632 ntBASIC4.96□□□□□ -1.62
SSRP1Q08945 OR5BN1P-201ENST00000532955 829 ntBASIC4.96□□□□□ -1.62
SSRP1Q08945 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.96□□□□□ -1.62
SSRP1Q08945 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.96□□□□□ -1.62
SSRP1Q08945 MTND6P33-201ENST00000571794 183 ntBASIC4.96□□□□□ -1.62
SSRP1Q08945 AL121992.2-201ENST00000606262 256 ntBASIC4.96□□□□□ -1.62
SSRP1Q08945 AC024940.5-201ENST00000622889 474 ntBASIC4.96□□□□□ -1.62
SSRP1Q08945 AL445363.3-201ENST00000623080 671 ntBASIC4.96□□□□□ -1.62
SSRP1Q08945 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.96□□□□□ -1.62
SSRP1Q08945 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.96□□□□□ -1.62
SSRP1Q08945 AC008013.2-202ENST00000637965 364 ntBASIC4.96□□□□□ -1.62
SSRP1Q08945 AC090337.1-201ENST00000579651 2074 ntBASIC4.96□□□□□ -1.62
SSRP1Q08945 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SSRP1Q08945 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SSRP1Q08945 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SSRP1Q08945 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
SSRP1Q08945 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.95□□□□□ -1.62
SSRP1Q08945 DDX10P1-201ENST00000448545 1933 ntBASIC4.95□□□□□ -1.62
SSRP1Q08945 AL592182.3-201ENST00000642132 3304 ntBASIC4.95□□□□□ -1.62
SSRP1Q08945 AC027290.2-201ENST00000623210 18662 ntBASIC4.95□□□□□ -1.62
SSRP1Q08945 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.95□□□□□ -1.62
SSRP1Q08945 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSRP1Q08945 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSRP1Q08945 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSRP1Q08945 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
SSRP1Q08945 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SSRP1Q08945 Y_RNA.70-201ENST00000362886 110 ntBASIC4.95□□□□□ -1.62
SSRP1Q08945 Y_RNA.160-201ENST00000363677 92 ntBASIC4.95□□□□□ -1.62
SSRP1Q08945 AL591416.1-201ENST00000404015 867 ntBASIC4.95□□□□□ -1.62
SSRP1Q08945 OR9R1P-201ENST00000412200 877 ntBASIC4.95□□□□□ -1.62
SSRP1Q08945 AC011933.1-201ENST00000413334 321 ntBASIC4.95□□□□□ -1.62
SSRP1Q08945 UBE2FP1-201ENST00000416536 447 ntBASIC4.95□□□□□ -1.62
SSRP1Q08945 RPL21P111-201ENST00000418453 477 ntBASIC4.95□□□□□ -1.62
SSRP1Q08945 AC099677.1-201ENST00000420575 175 ntBASIC4.95□□□□□ -1.62
SSRP1Q08945 AC092017.2-201ENST00000427600 362 ntBASIC4.95□□□□□ -1.62
SSRP1Q08945 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.95□□□□□ -1.62
SSRP1Q08945 AL121871.1-201ENST00000443413 436 ntBASIC4.95□□□□□ -1.62
SSRP1Q08945 RPL21P133-201ENST00000443666 476 ntBASIC4.95□□□□□ -1.62
SSRP1Q08945 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.95□□□□□ -1.62
SSRP1Q08945 AC116533.1-201ENST00000459748 321 ntBASIC4.95□□□□□ -1.62
SSRP1Q08945 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.95□□□□□ -1.62
SSRP1Q08945 AC233702.1-201ENST00000482905 502 ntBASIC4.95□□□□□ -1.62
SSRP1Q08945 PCBP2P3-201ENST00000509726 843 ntBASIC4.95□□□□□ -1.62
SSRP1Q08945 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.95□□□□□ -1.62
SSRP1Q08945 AC114781.4-201ENST00000513707 639 ntBASIC4.95□□□□□ -1.62
SSRP1Q08945 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.95□□□□□ -1.62
SSRP1Q08945 RNA5SP73-201ENST00000516744 108 ntBASIC4.95□□□□□ -1.62
SSRP1Q08945 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.95□□□□□ -1.62
SSRP1Q08945 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.95□□□□□ -1.62
SSRP1Q08945 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.95□□□□□ -1.62
SSRP1Q08945 ARL2BPP2-201ENST00000550907 489 ntBASIC4.95□□□□□ -1.62
SSRP1Q08945 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.95□□□□□ -1.62
SSRP1Q08945 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSRP1Q08945 MIR4277-201ENST00000578298 84 ntBASIC4.95□□□□□ -1.62
SSRP1Q08945 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.95□□□□□ -1.62
SSRP1Q08945 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSRP1Q08945 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.95□□□□□ -1.62
SSRP1Q08945 AC091135.1-201ENST00000585943 307 ntBASIC4.95□□□□□ -1.62
SSRP1Q08945 BNIP3P9-201ENST00000603714 553 ntBASIC4.95□□□□□ -1.62
SSRP1Q08945 AL035413.2-201ENST00000604801 525 ntBASIC4.95□□□□□ -1.62
SSRP1Q08945 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.95□□□□□ -1.62
SSRP1Q08945 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.95□□□□□ -1.62
SSRP1Q08945 DISC2.1-201ENST00000612827 205 ntBASIC4.95□□□□□ -1.62
SSRP1Q08945 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.95□□□□□ -1.62
SSRP1Q08945 AL354950.2-201ENST00000617939 290 ntBASIC4.95□□□□□ -1.62
SSRP1Q08945 FRG1KP-201ENST00000623592 341 ntBASIC4.95□□□□□ -1.62
SSRP1Q08945 AC024614.3-201ENST00000637860 256 ntBASIC4.95□□□□□ -1.62
SSRP1Q08945 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSRP1Q08945 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSRP1Q08945 NOL8P1-201ENST00000508336 3529 ntBASIC4.95□□□□□ -1.62
SSRP1Q08945 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSRP1Q08945 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSRP1Q08945 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
SSRP1Q08945 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
SSRP1Q08945 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SSRP1Q08945 AL645937.1-201ENST00000641739 1652 ntBASIC4.94□□□□□ -1.62
SSRP1Q08945 RNU1-108P-201ENST00000362556 161 ntBASIC4.94□□□□□ -1.62
SSRP1Q08945 RNU1-14P-201ENST00000362759 152 ntBASIC4.94□□□□□ -1.62
SSRP1Q08945 RNU1-32P-201ENST00000363937 159 ntBASIC4.94□□□□□ -1.62
SSRP1Q08945 RNA5SP509-201ENST00000364577 119 ntBASIC4.94□□□□□ -1.62
SSRP1Q08945 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SSRP1Q08945 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.94□□□□□ -1.62
SSRP1Q08945 RNU6-641P-201ENST00000384006 107 ntBASIC4.94□□□□□ -1.62
SSRP1Q08945 MIR454-201ENST00000390180 115 ntBASIC4.94□□□□□ -1.62
SSRP1Q08945 RNU2-36P-201ENST00000410361 191 ntBASIC4.94□□□□□ -1.62
SSRP1Q08945 RNU2-39P-201ENST00000410604 198 ntBASIC4.94□□□□□ -1.62
SSRP1Q08945 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.94□□□□□ -1.62
SSRP1Q08945 SDCBPP3-201ENST00000419629 891 ntBASIC4.94□□□□□ -1.62
SSRP1Q08945 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SSRP1Q08945 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 152.1 ms