Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC126177.3-201ENST00000551839 688 ntBASIC1.01□□□□□ -2.25
RPL39P62891 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.01□□□□□ -2.25
RPL39P62891 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
RPL39P62891 AC067852.4-201ENST00000590314 478 ntBASIC1.01□□□□□ -2.25
RPL39P62891 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.01□□□□□ -2.25
RPL39P62891 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.01□□□□□ -2.25
RPL39P62891 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.01□□□□□ -2.25
RPL39P62891 AC010678.1-201ENST00000614118 713 ntBASIC1.01□□□□□ -2.25
RPL39P62891 AL110115.1-201ENST00000614396 364 ntBASIC1.01□□□□□ -2.25
RPL39P62891 AC245389.2-201ENST00000616023 576 ntBASIC1.01□□□□□ -2.25
RPL39P62891 AC242843.1-201ENST00000618702 573 ntBASIC1.01□□□□□ -2.25
RPL39P62891 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC1.01□□□□□ -2.25
RPL39P62891 AC010149.2-201ENST00000637608 315 ntBASIC1.01□□□□□ -2.25
RPL39P62891 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
RPL39P62891 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC1.01□□□□□ -2.25
RPL39P62891 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.01□□□□□ -2.25
RPL39P62891 MIR517C-201ENST00000385103 95 ntBASIC1□□□□□ -2.25
RPL39P62891 MIR607-201ENST00000385241 96 ntBASIC1□□□□□ -2.25
RPL39P62891 RNU4-26P-201ENST00000410270 107 ntBASIC1□□□□□ -2.25
RPL39P62891 RNA5SP80-201ENST00000410475 111 ntBASIC1□□□□□ -2.25
RPL39P62891 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC1□□□□□ -2.25
RPL39P62891 SNRPGP13-201ENST00000442212 177 ntBASIC1□□□□□ -2.25
RPL39P62891 snoU13.24-201ENST00000458998 104 ntBASIC1□□□□□ -2.25
RPL39P62891 MTCYBP35-201ENST00000503630 1137 ntBASIC1□□□□□ -2.25
RPL39P62891 SNORA26.10-201ENST00000516427 141 ntBASIC1□□□□□ -2.25
RPL39P62891 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1□□□□□ -2.25
RPL39P62891 RANP3-201ENST00000530970 276 ntBASIC1□□□□□ -2.25
RPL39P62891 AC068339.2-201ENST00000534395 618 ntBASIC1□□□□□ -2.25
RPL39P62891 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1□□□□□ -2.25
RPL39P62891 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC1□□□□□ -2.25
RPL39P62891 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1□□□□□ -2.25
RPL39P62891 AL354943.1-201ENST00000572103 781 ntBASIC1□□□□□ -2.25
RPL39P62891 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1□□□□□ -2.25
RPL39P62891 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1□□□□□ -2.25
RPL39P62891 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1□□□□□ -2.25
RPL39P62891 AC116096.1-201ENST00000566804 2314 ntBASIC1□□□□□ -2.25
RPL39P62891 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
RPL39P62891 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC0.99□□□□□ -2.25
RPL39P62891 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
RPL39P62891 RNU4-42P-201ENST00000364738 142 ntBASIC0.99□□□□□ -2.25
RPL39P62891 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
RPL39P62891 RSL24D1P4-201ENST00000400938 484 ntBASIC0.99□□□□□ -2.25
RPL39P62891 RPL5P19-201ENST00000404228 893 ntBASIC0.99□□□□□ -2.25
RPL39P62891 RNU6-955P-201ENST00000410497 104 ntBASIC0.99□□□□□ -2.25
RPL39P62891 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC0.99□□□□□ -2.25
RPL39P62891 AL513185.2-201ENST00000425543 193 ntBASIC0.99□□□□□ -2.25
RPL39P62891 HMGB1P18-201ENST00000438801 619 ntBASIC0.99□□□□□ -2.25
RPL39P62891 CASP3P1-201ENST00000446037 609 ntBASIC0.99□□□□□ -2.25
RPL39P62891 AC069306.1-201ENST00000507006 843 ntBASIC0.99□□□□□ -2.25
RPL39P62891 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
RPL39P62891 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC0.99□□□□□ -2.25
RPL39P62891 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC0.99□□□□□ -2.25
RPL39P62891 SNORA25.15-201ENST00000516487 89 ntBASIC0.99□□□□□ -2.25
RPL39P62891 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC0.99□□□□□ -2.25
RPL39P62891 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC0.99□□□□□ -2.25
RPL39P62891 AP000867.2-201ENST00000532468 320 ntBASIC0.99□□□□□ -2.25
RPL39P62891 CYCSP26-201ENST00000534107 320 ntBASIC0.99□□□□□ -2.25
RPL39P62891 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC0.99□□□□□ -2.25
RPL39P62891 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC0.99□□□□□ -2.25
RPL39P62891 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC0.99□□□□□ -2.25
RPL39P62891 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC0.99□□□□□ -2.25
RPL39P62891 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC0.99□□□□□ -2.25
RPL39P62891 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC0.99□□□□□ -2.25
RPL39P62891 MIR6845-201ENST00000613182 61 ntBASIC0.99□□□□□ -2.25
RPL39P62891 AC091834.1-201ENST00000614543 472 ntBASIC0.99□□□□□ -2.25
RPL39P62891 AC008083.4-201ENST00000615076 444 ntBASIC0.99□□□□□ -2.25
RPL39P62891 AK6-205ENST00000618980 483 ntTSL 2 BASIC0.99□□□□□ -2.25
RPL39P62891 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC0.99□□□□□ -2.25
RPL39P62891 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
RPL39P62891 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
RPL39P62891 AC007342.9-201ENST00000623877 1385 ntBASIC0.98□□□□□ -2.25
RPL39P62891 AC073055.1-201ENST00000456901 1621 ntBASIC0.98□□□□□ -2.25
RPL39P62891 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC0.98□□□□□ -2.25
RPL39P62891 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC0.98□□□□□ -2.25
RPL39P62891 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
RPL39P62891 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC0.98□□□□□ -2.25
RPL39P62891 AL512504.1-201ENST00000415494 778 ntBASIC0.98□□□□□ -2.25
RPL39P62891 EI24P1-201ENST00000416584 867 ntBASIC0.98□□□□□ -2.25
RPL39P62891 AL139413.1-201ENST00000421309 217 ntBASIC0.98□□□□□ -2.25
RPL39P62891 NAP1L4P3-201ENST00000432820 1147 ntBASIC0.98□□□□□ -2.25
RPL39P62891 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC0.98□□□□□ -2.25
RPL39P62891 RPS29P23-201ENST00000458635 123 ntBASIC0.98□□□□□ -2.25
RPL39P62891 AC078857.1-201ENST00000469870 667 ntBASIC0.98□□□□□ -2.25
RPL39P62891 RPS29P21-201ENST00000496272 170 ntBASIC0.98□□□□□ -2.25
RPL39P62891 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
RPL39P62891 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC0.98□□□□□ -2.25
RPL39P62891 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC0.98□□□□□ -2.25
RPL39P62891 RNA5SP471-201ENST00000516971 106 ntBASIC0.98□□□□□ -2.25
RPL39P62891 snoZ278.1-201ENST00000517059 112 ntBASIC0.98□□□□□ -2.25
RPL39P62891 AP005597.4-201ENST00000526762 229 ntBASIC0.98□□□□□ -2.25
RPL39P62891 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC0.98□□□□□ -2.25
RPL39P62891 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC0.98□□□□□ -2.25
RPL39P62891 YWHAZP1-201ENST00000556286 722 ntBASIC0.98□□□□□ -2.25
RPL39P62891 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC0.98□□□□□ -2.25
RPL39P62891 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC0.98□□□□□ -2.25
RPL39P62891 MIR4255-201ENST00000579351 72 ntBASIC0.98□□□□□ -2.25
RPL39P62891 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC0.98□□□□□ -2.25
RPL39P62891 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC0.98□□□□□ -2.25
RPL39P62891 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC0.98□□□□□ -2.25
RPL39P62891 AC010733.2-201ENST00000589496 5702 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms