Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC090453.1-201ENST00000495560 436 ntBASIC3.1□□□□□ -1.91
MT-ND1P03886 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.1□□□□□ -1.91
MT-ND1P03886 COX7A2P2-201ENST00000505291 250 ntBASIC3.1□□□□□ -1.91
MT-ND1P03886 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.1□□□□□ -1.91
MT-ND1P03886 AC010486.3-201ENST00000511602 785 ntBASIC3.1□□□□□ -1.91
MT-ND1P03886 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.1□□□□□ -1.91
MT-ND1P03886 SNORD59.2-201ENST00000516873 68 ntBASIC3.1□□□□□ -1.91
MT-ND1P03886 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
MT-ND1P03886 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.1□□□□□ -1.91
MT-ND1P03886 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.1□□□□□ -1.91
MT-ND1P03886 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.1□□□□□ -1.91
MT-ND1P03886 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.1□□□□□ -1.91
MT-ND1P03886 AC109446.2-201ENST00000567872 497 ntBASIC3.1□□□□□ -1.91
MT-ND1P03886 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.1□□□□□ -1.91
MT-ND1P03886 AC013444.2-201ENST00000603317 787 ntBASIC3.1□□□□□ -1.91
MT-ND1P03886 AC106900.2-201ENST00000604994 317 ntBASIC3.1□□□□□ -1.91
MT-ND1P03886 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.1□□□□□ -1.91
MT-ND1P03886 AL031667.3-201ENST00000620124 655 ntBASIC3.1□□□□□ -1.91
MT-ND1P03886 AC073476.4-201ENST00000628409 72 ntBASIC3.1□□□□□ -1.91
MT-ND1P03886 AC127502.3-201ENST00000636170 1206 ntBASIC3.1□□□□□ -1.91
MT-ND1P03886 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.1□□□□□ -1.91
MT-ND1P03886 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
MT-ND1P03886 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
MT-ND1P03886 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.1□□□□□ -1.91
MT-ND1P03886 CUL1P1-201ENST00000509510 2425 ntBASIC3.1□□□□□ -1.91
MT-ND1P03886 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
MT-ND1P03886 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
MT-ND1P03886 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
MT-ND1P03886 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.09□□□□□ -1.91
MT-ND1P03886 AC012321.1-201ENST00000561622 1588 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
MT-ND1P03886 RNA5SP119-201ENST00000362715 117 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 U3.6-201ENST00000363622 211 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 RNU6-553P-201ENST00000364047 96 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 U3.11-201ENST00000364476 212 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
MT-ND1P03886 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
MT-ND1P03886 AL359837.1-201ENST00000381357 287 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
MT-ND1P03886 RNU1-101P-201ENST00000391171 127 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.09□□□□□ -1.91
MT-ND1P03886 TPMTP2-201ENST00000414372 726 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
MT-ND1P03886 AC019178.2-201ENST00000423595 505 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 AL035407.1-201ENST00000429211 571 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 EZH2P1-201ENST00000431167 291 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 AL445584.1-201ENST00000431451 330 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.09□□□□□ -1.91
MT-ND1P03886 RPL23AP35-201ENST00000451906 501 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 USP9YP10-201ENST00000454868 628 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 RN7SL75P-201ENST00000461926 281 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.09□□□□□ -1.91
MT-ND1P03886 AC025518.1-201ENST00000479856 347 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 ACTR3P3-201ENST00000480448 893 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.09□□□□□ -1.91
MT-ND1P03886 AC114981.1-201ENST00000503897 678 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.09□□□□□ -1.91
MT-ND1P03886 AC111000.2-201ENST00000507775 550 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.09□□□□□ -1.91
MT-ND1P03886 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.09□□□□□ -1.91
MT-ND1P03886 AC118465.1-201ENST00000513820 1271 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.09□□□□□ -1.91
MT-ND1P03886 MTND4LP31-201ENST00000514859 294 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 RNA5SP217-201ENST00000515959 91 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 RNU1-95P-201ENST00000516357 160 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 RNU1-128P-201ENST00000516704 160 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.09□□□□□ -1.91
MT-ND1P03886 AC103843.2-201ENST00000530523 682 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.09□□□□□ -1.91
MT-ND1P03886 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.09□□□□□ -1.91
MT-ND1P03886 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.09□□□□□ -1.91
MT-ND1P03886 AC053481.3-201ENST00000577881 843 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.09□□□□□ -1.91
MT-ND1P03886 Z99497.2-201ENST00000603634 310 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 AL022099.1-201ENST00000604551 712 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 AL031176.1-201ENST00000604554 466 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 AC012443.1-201ENST00000605605 231 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 AC080013.4-201ENST00000607624 649 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 AC009570.1-201ENST00000609599 745 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 AC004223.4-201ENST00000612426 332 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 AL121772.2-201ENST00000614331 297 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 AC048344.4-201ENST00000619744 527 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
MT-ND1P03886 AL356596.1-201ENST00000624230 379 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 AC091903.1-201ENST00000624322 454 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 AC092192.1-201ENST00000633154 1018 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 AL513185.3-201ENST00000433335 1300 ntBASIC3.09□□□□□ -1.91
MT-ND1P03886 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
MT-ND1P03886 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
MT-ND1P03886 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
MT-ND1P03886 AL022578.1-201ENST00000439330 1433 ntBASIC3.09□□□□□ -1.92
MT-ND1P03886 AC110774.1-201ENST00000623567 2018 ntBASIC3.09□□□□□ -1.92
MT-ND1P03886 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.09□□□□□ -1.92
MT-ND1P03886 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
MT-ND1P03886 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
MT-ND1P03886 ZNF285B-201ENST00000561698 1767 ntBASIC3.08□□□□□ -1.92
MT-ND1P03886 AC093010.3-201ENST00000570269 15214 ntBASIC3.08□□□□□ -1.92
MT-ND1P03886 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.08□□□□□ -1.92
MT-ND1P03886 RPL21P132-201ENST00000331267 462 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 155.1 ms