Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC6.92□□□□□ -1.3
PRIM1P49642 AC006363.1-201ENST00000603806 463 ntBASIC6.92□□□□□ -1.3
PRIM1P49642 BX284668.6-201ENST00000606899 438 ntBASIC6.92□□□□□ -1.3
PRIM1P49642 AC006023.2-201ENST00000609916 167 ntBASIC6.92□□□□□ -1.3
PRIM1P49642 AC110801.1-201ENST00000623590 212 ntBASIC6.92□□□□□ -1.3
PRIM1P49642 AC073869.10-201ENST00000642016 354 ntBASIC6.92□□□□□ -1.3
PRIM1P49642 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
PRIM1P49642 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.92□□□□□ -1.3
PRIM1P49642 AC026951.1-201ENST00000559530 2459 ntBASIC6.92□□□□□ -1.3
PRIM1P49642 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PRIM1P49642 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
PRIM1P49642 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.92□□□□□ -1.3
PRIM1P49642 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.92□□□□□ -1.3
PRIM1P49642 AC010329.2-201ENST00000595195 2737 ntBASIC6.92□□□□□ -1.3
PRIM1P49642 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
PRIM1P49642 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PRIM1P49642 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
PRIM1P49642 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PRIM1P49642 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PRIM1P49642 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PRIM1P49642 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PRIM1P49642 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
PRIM1P49642 RNY1P16-201ENST00000363063 111 ntBASIC6.91□□□□□ -1.3
PRIM1P49642 EI24P4-201ENST00000423683 1078 ntBASIC6.91□□□□□ -1.3
PRIM1P49642 MRPS21P2-201ENST00000424704 264 ntBASIC6.91□□□□□ -1.3
PRIM1P49642 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC6.91□□□□□ -1.3
PRIM1P49642 AC010733.1-201ENST00000451515 401 ntBASIC6.91□□□□□ -1.3
PRIM1P49642 RNU7-187P-201ENST00000458985 68 ntBASIC6.91□□□□□ -1.3
PRIM1P49642 snoU13.7-201ENST00000459220 104 ntBASIC6.91□□□□□ -1.3
PRIM1P49642 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.91□□□□□ -1.3
PRIM1P49642 AC034114.1-201ENST00000520293 285 ntBASIC6.91□□□□□ -1.3
PRIM1P49642 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC6.91□□□□□ -1.3
PRIM1P49642 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
PRIM1P49642 MIR4273-201ENST00000582824 84 ntBASIC6.91□□□□□ -1.3
PRIM1P49642 AC064801.1-201ENST00000612025 407 ntBASIC6.91□□□□□ -1.3
PRIM1P49642 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC6.91□□□□□ -1.3
PRIM1P49642 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PRIM1P49642 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PRIM1P49642 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PRIM1P49642 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PRIM1P49642 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
PRIM1P49642 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
PRIM1P49642 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
PRIM1P49642 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.91□□□□□ -1.3
PRIM1P49642 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PRIM1P49642 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.9□□□□□ -1.3
PRIM1P49642 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.9□□□□□ -1.3
PRIM1P49642 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC6.9□□□□□ -1.3
PRIM1P49642 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.9□□□□□ -1.3
PRIM1P49642 ANKRD36BP1-201ENST00000358576 1779 ntBASIC6.9□□□□□ -1.3
PRIM1P49642 DDX10P1-201ENST00000448545 1933 ntBASIC6.9□□□□□ -1.3
PRIM1P49642 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
PRIM1P49642 AC126755.2-208ENST00000327792 462 ntBASIC6.9□□□□□ -1.3
PRIM1P49642 AC138969.1-213ENST00000331436 462 ntBASIC6.9□□□□□ -1.3
PRIM1P49642 RN7SKP95-201ENST00000362860 303 ntBASIC6.9□□□□□ -1.3
PRIM1P49642 RNVU1-3-201ENST00000364313 161 ntBASIC6.9□□□□□ -1.3
PRIM1P49642 RNU6-806P-201ENST00000365147 105 ntBASIC6.9□□□□□ -1.3
PRIM1P49642 MIR628-201ENST00000385229 95 ntBASIC6.9□□□□□ -1.3
PRIM1P49642 MIR92A2-201ENST00000385299 75 ntBASIC6.9□□□□□ -1.3
PRIM1P49642 RNU2-25P-201ENST00000411041 191 ntBASIC6.9□□□□□ -1.3
PRIM1P49642 BX276092.3-201ENST00000424182 230 ntBASIC6.9□□□□□ -1.3
PRIM1P49642 AL158071.1-201ENST00000430315 461 ntBASIC6.9□□□□□ -1.3
PRIM1P49642 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC6.9□□□□□ -1.3
PRIM1P49642 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.9□□□□□ -1.3
PRIM1P49642 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
PRIM1P49642 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.9□□□□□ -1.3
PRIM1P49642 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC6.9□□□□□ -1.3
PRIM1P49642 AC021006.3-201ENST00000530771 192 ntBASIC6.9□□□□□ -1.3
PRIM1P49642 HMGN2P47-201ENST00000559378 272 ntBASIC6.9□□□□□ -1.3
PRIM1P49642 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.9□□□□□ -1.3
PRIM1P49642 MIR3133-201ENST00000583157 78 ntBASIC6.9□□□□□ -1.3
PRIM1P49642 AL161616.1-201ENST00000611867 286 ntBASIC6.9□□□□□ -1.3
PRIM1P49642 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC6.9□□□□□ -1.3
PRIM1P49642 AL137141.1-201ENST00000624622 4836 ntBASIC6.9□□□□□ -1.3
PRIM1P49642 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC6.9□□□□□ -1.3
PRIM1P49642 MFSD8-216ENST00000641147 4009 ntBASIC6.9□□□□□ -1.3
PRIM1P49642 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.9□□□□□ -1.31
PRIM1P49642 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
PRIM1P49642 AC020656.2-201ENST00000613291 5309 ntBASIC6.9□□□□□ -1.31
PRIM1P49642 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
PRIM1P49642 AC104964.3-201ENST00000606115 2860 ntBASIC6.9□□□□□ -1.31
PRIM1P49642 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.89□□□□□ -1.31
PRIM1P49642 AC018628.1-201ENST00000624147 3819 ntBASIC6.89□□□□□ -1.31
PRIM1P49642 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PRIM1P49642 SMG1P7-201ENST00000565246 2704 ntBASIC6.89□□□□□ -1.31
PRIM1P49642 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PRIM1P49642 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
PRIM1P49642 Y_RNA.26-201ENST00000362539 101 ntBASIC6.89□□□□□ -1.31
PRIM1P49642 U3.3-201ENST00000362986 216 ntBASIC6.89□□□□□ -1.31
PRIM1P49642 Y_RNA.151-201ENST00000363566 112 ntBASIC6.89□□□□□ -1.31
PRIM1P49642 RNA5SP240-201ENST00000365355 128 ntBASIC6.89□□□□□ -1.31
PRIM1P49642 RPS4XP7-201ENST00000406274 780 ntBASIC6.89□□□□□ -1.31
PRIM1P49642 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.89□□□□□ -1.31
PRIM1P49642 AC098831.1-201ENST00000440661 216 ntBASIC6.89□□□□□ -1.31
PRIM1P49642 CEACAMP6-201ENST00000452007 574 ntBASIC6.89□□□□□ -1.31
PRIM1P49642 AC008481.1-201ENST00000463278 396 ntBASIC6.89□□□□□ -1.31
PRIM1P49642 RNU6-677P-201ENST00000516914 101 ntBASIC6.89□□□□□ -1.31
PRIM1P49642 AC103783.1-201ENST00000520506 373 ntBASIC6.89□□□□□ -1.31
PRIM1P49642 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.89□□□□□ -1.31
PRIM1P49642 AC009643.1-201ENST00000532030 391 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms