Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 COX6CP8-201ENST00000522620 226 ntBASIC4.89□□□□□ -1.63
MRE11P49959 AP003181.2-201ENST00000528941 181 ntBASIC4.89□□□□□ -1.63
MRE11P49959 AP003034.1-201ENST00000534621 422 ntBASIC4.89□□□□□ -1.63
MRE11P49959 CBX3P5-201ENST00000552017 521 ntBASIC4.89□□□□□ -1.63
MRE11P49959 AL138976.2-201ENST00000563989 694 ntBASIC4.89□□□□□ -1.63
MRE11P49959 LARP7P2-201ENST00000575306 125 ntBASIC4.89□□□□□ -1.63
MRE11P49959 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.89□□□□□ -1.63
MRE11P49959 AC005261.5-201ENST00000596280 355 ntBASIC4.89□□□□□ -1.63
MRE11P49959 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.89□□□□□ -1.63
MRE11P49959 SRGNP1-201ENST00000603392 451 ntBASIC4.89□□□□□ -1.63
MRE11P49959 AC012507.3-201ENST00000603556 477 ntBASIC4.89□□□□□ -1.63
MRE11P49959 AL035413.2-201ENST00000604801 525 ntBASIC4.89□□□□□ -1.63
MRE11P49959 AC110741.2-201ENST00000605278 268 ntBASIC4.89□□□□□ -1.63
MRE11P49959 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.89□□□□□ -1.63
MRE11P49959 AC139792.3-201ENST00000623525 224 ntBASIC4.89□□□□□ -1.63
MRE11P49959 MIR6715B-201ENST00000637172 77 ntBASIC4.89□□□□□ -1.63
MRE11P49959 U6.101-201ENST00000637707 76 ntBASIC4.89□□□□□ -1.63
MRE11P49959 MIR492-201ENST00000638676 116 ntBASIC4.89□□□□□ -1.63
MRE11P49959 AC025031.4-201ENST00000621248 3271 ntBASIC4.89□□□□□ -1.63
MRE11P49959 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
MRE11P49959 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
MRE11P49959 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.89□□□□□ -1.63
MRE11P49959 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.88□□□□□ -1.63
MRE11P49959 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
MRE11P49959 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.88□□□□□ -1.63
MRE11P49959 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
MRE11P49959 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
MRE11P49959 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
MRE11P49959 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.88□□□□□ -1.63
MRE11P49959 Y_RNA.509-201ENST00000384506 99 ntBASIC4.88□□□□□ -1.63
MRE11P49959 SDHCP2-201ENST00000398565 501 ntBASIC4.88□□□□□ -1.63
MRE11P49959 Z92545.1-201ENST00000411782 234 ntBASIC4.88□□□□□ -1.63
MRE11P49959 AC093578.1-201ENST00000415219 368 ntBASIC4.88□□□□□ -1.63
MRE11P49959 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.88□□□□□ -1.63
MRE11P49959 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
MRE11P49959 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
MRE11P49959 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.88□□□□□ -1.63
MRE11P49959 YWHAZP8-201ENST00000436935 731 ntBASIC4.88□□□□□ -1.63
MRE11P49959 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
MRE11P49959 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.88□□□□□ -1.63
MRE11P49959 MTND1P12-201ENST00000455231 147 ntBASIC4.88□□□□□ -1.63
MRE11P49959 MTCO3P2-201ENST00000457365 171 ntBASIC4.88□□□□□ -1.63
MRE11P49959 PMCHL2-203ENST00000457791 237 ntBASIC4.88□□□□□ -1.63
MRE11P49959 RN7SL93P-201ENST00000463035 293 ntBASIC4.88□□□□□ -1.63
MRE11P49959 RPL7P22-201ENST00000466005 733 ntBASIC4.88□□□□□ -1.63
MRE11P49959 AC104164.2-201ENST00000496953 495 ntBASIC4.88□□□□□ -1.63
MRE11P49959 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.88□□□□□ -1.63
MRE11P49959 AC018797.3-201ENST00000513388 1241 ntBASIC4.88□□□□□ -1.63
MRE11P49959 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.88□□□□□ -1.63
MRE11P49959 LRRC34P2-201ENST00000514850 553 ntBASIC4.88□□□□□ -1.63
MRE11P49959 RN7SKP96-201ENST00000516948 297 ntBASIC4.88□□□□□ -1.63
MRE11P49959 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.88□□□□□ -1.63
MRE11P49959 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.88□□□□□ -1.63
MRE11P49959 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.88□□□□□ -1.63
MRE11P49959 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.88□□□□□ -1.63
MRE11P49959 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.88□□□□□ -1.63
MRE11P49959 AL359212.1-201ENST00000556608 614 ntBASIC4.88□□□□□ -1.63
MRE11P49959 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.88□□□□□ -1.63
MRE11P49959 AC044792.1-201ENST00000593294 196 ntBASIC4.88□□□□□ -1.63
MRE11P49959 RNU6-87P-201ENST00000607561 108 ntBASIC4.88□□□□□ -1.63
MRE11P49959 AC084757.4-201ENST00000616350 526 ntBASIC4.88□□□□□ -1.63
MRE11P49959 AL136221.1-201ENST00000621449 509 ntBASIC4.88□□□□□ -1.63
MRE11P49959 U3.53-201ENST00000628922 216 ntBASIC4.88□□□□□ -1.63
MRE11P49959 OR2L1P-202ENST00000641567 1023 ntBASIC4.88□□□□□ -1.63
MRE11P49959 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
MRE11P49959 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.88□□□□□ -1.63
MRE11P49959 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
MRE11P49959 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.88□□□□□ -1.63
MRE11P49959 AC125257.1-201ENST00000560400 2930 ntBASIC4.88□□□□□ -1.63
MRE11P49959 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.88□□□□□ -1.63
MRE11P49959 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.88□□□□□ -1.63
MRE11P49959 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.88□□□□□ -1.63
MRE11P49959 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
MRE11P49959 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.87□□□□□ -1.63
MRE11P49959 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
MRE11P49959 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
MRE11P49959 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.87□□□□□ -1.63
MRE11P49959 Y_RNA.279-201ENST00000364763 95 ntBASIC4.87□□□□□ -1.63
MRE11P49959 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
MRE11P49959 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
MRE11P49959 MIR3074-201ENST00000384885 81 ntBASIC4.87□□□□□ -1.63
MRE11P49959 RPL7P25-201ENST00000404151 721 ntBASIC4.87□□□□□ -1.63
MRE11P49959 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.87□□□□□ -1.63
MRE11P49959 AC104850.1-201ENST00000435940 476 ntBASIC4.87□□□□□ -1.63
MRE11P49959 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.87□□□□□ -1.63
MRE11P49959 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.87□□□□□ -1.63
MRE11P49959 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.87□□□□□ -1.63
MRE11P49959 RPL23AP43-201ENST00000446445 471 ntBASIC4.87□□□□□ -1.63
MRE11P49959 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.87□□□□□ -1.63
MRE11P49959 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.87□□□□□ -1.63
MRE11P49959 AC079382.1-201ENST00000493346 557 ntBASIC4.87□□□□□ -1.63
MRE11P49959 AC106872.2-201ENST00000494303 480 ntBASIC4.87□□□□□ -1.63
MRE11P49959 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.87□□□□□ -1.63
MRE11P49959 RNU6-1281P-201ENST00000516223 105 ntBASIC4.87□□□□□ -1.63
MRE11P49959 RN7SKP82-201ENST00000516786 223 ntBASIC4.87□□□□□ -1.63
MRE11P49959 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.87□□□□□ -1.63
MRE11P49959 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.87□□□□□ -1.63
MRE11P49959 OR5AL2P-201ENST00000532185 920 ntBASIC4.87□□□□□ -1.63
MRE11P49959 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.87□□□□□ -1.63
MRE11P49959 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms