Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 FTH1P1-201ENST00000437933 532 ntBASIC3.72□□□□□ -1.81
PCNAP12004 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.72□□□□□ -1.81
PCNAP12004 SNORA71B-202ENST00000439232 272 ntBASIC3.72□□□□□ -1.81
PCNAP12004 PGBD4P3-201ENST00000440731 581 ntBASIC3.72□□□□□ -1.81
PCNAP12004 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.72□□□□□ -1.81
PCNAP12004 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.72□□□□□ -1.81
PCNAP12004 MTND1P27-201ENST00000451117 902 ntBASIC3.72□□□□□ -1.81
PCNAP12004 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.72□□□□□ -1.81
PCNAP12004 AC007967.1-201ENST00000455422 1159 ntBASIC3.72□□□□□ -1.81
PCNAP12004 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.72□□□□□ -1.81
PCNAP12004 AP1S2P1-201ENST00000457344 379 ntBASIC3.72□□□□□ -1.81
PCNAP12004 SNORD42A-201ENST00000459584 64 ntBASIC3.72□□□□□ -1.81
PCNAP12004 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.72□□□□□ -1.81
PCNAP12004 RPS4XP13-201ENST00000483219 789 ntBASIC3.72□□□□□ -1.81
PCNAP12004 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PCNAP12004 AL139099.1-201ENST00000497398 403 ntBASIC3.72□□□□□ -1.81
PCNAP12004 AC020893.1-201ENST00000502452 580 ntBASIC3.72□□□□□ -1.81
PCNAP12004 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.72□□□□□ -1.81
PCNAP12004 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.72□□□□□ -1.81
PCNAP12004 MTCO2P32-201ENST00000514865 403 ntBASIC3.72□□□□□ -1.81
PCNAP12004 RNU6-1095P-201ENST00000516148 108 ntBASIC3.72□□□□□ -1.81
PCNAP12004 AC022616.6-201ENST00000520479 119 ntBASIC3.72□□□□□ -1.81
PCNAP12004 AP004371.1-201ENST00000525240 214 ntBASIC3.72□□□□□ -1.81
PCNAP12004 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PCNAP12004 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.72□□□□□ -1.81
PCNAP12004 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PCNAP12004 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.72□□□□□ -1.81
PCNAP12004 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCNAP12004 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.72□□□□□ -1.81
PCNAP12004 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.72□□□□□ -1.81
PCNAP12004 MIR3913-1-201ENST00000577744 102 ntBASIC3.72□□□□□ -1.81
PCNAP12004 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.72□□□□□ -1.81
PCNAP12004 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.72□□□□□ -1.81
PCNAP12004 SNRPGP15-201ENST00000600149 222 ntBASIC3.72□□□□□ -1.81
PCNAP12004 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.72□□□□□ -1.81
PCNAP12004 AC078795.2-201ENST00000602835 1252 ntBASIC3.72□□□□□ -1.81
PCNAP12004 AL606490.9-201ENST00000603331 271 ntBASIC3.72□□□□□ -1.81
PCNAP12004 BRDTP1-201ENST00000605735 677 ntBASIC3.72□□□□□ -1.81
PCNAP12004 AC104073.3-201ENST00000610942 955 ntBASIC3.72□□□□□ -1.81
PCNAP12004 AC008498.1-201ENST00000613012 531 ntBASIC3.72□□□□□ -1.81
PCNAP12004 AC138932.5-201ENST00000617759 563 ntBASIC3.72□□□□□ -1.81
PCNAP12004 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.72□□□□□ -1.81
PCNAP12004 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCNAP12004 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.72□□□□□ -1.81
PCNAP12004 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PCNAP12004 AC118273.1-201ENST00000525324 3006 ntBASIC3.72□□□□□ -1.81
PCNAP12004 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCNAP12004 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PCNAP12004 MAPK10-362ENST00000641864 4484 ntBASIC3.72□□□□□ -1.81
PCNAP12004 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
PCNAP12004 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
PCNAP12004 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.71□□□□□ -1.81
PCNAP12004 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
PCNAP12004 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.71□□□□□ -1.81
PCNAP12004 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.71□□□□□ -1.82
PCNAP12004 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.71□□□□□ -1.82
PCNAP12004 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PCNAP12004 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
PCNAP12004 MIR135A2-201ENST00000384854 100 ntBASIC3.71□□□□□ -1.82
PCNAP12004 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PCNAP12004 RNU6-195P-201ENST00000411352 109 ntBASIC3.71□□□□□ -1.82
PCNAP12004 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.71□□□□□ -1.82
PCNAP12004 RPS3AP3-201ENST00000411933 242 ntBASIC3.71□□□□□ -1.82
PCNAP12004 AC007899.1-201ENST00000412776 775 ntBASIC3.71□□□□□ -1.82
PCNAP12004 RSL24D1P6-201ENST00000426934 401 ntBASIC3.71□□□□□ -1.82
PCNAP12004 BX890604.2-201ENST00000427883 474 ntBASIC3.71□□□□□ -1.82
PCNAP12004 MTCO3P5-201ENST00000433620 714 ntBASIC3.71□□□□□ -1.82
PCNAP12004 OR4C10P-201ENST00000434991 931 ntBASIC3.71□□□□□ -1.82
PCNAP12004 AC108734.1-201ENST00000439549 399 ntBASIC3.71□□□□□ -1.82
PCNAP12004 AC244505.5-201ENST00000443639 207 ntBASIC3.71□□□□□ -1.82
PCNAP12004 RPL17P49-201ENST00000443728 411 ntBASIC3.71□□□□□ -1.82
PCNAP12004 AC010655.1-201ENST00000449336 292 ntBASIC3.71□□□□□ -1.82
PCNAP12004 AL033528.1-201ENST00000453780 140 ntBASIC3.71□□□□□ -1.82
PCNAP12004 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.71□□□□□ -1.82
PCNAP12004 RPL23AP14-201ENST00000468281 468 ntBASIC3.71□□□□□ -1.82
PCNAP12004 MTND1P3-201ENST00000484956 952 ntBASIC3.71□□□□□ -1.82
PCNAP12004 AC055855.1-201ENST00000489563 579 ntBASIC3.71□□□□□ -1.82
PCNAP12004 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.71□□□□□ -1.82
PCNAP12004 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PCNAP12004 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.71□□□□□ -1.82
PCNAP12004 FTH1P21-201ENST00000512179 511 ntBASIC3.71□□□□□ -1.82
PCNAP12004 RNU6-798P-201ENST00000516912 103 ntBASIC3.71□□□□□ -1.82
PCNAP12004 MIR2116-201ENST00000517221 80 ntBASIC3.71□□□□□ -1.82
PCNAP12004 AC022695.1-201ENST00000522089 237 ntBASIC3.71□□□□□ -1.82
PCNAP12004 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PCNAP12004 AP000907.2-201ENST00000530827 353 ntBASIC3.71□□□□□ -1.82
PCNAP12004 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.71□□□□□ -1.82
PCNAP12004 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.71□□□□□ -1.82
PCNAP12004 AL121603.1-201ENST00000553815 142 ntBASIC3.71□□□□□ -1.82
PCNAP12004 RPL21P5-201ENST00000554662 472 ntBASIC3.71□□□□□ -1.82
PCNAP12004 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.71□□□□□ -1.82
PCNAP12004 AC011451.2-201ENST00000604303 598 ntBASIC3.71□□□□□ -1.82
PCNAP12004 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.71□□□□□ -1.82
PCNAP12004 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.71□□□□□ -1.82
PCNAP12004 ZYXP1-201ENST00000617638 118 ntBASIC3.71□□□□□ -1.82
PCNAP12004 AC009159.1-201ENST00000618386 642 ntBASIC3.71□□□□□ -1.82
PCNAP12004 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.71□□□□□ -1.82
PCNAP12004 AL021368.2-201ENST00000606125 5352 ntBASIC3.71□□□□□ -1.82
PCNAP12004 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PCNAP12004 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms