Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 ANKRD36P1-201ENST00000344424 659 ntBASIC2.6□□□□□ -1.99
CX3CR1P49238 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CX3CR1P49238 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CX3CR1P49238 SNORA63.1-201ENST00000362493 131 ntBASIC2.6□□□□□ -1.99
CX3CR1P49238 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CX3CR1P49238 RPS3AP24-201ENST00000407896 734 ntBASIC2.6□□□□□ -1.99
CX3CR1P49238 AL592310.1-201ENST00000414330 671 ntBASIC2.6□□□□□ -1.99
CX3CR1P49238 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.6□□□□□ -1.99
CX3CR1P49238 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.6□□□□□ -1.99
CX3CR1P49238 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.6□□□□□ -1.99
CX3CR1P49238 SETP8-201ENST00000435341 628 ntBASIC2.6□□□□□ -1.99
CX3CR1P49238 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.6□□□□□ -1.99
CX3CR1P49238 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.6□□□□□ -1.99
CX3CR1P49238 MTND2P39-201ENST00000457230 764 ntBASIC2.6□□□□□ -1.99
CX3CR1P49238 RPL21P41-201ENST00000459863 264 ntBASIC2.6□□□□□ -1.99
CX3CR1P49238 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CX3CR1P49238 RN7SL504P-201ENST00000494496 287 ntBASIC2.6□□□□□ -1.99
CX3CR1P49238 AC008427.1-201ENST00000503102 655 ntBASIC2.6□□□□□ -1.99
CX3CR1P49238 AC108043.1-201ENST00000512696 574 ntBASIC2.6□□□□□ -1.99
CX3CR1P49238 GMPSP1-201ENST00000514075 579 ntBASIC2.6□□□□□ -1.99
CX3CR1P49238 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.6□□□□□ -1.99
CX3CR1P49238 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.6□□□□□ -1.99
CX3CR1P49238 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.6□□□□□ -1.99
CX3CR1P49238 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.6□□□□□ -1.99
CX3CR1P49238 MIR4429-201ENST00000580105 73 ntBASIC2.6□□□□□ -1.99
CX3CR1P49238 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.6□□□□□ -1.99
CX3CR1P49238 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.6□□□□□ -1.99
CX3CR1P49238 AL022067.1-201ENST00000602426 454 ntBASIC2.6□□□□□ -1.99
CX3CR1P49238 U73023.1-201ENST00000603134 700 ntBASIC2.6□□□□□ -1.99
CX3CR1P49238 AC080013.4-201ENST00000607624 649 ntBASIC2.6□□□□□ -1.99
CX3CR1P49238 AC093673.2-201ENST00000609674 331 ntBASIC2.6□□□□□ -1.99
CX3CR1P49238 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.6□□□□□ -1.99
CX3CR1P49238 AC107871.2-201ENST00000612894 502 ntBASIC2.6□□□□□ -1.99
CX3CR1P49238 AC025588.4-201ENST00000615802 908 ntBASIC2.6□□□□□ -1.99
CX3CR1P49238 AC006213.4-201ENST00000616184 634 ntBASIC2.6□□□□□ -1.99
CX3CR1P49238 AL158163.2-201ENST00000619110 700 ntBASIC2.6□□□□□ -1.99
CX3CR1P49238 Z99129.2-201ENST00000619967 314 ntBASIC2.6□□□□□ -1.99
CX3CR1P49238 AL049777.1-201ENST00000622740 518 ntBASIC2.6□□□□□ -1.99
CX3CR1P49238 TPTE2P4-201ENST00000258589 1605 ntBASIC2.6□□□□□ -1.99
CX3CR1P49238 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.6□□□□□ -1.99
CX3CR1P49238 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.59□□□□□ -1.99
CX3CR1P49238 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.59□□□□□ -1.99
CX3CR1P49238 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CX3CR1P49238 AL035425.3-201ENST00000564206 4996 ntBASIC2.59□□□□□ -1.99
CX3CR1P49238 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.59□□□□□ -1.99
CX3CR1P49238 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
CX3CR1P49238 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CX3CR1P49238 RNA5SP139-201ENST00000364340 117 ntBASIC2.59□□□□□ -1.99
CX3CR1P49238 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
CX3CR1P49238 SNORD21-201ENST00000383953 95 ntBASIC2.59□□□□□ -1.99
CX3CR1P49238 Y_RNA.408-201ENST00000383987 102 ntBASIC2.59□□□□□ -1.99
CX3CR1P49238 SNORA54-201ENST00000384281 123 ntBASIC2.59□□□□□ -1.99
CX3CR1P49238 RNU6-1000P-201ENST00000391066 106 ntBASIC2.59□□□□□ -1.99
CX3CR1P49238 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CX3CR1P49238 SAR1AP4-201ENST00000429225 591 ntBASIC2.59□□□□□ -1.99
CX3CR1P49238 AC104332.2-201ENST00000429959 156 ntBASIC2.59□□□□□ -1.99
CX3CR1P49238 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.59□□□□□ -1.99
CX3CR1P49238 MTCYBP45-201ENST00000435243 565 ntBASIC2.59□□□□□ -1.99
CX3CR1P49238 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.59□□□□□ -1.99
CX3CR1P49238 MTATP6P14-201ENST00000455189 673 ntBASIC2.59□□□□□ -1.99
CX3CR1P49238 RN7SL807P-201ENST00000470923 297 ntBASIC2.59□□□□□ -1.99
CX3CR1P49238 AC117440.1-201ENST00000474107 571 ntBASIC2.59□□□□□ -1.99
CX3CR1P49238 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CX3CR1P49238 RN7SL499P-201ENST00000481141 276 ntBASIC2.59□□□□□ -1.99
CX3CR1P49238 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.59□□□□□ -1.99
CX3CR1P49238 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.59□□□□□ -1.99
CX3CR1P49238 AC022483.1-201ENST00000514020 567 ntBASIC2.59□□□□□ -1.99
CX3CR1P49238 RNU6-1028P-201ENST00000517164 93 ntBASIC2.59□□□□□ -1.99
CX3CR1P49238 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.59□□□□□ -1.99
CX3CR1P49238 AC087808.1-201ENST00000520501 361 ntBASIC2.59□□□□□ -1.99
CX3CR1P49238 AC022861.1-201ENST00000522981 663 ntBASIC2.59□□□□□ -1.99
CX3CR1P49238 HSPA8P13-201ENST00000523715 472 ntBASIC2.59□□□□□ -1.99
CX3CR1P49238 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.59□□□□□ -1.99
CX3CR1P49238 DEFB130C-202ENST00000530001 230 ntBASIC2.59□□□□□ -1.99
CX3CR1P49238 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.59□□□□□ -1.99
CX3CR1P49238 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.59□□□□□ -1.99
CX3CR1P49238 AC090695.1-201ENST00000561269 1222 ntBASIC2.59□□□□□ -1.99
CX3CR1P49238 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CX3CR1P49238 TMF1P1-201ENST00000576058 373 ntBASIC2.59□□□□□ -1.99
CX3CR1P49238 MIR5004-201ENST00000579078 107 ntBASIC2.59□□□□□ -1.99
CX3CR1P49238 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.59□□□□□ -1.99
CX3CR1P49238 AC006504.3-201ENST00000586818 523 ntBASIC2.59□□□□□ -1.99
CX3CR1P49238 AC083760.1-201ENST00000589621 670 ntBASIC2.59□□□□□ -1.99
CX3CR1P49238 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.59□□□□□ -1.99
CX3CR1P49238 AC024060.1-201ENST00000607052 494 ntBASIC2.59□□□□□ -1.99
CX3CR1P49238 AL161629.2-201ENST00000615347 275 ntBASIC2.59□□□□□ -1.99
CX3CR1P49238 MIR6075-201ENST00000620782 95 ntBASIC2.59□□□□□ -1.99
CX3CR1P49238 AC004808.1-201ENST00000627671 721 ntBASIC2.59□□□□□ -1.99
CX3CR1P49238 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.59□□□□□ -1.99
CX3CR1P49238 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.59□□□□□ -1.99
CX3CR1P49238 AP005901.5-201ENST00000545779 1796 ntBASIC2.59□□□□□ -2
CX3CR1P49238 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CX3CR1P49238 SNORA38.1-201ENST00000364172 131 ntBASIC2.58□□□□□ -2
CX3CR1P49238 SNORA71.1-201ENST00000364523 117 ntBASIC2.58□□□□□ -2
CX3CR1P49238 DHFRP6-201ENST00000401776 268 ntBASIC2.58□□□□□ -2
CX3CR1P49238 AL449283.1-202ENST00000418249 604 ntBASIC2.58□□□□□ -2
CX3CR1P49238 PTP4A1P7-201ENST00000423476 514 ntBASIC2.58□□□□□ -2
CX3CR1P49238 GTF2IP7-202ENST00000436677 309 ntBASIC2.58□□□□□ -2
CX3CR1P49238 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.58□□□□□ -2
CX3CR1P49238 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms