Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PKNOX1P55347 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.82□□□□□ -1.96
PKNOX1P55347 MIR512-1-201ENST00000384913 84 ntBASIC2.82□□□□□ -1.96
PKNOX1P55347 MIR620-201ENST00000385232 95 ntBASIC2.82□□□□□ -1.96
PKNOX1P55347 AL590084.1-201ENST00000407885 387 ntBASIC2.82□□□□□ -1.96
PKNOX1P55347 VN1R51P-201ENST00000411675 945 ntBASIC2.82□□□□□ -1.96
PKNOX1P55347 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.82□□□□□ -1.96
PKNOX1P55347 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.82□□□□□ -1.96
PKNOX1P55347 MTATP6P4-201ENST00000427725 675 ntBASIC2.82□□□□□ -1.96
PKNOX1P55347 MTCYBP45-201ENST00000435243 565 ntBASIC2.82□□□□□ -1.96
PKNOX1P55347 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.82□□□□□ -1.96
PKNOX1P55347 MUPP-201ENST00000438111 566 ntBASIC2.82□□□□□ -1.96
PKNOX1P55347 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.82□□□□□ -1.96
PKNOX1P55347 RPL18AP17-201ENST00000455326 198 ntBASIC2.82□□□□□ -1.96
PKNOX1P55347 RPL23AP11-201ENST00000475260 469 ntBASIC2.82□□□□□ -1.96
PKNOX1P55347 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PKNOX1P55347 RN7SL504P-201ENST00000494496 287 ntBASIC2.82□□□□□ -1.96
PKNOX1P55347 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.82□□□□□ -1.96
PKNOX1P55347 AC114322.1-201ENST00000506771 926 ntBASIC2.82□□□□□ -1.96
PKNOX1P55347 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.82□□□□□ -1.96
PKNOX1P55347 RNY4P37-201ENST00000516225 96 ntBASIC2.82□□□□□ -1.96
PKNOX1P55347 ERHP1-201ENST00000523006 310 ntBASIC2.82□□□□□ -1.96
PKNOX1P55347 AC021451.1-201ENST00000523498 1129 ntBASIC2.82□□□□□ -1.96
PKNOX1P55347 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.82□□□□□ -1.96
PKNOX1P55347 CR383656.7-201ENST00000548164 174 ntBASIC2.82□□□□□ -1.96
PKNOX1P55347 MIR3908-201ENST00000579798 126 ntBASIC2.82□□□□□ -1.96
PKNOX1P55347 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.82□□□□□ -1.96
PKNOX1P55347 AC015871.2-201ENST00000603605 948 ntBASIC2.82□□□□□ -1.96
PKNOX1P55347 AL627309.6-201ENST00000606857 840 ntBASIC2.82□□□□□ -1.96
PKNOX1P55347 AC009570.1-201ENST00000609599 745 ntBASIC2.82□□□□□ -1.96
PKNOX1P55347 AC022509.4-201ENST00000621404 572 ntBASIC2.82□□□□□ -1.96
PKNOX1P55347 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.82□□□□□ -1.96
PKNOX1P55347 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PKNOX1P55347 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PKNOX1P55347 AC097714.1-201ENST00000511272 1647 ntBASIC2.82□□□□□ -1.96
PKNOX1P55347 AC096644.4-201ENST00000563417 2912 ntBASIC2.82□□□□□ -1.96
PKNOX1P55347 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PKNOX1P55347 CUL1P1-201ENST00000509510 2425 ntBASIC2.81□□□□□ -1.96
PKNOX1P55347 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
PKNOX1P55347 RNU6-882P-201ENST00000391025 103 ntBASIC2.81□□□□□ -1.96
PKNOX1P55347 AL592310.1-201ENST00000414330 671 ntBASIC2.81□□□□□ -1.96
PKNOX1P55347 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.81□□□□□ -1.96
PKNOX1P55347 AL137014.1-201ENST00000420490 1226 ntBASIC2.81□□□□□ -1.96
PKNOX1P55347 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.81□□□□□ -1.96
PKNOX1P55347 AC109583.1-201ENST00000432156 268 ntBASIC2.81□□□□□ -1.96
PKNOX1P55347 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
PKNOX1P55347 AC004866.2-201ENST00000438285 481 ntBASIC2.81□□□□□ -1.96
PKNOX1P55347 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.81□□□□□ -1.96
PKNOX1P55347 VN1R34P-201ENST00000447387 883 ntBASIC2.81□□□□□ -1.96
PKNOX1P55347 AL589880.1-201ENST00000448271 287 ntBASIC2.81□□□□□ -1.96
PKNOX1P55347 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.81□□□□□ -1.96
PKNOX1P55347 GSTA11P-201ENST00000452866 669 ntBASIC2.81□□□□□ -1.96
PKNOX1P55347 PRSS3P4-201ENST00000453323 162 ntBASIC2.81□□□□□ -1.96
PKNOX1P55347 RN7SL499P-201ENST00000481141 276 ntBASIC2.81□□□□□ -1.96
PKNOX1P55347 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.81□□□□□ -1.96
PKNOX1P55347 AC006445.1-201ENST00000491925 405 ntBASIC2.81□□□□□ -1.96
PKNOX1P55347 RPL21P131-201ENST00000497298 483 ntBASIC2.81□□□□□ -1.96
PKNOX1P55347 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.81□□□□□ -1.96
PKNOX1P55347 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.81□□□□□ -1.96
PKNOX1P55347 AC006499.2-201ENST00000513470 337 ntBASIC2.81□□□□□ -1.96
PKNOX1P55347 GMPSP1-201ENST00000514075 579 ntBASIC2.81□□□□□ -1.96
PKNOX1P55347 RNU6-583P-201ENST00000516012 92 ntBASIC2.81□□□□□ -1.96
PKNOX1P55347 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.81□□□□□ -1.96
PKNOX1P55347 AP000857.1-201ENST00000532151 543 ntBASIC2.81□□□□□ -1.96
PKNOX1P55347 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.81□□□□□ -1.96
PKNOX1P55347 SETP2-201ENST00000553886 926 ntBASIC2.81□□□□□ -1.96
PKNOX1P55347 AADACP1-206ENST00000561502 1193 ntBASIC2.81□□□□□ -1.96
PKNOX1P55347 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.81□□□□□ -1.96
PKNOX1P55347 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.81□□□□□ -1.96
PKNOX1P55347 BNIP3P11-201ENST00000603878 563 ntBASIC2.81□□□□□ -1.96
PKNOX1P55347 AC012443.1-201ENST00000605605 231 ntBASIC2.81□□□□□ -1.96
PKNOX1P55347 AC097504.2-201ENST00000608088 454 ntBASIC2.81□□□□□ -1.96
PKNOX1P55347 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.81□□□□□ -1.96
PKNOX1P55347 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
PKNOX1P55347 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.8□□□□□ -1.96
PKNOX1P55347 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.8□□□□□ -1.96
PKNOX1P55347 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
PKNOX1P55347 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PKNOX1P55347 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
PKNOX1P55347 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
PKNOX1P55347 RNU6-173P-201ENST00000364215 104 ntBASIC2.8□□□□□ -1.96
PKNOX1P55347 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.8□□□□□ -1.96
PKNOX1P55347 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
PKNOX1P55347 RNU6-851P-201ENST00000384565 107 ntBASIC2.8□□□□□ -1.96
PKNOX1P55347 RPL21P75-201ENST00000396599 483 ntBASIC2.8□□□□□ -1.96
PKNOX1P55347 RPL21P28-201ENST00000401418 483 ntBASIC2.8□□□□□ -1.96
PKNOX1P55347 HMGB1P17-201ENST00000403495 628 ntBASIC2.8□□□□□ -1.96
PKNOX1P55347 AL592114.1-201ENST00000403842 483 ntBASIC2.8□□□□□ -1.96
PKNOX1P55347 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.8□□□□□ -1.96
PKNOX1P55347 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.8□□□□□ -1.96
PKNOX1P55347 OR10R1P-201ENST00000441524 1141 ntBASIC2.8□□□□□ -1.96
PKNOX1P55347 RPL21P133-201ENST00000443666 476 ntBASIC2.8□□□□□ -1.96
PKNOX1P55347 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.8□□□□□ -1.96
PKNOX1P55347 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.8□□□□□ -1.96
PKNOX1P55347 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.8□□□□□ -1.96
PKNOX1P55347 OR6K1P-201ENST00000456766 971 ntBASIC2.8□□□□□ -1.96
PKNOX1P55347 RPL21P39-201ENST00000463605 483 ntBASIC2.8□□□□□ -1.96
PKNOX1P55347 AC104164.3-201ENST00000467363 1258 ntBASIC2.8□□□□□ -1.96
PKNOX1P55347 RPL21P93-201ENST00000480465 489 ntBASIC2.8□□□□□ -1.96
PKNOX1P55347 AC233702.1-201ENST00000482905 502 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms