Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 MTND5P11-201ENST00000511037 1812 ntBASIC2.26□□□□□ -2.05
HLA-DQB2P05538 AC025263.3-201ENST00000622965 1396 ntBASIC2.26□□□□□ -2.05
HLA-DQB2P05538 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.26□□□□□ -2.05
HLA-DQB2P05538 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HLA-DQB2P05538 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HLA-DQB2P05538 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.26□□□□□ -2.05
HLA-DQB2P05538 MIR649-201ENST00000384843 97 ntBASIC2.26□□□□□ -2.05
HLA-DQB2P05538 U3.37-201ENST00000408528 213 ntBASIC2.26□□□□□ -2.05
HLA-DQB2P05538 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.26□□□□□ -2.05
HLA-DQB2P05538 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.26□□□□□ -2.05
HLA-DQB2P05538 AC099677.1-201ENST00000420575 175 ntBASIC2.26□□□□□ -2.05
HLA-DQB2P05538 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.26□□□□□ -2.05
HLA-DQB2P05538 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.26□□□□□ -2.05
HLA-DQB2P05538 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.26□□□□□ -2.05
HLA-DQB2P05538 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.26□□□□□ -2.05
HLA-DQB2P05538 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.26□□□□□ -2.05
HLA-DQB2P05538 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.26□□□□□ -2.05
HLA-DQB2P05538 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC2.26□□□□□ -2.05
HLA-DQB2P05538 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.26□□□□□ -2.05
HLA-DQB2P05538 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.26□□□□□ -2.05
HLA-DQB2P05538 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.26□□□□□ -2.05
HLA-DQB2P05538 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.26□□□□□ -2.05
HLA-DQB2P05538 AC245036.5-201ENST00000596330 847 ntBASIC2.26□□□□□ -2.05
HLA-DQB2P05538 VN1R88P-201ENST00000596787 292 ntBASIC2.26□□□□□ -2.05
HLA-DQB2P05538 AC106791.2-201ENST00000604680 391 ntBASIC2.26□□□□□ -2.05
HLA-DQB2P05538 AL133507.1-201ENST00000605269 557 ntBASIC2.26□□□□□ -2.05
HLA-DQB2P05538 MIR6076-201ENST00000617521 113 ntBASIC2.26□□□□□ -2.05
HLA-DQB2P05538 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.26□□□□□ -2.05
HLA-DQB2P05538 AC007275.1-201ENST00000621243 671 ntBASIC2.26□□□□□ -2.05
HLA-DQB2P05538 AL353748.2-201ENST00000622148 471 ntBASIC2.26□□□□□ -2.05
HLA-DQB2P05538 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.26□□□□□ -2.05
HLA-DQB2P05538 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HLA-DQB2P05538 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HLA-DQB2P05538 AC130650.2-201ENST00000618736 2403 ntBASIC2.25□□□□□ -2.05
HLA-DQB2P05538 RNU6-1180P-201ENST00000364935 107 ntBASIC2.25□□□□□ -2.05
HLA-DQB2P05538 Y_RNA.500-201ENST00000384466 111 ntBASIC2.25□□□□□ -2.05
HLA-DQB2P05538 RNU6-1005P-201ENST00000384519 107 ntBASIC2.25□□□□□ -2.05
HLA-DQB2P05538 RNA5SP252-201ENST00000391131 119 ntBASIC2.25□□□□□ -2.05
HLA-DQB2P05538 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HLA-DQB2P05538 AL356057.2-201ENST00000403318 432 ntBASIC2.25□□□□□ -2.05
HLA-DQB2P05538 HMGB1P11-201ENST00000413899 637 ntBASIC2.25□□□□□ -2.05
HLA-DQB2P05538 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.25□□□□□ -2.05
HLA-DQB2P05538 Z93242.1-201ENST00000427102 353 ntBASIC2.25□□□□□ -2.05
HLA-DQB2P05538 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.25□□□□□ -2.05
HLA-DQB2P05538 AC092427.1-202ENST00000430569 476 ntBASIC2.25□□□□□ -2.05
HLA-DQB2P05538 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.25□□□□□ -2.05
HLA-DQB2P05538 MYL8P-204ENST00000431574 518 ntBASIC2.25□□□□□ -2.05
HLA-DQB2P05538 EEF1B2P7-201ENST00000451177 676 ntBASIC2.25□□□□□ -2.05
HLA-DQB2P05538 HMGN3P1-201ENST00000453847 193 ntBASIC2.25□□□□□ -2.05
HLA-DQB2P05538 MTND2P6-201ENST00000455337 1030 ntBASIC2.25□□□□□ -2.05
HLA-DQB2P05538 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.25□□□□□ -2.05
HLA-DQB2P05538 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.25□□□□□ -2.05
HLA-DQB2P05538 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.25□□□□□ -2.05
HLA-DQB2P05538 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.25□□□□□ -2.05
HLA-DQB2P05538 AC018630.1-201ENST00000541376 925 ntBASIC2.25□□□□□ -2.05
HLA-DQB2P05538 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.25□□□□□ -2.05
HLA-DQB2P05538 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.25□□□□□ -2.05
HLA-DQB2P05538 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.25□□□□□ -2.05
HLA-DQB2P05538 ATP5F1P7-201ENST00000567330 760 ntBASIC2.25□□□□□ -2.05
HLA-DQB2P05538 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.25□□□□□ -2.05
HLA-DQB2P05538 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.25□□□□□ -2.05
HLA-DQB2P05538 AC019159.1-201ENST00000605094 187 ntBASIC2.25□□□□□ -2.05
HLA-DQB2P05538 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.25□□□□□ -2.05
HLA-DQB2P05538 AC006329.2-201ENST00000611491 394 ntBASIC2.25□□□□□ -2.05
HLA-DQB2P05538 AC016911.1-201ENST00000613297 452 ntBASIC2.25□□□□□ -2.05
HLA-DQB2P05538 AL138880.2-201ENST00000616214 239 ntBASIC2.25□□□□□ -2.05
HLA-DQB2P05538 AC009831.4-201ENST00000620744 325 ntBASIC2.25□□□□□ -2.05
HLA-DQB2P05538 AC011460.1-201ENST00000636268 1834 ntBASIC2.25□□□□□ -2.05
HLA-DQB2P05538 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.25□□□□□ -2.05
HLA-DQB2P05538 AL512283.1-201ENST00000606756 1384 ntBASIC2.24□□□□□ -2.05
HLA-DQB2P05538 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HLA-DQB2P05538 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HLA-DQB2P05538 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
HLA-DQB2P05538 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HLA-DQB2P05538 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
HLA-DQB2P05538 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
HLA-DQB2P05538 RPS4XP3-201ENST00000398541 413 ntBASIC2.24□□□□□ -2.05
HLA-DQB2P05538 UBE2V1P11-201ENST00000411559 285 ntBASIC2.24□□□□□ -2.05
HLA-DQB2P05538 HMGN2P30-201ENST00000423237 256 ntBASIC2.24□□□□□ -2.05
HLA-DQB2P05538 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.24□□□□□ -2.05
HLA-DQB2P05538 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.24□□□□□ -2.05
HLA-DQB2P05538 MTND4LP14-201ENST00000429447 288 ntBASIC2.24□□□□□ -2.05
HLA-DQB2P05538 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.24□□□□□ -2.05
HLA-DQB2P05538 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.24□□□□□ -2.05
HLA-DQB2P05538 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.24□□□□□ -2.05
HLA-DQB2P05538 AL590664.1-201ENST00000448065 339 ntBASIC2.24□□□□□ -2.05
HLA-DQB2P05538 MTND2P19-201ENST00000449129 1012 ntBASIC2.24□□□□□ -2.05
HLA-DQB2P05538 AC234775.1-201ENST00000454247 670 ntBASIC2.24□□□□□ -2.05
HLA-DQB2P05538 AC104108.1-201ENST00000509930 412 ntBASIC2.24□□□□□ -2.05
HLA-DQB2P05538 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.24□□□□□ -2.05
HLA-DQB2P05538 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.24□□□□□ -2.05
HLA-DQB2P05538 PRELID3BP4-201ENST00000515476 571 ntBASIC2.24□□□□□ -2.05
HLA-DQB2P05538 AC087373.1-201ENST00000524920 491 ntBASIC2.24□□□□□ -2.05
HLA-DQB2P05538 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.24□□□□□ -2.05
HLA-DQB2P05538 AC024224.1-201ENST00000538284 609 ntBASIC2.24□□□□□ -2.05
HLA-DQB2P05538 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HLA-DQB2P05538 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.24□□□□□ -2.05
HLA-DQB2P05538 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
HLA-DQB2P05538 NUTF2P8-201ENST00000604593 363 ntBASIC2.24□□□□□ -2.05
HLA-DQB2P05538 AC106900.2-201ENST00000604994 317 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms