Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
YBX1P67809 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.71□□□□□ -1.65
YBX1P67809 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
YBX1P67809 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
YBX1P67809 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
YBX1P67809 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
YBX1P67809 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
YBX1P67809 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
YBX1P67809 RNU6-1115P-201ENST00000362490 106 ntBASIC4.71□□□□□ -1.66
YBX1P67809 SNORA63.7-201ENST00000365579 123 ntBASIC4.71□□□□□ -1.66
YBX1P67809 MIR23A-201ENST00000385245 73 ntBASIC4.71□□□□□ -1.66
YBX1P67809 AC018865.2-201ENST00000423631 129 ntBASIC4.71□□□□□ -1.66
YBX1P67809 AL031736.2-201ENST00000426573 787 ntBASIC4.71□□□□□ -1.66
YBX1P67809 AL049745.1-201ENST00000433953 286 ntBASIC4.71□□□□□ -1.66
YBX1P67809 RPL12P46-201ENST00000436610 195 ntBASIC4.71□□□□□ -1.66
YBX1P67809 TDGF1P1-201ENST00000445734 527 ntBASIC4.71□□□□□ -1.66
YBX1P67809 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.71□□□□□ -1.66
YBX1P67809 AL031584.1-201ENST00000447169 754 ntBASIC4.71□□□□□ -1.66
YBX1P67809 RPL7L1P1-201ENST00000448259 785 ntBASIC4.71□□□□□ -1.66
YBX1P67809 MTND1P17-201ENST00000448961 204 ntBASIC4.71□□□□□ -1.66
YBX1P67809 AL591623.2-201ENST00000449978 222 ntBASIC4.71□□□□□ -1.66
YBX1P67809 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.71□□□□□ -1.66
YBX1P67809 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.71□□□□□ -1.66
YBX1P67809 AC010683.1-201ENST00000473673 378 ntBASIC4.71□□□□□ -1.66
YBX1P67809 AC015911.1-201ENST00000495111 156 ntBASIC4.71□□□□□ -1.66
YBX1P67809 OR7H2P-201ENST00000513483 306 ntBASIC4.71□□□□□ -1.66
YBX1P67809 RFPL4AP5-201ENST00000514977 504 ntBASIC4.71□□□□□ -1.66
YBX1P67809 AC104057.1-201ENST00000515547 497 ntBASIC4.71□□□□□ -1.66
YBX1P67809 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.71□□□□□ -1.66
YBX1P67809 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.71□□□□□ -1.66
YBX1P67809 AL137161.1-201ENST00000532231 390 ntBASIC4.71□□□□□ -1.66
YBX1P67809 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.71□□□□□ -1.66
YBX1P67809 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.71□□□□□ -1.66
YBX1P67809 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.71□□□□□ -1.66
YBX1P67809 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.71□□□□□ -1.66
YBX1P67809 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.71□□□□□ -1.66
YBX1P67809 BNIP3P16-201ENST00000589779 534 ntBASIC4.71□□□□□ -1.66
YBX1P67809 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.71□□□□□ -1.66
YBX1P67809 AL031320.1-201ENST00000604177 357 ntBASIC4.71□□□□□ -1.66
YBX1P67809 AC019206.1-201ENST00000621938 425 ntBASIC4.71□□□□□ -1.66
YBX1P67809 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.71□□□□□ -1.66
YBX1P67809 AC008013.2-202ENST00000637965 364 ntBASIC4.71□□□□□ -1.66
YBX1P67809 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
YBX1P67809 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
YBX1P67809 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.71□□□□□ -1.66
YBX1P67809 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
YBX1P67809 AC008079.2-201ENST00000623543 20396 ntBASIC4.71□□□□□ -1.66
YBX1P67809 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
YBX1P67809 AL138713.1-201ENST00000624026 2130 ntBASIC4.7□□□□□ -1.66
YBX1P67809 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.7□□□□□ -1.66
YBX1P67809 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.7□□□□□ -1.66
YBX1P67809 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
YBX1P67809 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
YBX1P67809 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
YBX1P67809 AC008758.3-201ENST00000507003 1829 ntBASIC4.7□□□□□ -1.66
YBX1P67809 AC090971.4-201ENST00000560291 1800 ntBASIC4.7□□□□□ -1.66
YBX1P67809 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.7□□□□□ -1.66
YBX1P67809 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
YBX1P67809 AL138820.1-201ENST00000617901 5305 ntBASIC4.7□□□□□ -1.66
YBX1P67809 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.7□□□□□ -1.66
YBX1P67809 RNU6-1287P-201ENST00000362914 107 ntBASIC4.7□□□□□ -1.66
YBX1P67809 RNU6-511P-201ENST00000363496 107 ntBASIC4.7□□□□□ -1.66
YBX1P67809 RNU6-26P-201ENST00000383985 107 ntBASIC4.7□□□□□ -1.66
YBX1P67809 RNU6-1060P-201ENST00000384664 107 ntBASIC4.7□□□□□ -1.66
YBX1P67809 EIF4E2P1-201ENST00000393781 255 ntBASIC4.7□□□□□ -1.66
YBX1P67809 POLHP1-201ENST00000411806 470 ntBASIC4.7□□□□□ -1.66
YBX1P67809 COX6B1P1-201ENST00000415962 213 ntBASIC4.7□□□□□ -1.66
YBX1P67809 AL645608.4-201ENST00000423619 154 ntBASIC4.7□□□□□ -1.66
YBX1P67809 RAC1P6-201ENST00000423911 575 ntBASIC4.7□□□□□ -1.66
YBX1P67809 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.7□□□□□ -1.66
YBX1P67809 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.7□□□□□ -1.66
YBX1P67809 AL451139.1-201ENST00000434718 346 ntBASIC4.7□□□□□ -1.66
YBX1P67809 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.7□□□□□ -1.66
YBX1P67809 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.7□□□□□ -1.66
YBX1P67809 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.7□□□□□ -1.66
YBX1P67809 AL445433.1-201ENST00000457507 257 ntBASIC4.7□□□□□ -1.66
YBX1P67809 AC091153.1-201ENST00000466297 402 ntBASIC4.7□□□□□ -1.66
YBX1P67809 RN7SL481P-201ENST00000477764 299 ntBASIC4.7□□□□□ -1.66
YBX1P67809 AF213884.1-201ENST00000488102 463 ntBASIC4.7□□□□□ -1.66
YBX1P67809 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.7□□□□□ -1.66
YBX1P67809 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.7□□□□□ -1.66
YBX1P67809 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.7□□□□□ -1.66
YBX1P67809 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.7□□□□□ -1.66
YBX1P67809 AC093249.4-201ENST00000564755 259 ntBASIC4.7□□□□□ -1.66
YBX1P67809 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.7□□□□□ -1.66
YBX1P67809 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.7□□□□□ -1.66
YBX1P67809 FAM25E-202ENST00000608562 189 ntBASIC4.7□□□□□ -1.66
YBX1P67809 uc_338.18-201ENST00000615451 175 ntBASIC4.7□□□□□ -1.66
YBX1P67809 HMGB1P24-202ENST00000615653 685 ntBASIC4.7□□□□□ -1.66
YBX1P67809 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
YBX1P67809 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
YBX1P67809 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
YBX1P67809 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
YBX1P67809 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
YBX1P67809 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
YBX1P67809 CDC27P3-201ENST00000635418 1910 ntBASIC4.7□□□□□ -1.66
YBX1P67809 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
YBX1P67809 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
YBX1P67809 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
YBX1P67809 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms