Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TPM1P09493 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.76□□□□□ -1.97
TPM1P09493 AC025768.1-201ENST00000510057 267 ntBASIC2.76□□□□□ -1.97
TPM1P09493 AC107222.1-201ENST00000510899 637 ntBASIC2.76□□□□□ -1.97
TPM1P09493 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.76□□□□□ -1.97
TPM1P09493 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TPM1P09493 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.76□□□□□ -1.97
TPM1P09493 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.76□□□□□ -1.97
TPM1P09493 AMZ2P1-203ENST00000565833 850 ntBASIC2.76□□□□□ -1.97
TPM1P09493 AC013444.2-201ENST00000603317 787 ntBASIC2.76□□□□□ -1.97
TPM1P09493 AC004852.3-201ENST00000614131 326 ntBASIC2.76□□□□□ -1.97
TPM1P09493 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.76□□□□□ -1.97
TPM1P09493 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.76□□□□□ -1.97
TPM1P09493 AC132825.7-201ENST00000638744 335 ntBASIC2.76□□□□□ -1.97
TPM1P09493 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
TPM1P09493 AC007336.1-201ENST00000576365 3828 ntBASIC2.75□□□□□ -1.97
TPM1P09493 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
TPM1P09493 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
TPM1P09493 SNORA71.3-201ENST00000362582 128 ntBASIC2.75□□□□□ -1.97
TPM1P09493 MIR670-201ENST00000390142 98 ntBASIC2.75□□□□□ -1.97
TPM1P09493 RPS4XP7-201ENST00000406274 780 ntBASIC2.75□□□□□ -1.97
TPM1P09493 AL513475.1-201ENST00000406602 315 ntBASIC2.75□□□□□ -1.97
TPM1P09493 U3.37-201ENST00000408528 213 ntBASIC2.75□□□□□ -1.97
TPM1P09493 RNU2-15P-201ENST00000410692 191 ntBASIC2.75□□□□□ -1.97
TPM1P09493 AF274854.1-201ENST00000413236 615 ntBASIC2.75□□□□□ -1.97
TPM1P09493 CR848007.2-201ENST00000424918 787 ntBASIC2.75□□□□□ -1.97
TPM1P09493 AC005345.1-201ENST00000431868 217 ntBASIC2.75□□□□□ -1.97
TPM1P09493 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.75□□□□□ -1.97
TPM1P09493 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.75□□□□□ -1.97
TPM1P09493 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.75□□□□□ -1.97
TPM1P09493 AC096725.1-201ENST00000514266 313 ntBASIC2.75□□□□□ -1.97
TPM1P09493 RNU6-798P-201ENST00000516912 103 ntBASIC2.75□□□□□ -1.97
TPM1P09493 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.75□□□□□ -1.97
TPM1P09493 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
TPM1P09493 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.75□□□□□ -1.97
TPM1P09493 AC104229.1-201ENST00000561364 255 ntBASIC2.75□□□□□ -1.97
TPM1P09493 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.75□□□□□ -1.97
TPM1P09493 CYCSP39-201ENST00000565821 309 ntBASIC2.75□□□□□ -1.97
TPM1P09493 AC093732.2-201ENST00000607950 274 ntBASIC2.75□□□□□ -1.97
TPM1P09493 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.75□□□□□ -1.97
TPM1P09493 MIR8057-201ENST00000620957 69 ntBASIC2.75□□□□□ -1.97
TPM1P09493 CR848007.1-201ENST00000442354 1699 ntBASIC2.75□□□□□ -1.97
TPM1P09493 PABPC1P9-201ENST00000426076 1612 ntBASIC2.75□□□□□ -1.97
TPM1P09493 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
TPM1P09493 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
TPM1P09493 AL139098.1-201ENST00000407291 389 ntBASIC2.74□□□□□ -1.97
TPM1P09493 MIR1290-201ENST00000408735 78 ntBASIC2.74□□□□□ -1.97
TPM1P09493 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.74□□□□□ -1.97
TPM1P09493 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.74□□□□□ -1.97
TPM1P09493 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.74□□□□□ -1.97
TPM1P09493 MTND4LP7-201ENST00000431728 294 ntBASIC2.74□□□□□ -1.97
TPM1P09493 AC098826.1-201ENST00000433943 471 ntBASIC2.74□□□□□ -1.97
TPM1P09493 AC024082.2-201ENST00000434771 238 ntBASIC2.74□□□□□ -1.97
TPM1P09493 AC002542.1-201ENST00000440683 193 ntBASIC2.74□□□□□ -1.97
TPM1P09493 AL513328.1-201ENST00000446460 224 ntBASIC2.74□□□□□ -1.97
TPM1P09493 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.74□□□□□ -1.97
TPM1P09493 WASF1P1-201ENST00000447560 1131 ntBASIC2.74□□□□□ -1.97
TPM1P09493 RSL24D1P3-201ENST00000449255 495 ntBASIC2.74□□□□□ -1.97
TPM1P09493 RFC5P1-201ENST00000454419 874 ntBASIC2.74□□□□□ -1.97
TPM1P09493 RNU6-420P-201ENST00000458780 107 ntBASIC2.74□□□□□ -1.97
TPM1P09493 RPL7P49-201ENST00000471402 708 ntBASIC2.74□□□□□ -1.97
TPM1P09493 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.74□□□□□ -1.97
TPM1P09493 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.74□□□□□ -1.97
TPM1P09493 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
TPM1P09493 NIFKP8-201ENST00000560500 874 ntBASIC2.74□□□□□ -1.97
TPM1P09493 SULT1C2P1-202ENST00000562418 459 ntBASIC2.74□□□□□ -1.97
TPM1P09493 MIR4325-201ENST00000583049 90 ntBASIC2.74□□□□□ -1.97
TPM1P09493 SRGNP1-201ENST00000603392 451 ntBASIC2.74□□□□□ -1.97
TPM1P09493 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.74□□□□□ -1.97
TPM1P09493 CRYM-AS1-204ENST00000637983 556 ntBASIC2.74□□□□□ -1.97
TPM1P09493 AC012321.1-201ENST00000561622 1588 ntBASIC2.74□□□□□ -1.97
TPM1P09493 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.73□□□□□ -1.97
TPM1P09493 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.73□□□□□ -1.97
TPM1P09493 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.73□□□□□ -1.97
TPM1P09493 RNU6-251P-201ENST00000363235 104 ntBASIC2.73□□□□□ -1.97
TPM1P09493 RNU6-270P-201ENST00000364131 105 ntBASIC2.73□□□□□ -1.97
TPM1P09493 RNU6-461P-201ENST00000364195 107 ntBASIC2.73□□□□□ -1.97
TPM1P09493 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.73□□□□□ -1.97
TPM1P09493 SNORA41-201ENST00000384675 132 ntBASIC2.73□□□□□ -1.97
TPM1P09493 AL356057.3-201ENST00000402607 340 ntBASIC2.73□□□□□ -1.97
TPM1P09493 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.73□□□□□ -1.97
TPM1P09493 VN1R42P-201ENST00000424651 344 ntBASIC2.73□□□□□ -1.97
TPM1P09493 AL714022.1-201ENST00000439897 151 ntBASIC2.73□□□□□ -1.97
TPM1P09493 AC104389.3-201ENST00000445629 235 ntBASIC2.73□□□□□ -1.97
TPM1P09493 NANOGNBP1-201ENST00000448444 480 ntBASIC2.73□□□□□ -1.97
TPM1P09493 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.73□□□□□ -1.97
TPM1P09493 AC087588.1-201ENST00000462203 316 ntBASIC2.73□□□□□ -1.97
TPM1P09493 AC133134.1-201ENST00000466800 359 ntBASIC2.73□□□□□ -1.97
TPM1P09493 AC116337.2-201ENST00000477662 156 ntBASIC2.73□□□□□ -1.97
TPM1P09493 AC023424.2-201ENST00000493479 777 ntBASIC2.73□□□□□ -1.97
TPM1P09493 AC109471.1-201ENST00000511631 612 ntBASIC2.73□□□□□ -1.97
TPM1P09493 RNU1-104P-201ENST00000517280 175 ntBASIC2.73□□□□□ -1.97
TPM1P09493 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.73□□□□□ -1.97
TPM1P09493 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.73□□□□□ -1.97
TPM1P09493 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.73□□□□□ -1.97
TPM1P09493 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.73□□□□□ -1.97
TPM1P09493 AC243972.3-201ENST00000539655 198 ntBASIC2.73□□□□□ -1.97
TPM1P09493 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.73□□□□□ -1.97
TPM1P09493 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.73□□□□□ -1.97
TPM1P09493 AC015688.2-201ENST00000584523 262 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms