Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AC008687.2-201ENST00000597865 520 ntBASIC1.78□□□□□ -2.12
CENPFP49454 SNORA51.12-201ENST00000384448 134 ntBASIC1.78□□□□□ -2.12
CENPFP49454 HMGB1P12-201ENST00000438594 598 ntBASIC1.78□□□□□ -2.12
CENPFP49454 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.78□□□□□ -2.12
CENPFP49454 AC109486.1-201ENST00000486833 374 ntBASIC1.78□□□□□ -2.12
CENPFP49454 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.78□□□□□ -2.12
CENPFP49454 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.78□□□□□ -2.12
CENPFP49454 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC1.78□□□□□ -2.12
CENPFP49454 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.13
CENPFP49454 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.78□□□□□ -2.13
CENPFP49454 AC073310.1-201ENST00000423226 1033 ntBASIC1.78□□□□□ -2.13
CENPFP49454 HMGN2P19-201ENST00000425149 265 ntBASIC1.78□□□□□ -2.13
CENPFP49454 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.78□□□□□ -2.13
CENPFP49454 AL645568.3-201ENST00000433683 316 ntBASIC1.78□□□□□ -2.13
CENPFP49454 TBCAP3-201ENST00000512475 312 ntBASIC1.78□□□□□ -2.13
CENPFP49454 HMGN2P47-201ENST00000559378 272 ntBASIC1.78□□□□□ -2.13
CENPFP49454 MIR502-201ENST00000606349 86 ntBASIC1.78□□□□□ -2.13
CENPFP49454 AC025016.1-201ENST00000616746 682 ntBASIC1.78□□□□□ -2.13
CENPFP49454 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.78□□□□□ -2.13
CENPFP49454 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CENPFP49454 RNA5SP457-201ENST00000363657 124 ntBASIC1.77□□□□□ -2.13
CENPFP49454 HMGB1P26-201ENST00000452520 628 ntBASIC1.77□□□□□ -2.13
CENPFP49454 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.77□□□□□ -2.13
CENPFP49454 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.77□□□□□ -2.13
CENPFP49454 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CENPFP49454 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.77□□□□□ -2.13
CENPFP49454 BX510359.4-201ENST00000423750 193 ntBASIC1.77□□□□□ -2.13
CENPFP49454 SNORA70.14-201ENST00000516205 110 ntBASIC1.77□□□□□ -2.13
CENPFP49454 KATNBL1P1-201ENST00000605192 748 ntBASIC1.77□□□□□ -2.13
CENPFP49454 AL512283.1-201ENST00000606756 1384 ntBASIC1.77□□□□□ -2.13
CENPFP49454 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
CENPFP49454 RNU1-139P-201ENST00000391307 165 ntBASIC1.76□□□□□ -2.13
CENPFP49454 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.76□□□□□ -2.13
CENPFP49454 U73479.1-201ENST00000618062 168 ntBASIC1.76□□□□□ -2.13
CENPFP49454 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.76□□□□□ -2.13
CENPFP49454 RAD23BP2-201ENST00000416003 1207 ntBASIC1.76□□□□□ -2.13
CENPFP49454 OR7L1P-201ENST00000456181 380 ntBASIC1.76□□□□□ -2.13
CENPFP49454 RPS29P29-201ENST00000456396 171 ntBASIC1.76□□□□□ -2.13
CENPFP49454 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC1.76□□□□□ -2.13
CENPFP49454 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC1.76□□□□□ -2.13
CENPFP49454 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.76□□□□□ -2.13
CENPFP49454 ABI1P1-201ENST00000603375 1120 ntBASIC1.76□□□□□ -2.13
CENPFP49454 MTCO1P7-201ENST00000419523 1542 ntBASIC1.76□□□□□ -2.13
CENPFP49454 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.76□□□□□ -2.13
CENPFP49454 RNU6-316P-201ENST00000391027 107 ntBASIC1.76□□□□□ -2.13
CENPFP49454 RPL23AP29-201ENST00000397284 453 ntBASIC1.76□□□□□ -2.13
CENPFP49454 AL138785.1-201ENST00000425821 331 ntBASIC1.76□□□□□ -2.13
CENPFP49454 AC009474.2-201ENST00000451383 136 ntBASIC1.76□□□□□ -2.13
CENPFP49454 AC069528.1-202ENST00000482888 637 ntBASIC1.76□□□□□ -2.13
CENPFP49454 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.76□□□□□ -2.13
CENPFP49454 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
CENPFP49454 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
CENPFP49454 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CENPFP49454 MIR520E-201ENST00000384867 87 ntBASIC1.75□□□□□ -2.13
CENPFP49454 AC005517.2-201ENST00000424673 553 ntBASIC1.75□□□□□ -2.13
CENPFP49454 AC234781.2-201ENST00000426370 994 ntBASIC1.75□□□□□ -2.13
CENPFP49454 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.75□□□□□ -2.13
CENPFP49454 AC011979.1-201ENST00000472300 483 ntBASIC1.75□□□□□ -2.13
CENPFP49454 SUMO2P6-201ENST00000505273 288 ntBASIC1.75□□□□□ -2.13
CENPFP49454 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.75□□□□□ -2.13
CENPFP49454 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC1.75□□□□□ -2.13
CENPFP49454 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
CENPFP49454 SEPT7P3-201ENST00000455017 621 ntBASIC1.75□□□□□ -2.13
CENPFP49454 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.75□□□□□ -2.13
CENPFP49454 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CENPFP49454 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.75□□□□□ -2.13
CENPFP49454 OR4G11P-202ENST00000642116 1414 ntBASIC1.74□□□□□ -2.13
CENPFP49454 RNA5SP257-201ENST00000363023 116 ntBASIC1.74□□□□□ -2.13
CENPFP49454 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.74□□□□□ -2.13
CENPFP49454 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.74□□□□□ -2.13
CENPFP49454 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CENPFP49454 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CENPFP49454 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
CENPFP49454 DDX43P2-201ENST00000604753 1354 ntBASIC1.74□□□□□ -2.13
CENPFP49454 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CENPFP49454 MTND4P13-201ENST00000402078 1023 ntBASIC1.74□□□□□ -2.13
CENPFP49454 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CENPFP49454 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.74□□□□□ -2.13
CENPFP49454 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.74□□□□□ -2.13
CENPFP49454 MIR6788-201ENST00000618842 66 ntBASIC1.74□□□□□ -2.13
CENPFP49454 BTBD10P2-201ENST00000404779 676 ntBASIC1.74□□□□□ -2.13
CENPFP49454 HIGD1AP11-201ENST00000438361 280 ntBASIC1.74□□□□□ -2.13
CENPFP49454 COX6CP14-201ENST00000469580 174 ntBASIC1.74□□□□□ -2.13
CENPFP49454 AC078918.1-201ENST00000498515 228 ntBASIC1.74□□□□□ -2.13
CENPFP49454 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.74□□□□□ -2.13
CENPFP49454 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CENPFP49454 AC006026.1-201ENST00000444025 1803 ntBASIC1.73□□□□□ -2.13
CENPFP49454 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.73□□□□□ -2.13
CENPFP49454 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CENPFP49454 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.73□□□□□ -2.13
CENPFP49454 HMGN1P28-201ENST00000521340 364 ntBASIC1.73□□□□□ -2.13
CENPFP49454 SNORD114-27-201ENST00000363766 70 ntBASIC1.73□□□□□ -2.13
CENPFP49454 RNA5SP138-201ENST00000365098 114 ntBASIC1.73□□□□□ -2.13
CENPFP49454 TRIAP1P1-201ENST00000427062 225 ntBASIC1.73□□□□□ -2.13
CENPFP49454 NEK4P1-201ENST00000433383 879 ntBASIC1.73□□□□□ -2.13
CENPFP49454 AC092989.1-201ENST00000481235 277 ntBASIC1.73□□□□□ -2.13
CENPFP49454 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
CENPFP49454 MIR4506-201ENST00000584693 77 ntBASIC1.73□□□□□ -2.13
CENPFP49454 FAM106DP-201ENST00000586416 501 ntBASIC1.73□□□□□ -2.13
CENPFP49454 AC016727.2-201ENST00000603988 621 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms