Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 RNA5SP492-201ENST00000411330 114 ntBASIC2.83□□□□□ -1.96
CDH6P55285 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.83□□□□□ -1.96
CDH6P55285 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.83□□□□□ -1.96
CDH6P55285 RPL7P44-201ENST00000424827 742 ntBASIC2.83□□□□□ -1.96
CDH6P55285 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.83□□□□□ -1.96
CDH6P55285 AC087499.2-201ENST00000432861 149 ntBASIC2.83□□□□□ -1.96
CDH6P55285 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
CDH6P55285 RPL23AP74-201ENST00000437246 471 ntBASIC2.83□□□□□ -1.96
CDH6P55285 MUPP-201ENST00000438111 566 ntBASIC2.83□□□□□ -1.96
CDH6P55285 RPS24P13-201ENST00000442520 397 ntBASIC2.83□□□□□ -1.96
CDH6P55285 RAC1P7-201ENST00000445367 377 ntBASIC2.83□□□□□ -1.96
CDH6P55285 MRPL50P4-201ENST00000446432 475 ntBASIC2.83□□□□□ -1.96
CDH6P55285 RPL23AP20-201ENST00000447965 421 ntBASIC2.83□□□□□ -1.96
CDH6P55285 RPS3AP14-201ENST00000483907 780 ntBASIC2.83□□□□□ -1.96
CDH6P55285 COX7A2P2-201ENST00000505291 250 ntBASIC2.83□□□□□ -1.96
CDH6P55285 AC010460.2-201ENST00000509054 677 ntBASIC2.83□□□□□ -1.96
CDH6P55285 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CDH6P55285 AP001189.2-201ENST00000527320 189 ntBASIC2.83□□□□□ -1.96
CDH6P55285 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CDH6P55285 CR383656.7-201ENST00000548164 174 ntBASIC2.83□□□□□ -1.96
CDH6P55285 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.83□□□□□ -1.96
CDH6P55285 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.83□□□□□ -1.96
CDH6P55285 AC090695.1-201ENST00000561269 1222 ntBASIC2.83□□□□□ -1.96
CDH6P55285 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.83□□□□□ -1.96
CDH6P55285 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.83□□□□□ -1.96
CDH6P55285 GLUD1P4-201ENST00000590914 418 ntBASIC2.83□□□□□ -1.96
CDH6P55285 AC097504.2-201ENST00000608088 454 ntBASIC2.83□□□□□ -1.96
CDH6P55285 AC069234.5-201ENST00000611056 416 ntBASIC2.83□□□□□ -1.96
CDH6P55285 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.83□□□□□ -1.96
CDH6P55285 CR381653.2-201ENST00000624041 768 ntBASIC2.83□□□□□ -1.96
CDH6P55285 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.83□□□□□ -1.96
CDH6P55285 AC087821.2-201ENST00000637086 450 ntBASIC2.83□□□□□ -1.96
CDH6P55285 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CDH6P55285 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CDH6P55285 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
CDH6P55285 MIR506-201ENST00000384998 124 ntBASIC2.82□□□□□ -1.96
CDH6P55285 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CDH6P55285 MCTS2P-201ENST00000394552 546 ntBASIC2.82□□□□□ -1.96
CDH6P55285 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.82□□□□□ -1.96
CDH6P55285 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.82□□□□□ -1.96
CDH6P55285 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.82□□□□□ -1.96
CDH6P55285 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.82□□□□□ -1.96
CDH6P55285 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.82□□□□□ -1.96
CDH6P55285 AC112220.1-201ENST00000434628 355 ntBASIC2.82□□□□□ -1.96
CDH6P55285 NDUFB4P6-201ENST00000436819 366 ntBASIC2.82□□□□□ -1.96
CDH6P55285 AC107083.1-201ENST00000439643 279 ntBASIC2.82□□□□□ -1.96
CDH6P55285 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.82□□□□□ -1.96
CDH6P55285 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.82□□□□□ -1.96
CDH6P55285 SETP11-201ENST00000473027 690 ntBASIC2.82□□□□□ -1.96
CDH6P55285 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.82□□□□□ -1.96
CDH6P55285 RN7SL297P-201ENST00000483161 293 ntBASIC2.82□□□□□ -1.96
CDH6P55285 AC009901.1-201ENST00000506703 541 ntBASIC2.82□□□□□ -1.96
CDH6P55285 RNA5SP76-201ENST00000516277 87 ntBASIC2.82□□□□□ -1.96
CDH6P55285 RNA5SP367-201ENST00000516557 118 ntBASIC2.82□□□□□ -1.96
CDH6P55285 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.82□□□□□ -1.96
CDH6P55285 AL136520.1-202ENST00000555494 763 ntBASIC2.82□□□□□ -1.96
CDH6P55285 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.82□□□□□ -1.96
CDH6P55285 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.82□□□□□ -1.96
CDH6P55285 AC011260.1-201ENST00000578420 472 ntBASIC2.82□□□□□ -1.96
CDH6P55285 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.82□□□□□ -1.96
CDH6P55285 AC023043.3-201ENST00000593113 385 ntBASIC2.82□□□□□ -1.96
CDH6P55285 AC013444.2-201ENST00000603317 787 ntBASIC2.82□□□□□ -1.96
CDH6P55285 NUTF2P8-201ENST00000604593 363 ntBASIC2.82□□□□□ -1.96
CDH6P55285 HSPE1P7-201ENST00000604681 321 ntBASIC2.82□□□□□ -1.96
CDH6P55285 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.82□□□□□ -1.96
CDH6P55285 AL592148.2-201ENST00000612210 372 ntBASIC2.82□□□□□ -1.96
CDH6P55285 AC007275.1-201ENST00000621243 671 ntBASIC2.82□□□□□ -1.96
CDH6P55285 AL157770.1-201ENST00000623049 439 ntBASIC2.82□□□□□ -1.96
CDH6P55285 AC109454.4-201ENST00000623411 649 ntBASIC2.82□□□□□ -1.96
CDH6P55285 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.82□□□□□ -1.96
CDH6P55285 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.82□□□□□ -1.96
CDH6P55285 U6.101-201ENST00000637707 76 ntBASIC2.82□□□□□ -1.96
CDH6P55285 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CDH6P55285 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
CDH6P55285 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.81□□□□□ -1.96
CDH6P55285 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CDH6P55285 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CDH6P55285 RNU1-112P-201ENST00000364401 164 ntBASIC2.81□□□□□ -1.96
CDH6P55285 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CDH6P55285 RNU1-109P-201ENST00000383960 147 ntBASIC2.81□□□□□ -1.96
CDH6P55285 RNU2-47P-201ENST00000410649 186 ntBASIC2.81□□□□□ -1.96
CDH6P55285 BEND7P1-201ENST00000422058 457 ntBASIC2.81□□□□□ -1.96
CDH6P55285 AC092634.2-201ENST00000428146 1010 ntBASIC2.81□□□□□ -1.96
CDH6P55285 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.81□□□□□ -1.96
CDH6P55285 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.81□□□□□ -1.96
CDH6P55285 AC244505.3-201ENST00000454598 187 ntBASIC2.81□□□□□ -1.96
CDH6P55285 AC104164.3-201ENST00000467363 1258 ntBASIC2.81□□□□□ -1.96
CDH6P55285 AC090525.1-201ENST00000479116 478 ntBASIC2.81□□□□□ -1.96
CDH6P55285 AC097462.2-201ENST00000504623 481 ntBASIC2.81□□□□□ -1.96
CDH6P55285 VN1R104P-201ENST00000505115 1009 ntBASIC2.81□□□□□ -1.96
CDH6P55285 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.81□□□□□ -1.96
CDH6P55285 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.81□□□□□ -1.96
CDH6P55285 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.81□□□□□ -1.96
CDH6P55285 AP003102.1-201ENST00000525638 661 ntBASIC2.81□□□□□ -1.96
CDH6P55285 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.81□□□□□ -1.96
CDH6P55285 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.81□□□□□ -1.96
CDH6P55285 AC007954.1-201ENST00000554198 494 ntBASIC2.81□□□□□ -1.96
CDH6P55285 AL355836.1-201ENST00000555951 870 ntBASIC2.81□□□□□ -1.96
CDH6P55285 AC122134.1-202ENST00000569111 1201 ntBASIC2.81□□□□□ -1.96
CDH6P55285 AC015688.2-201ENST00000584523 262 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms